RNA–Protein interactions for RNA: ENST00000527769.5

PAX6-221, Transcript of paired box 6, humanhuman

TSL 3

Gene PAX6, Length 487 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-221ENST00000527769 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
PAX6-221ENST00000527769 ROBO1Q9Y6N7 1651 aa13.05□□□□□ -0.32
PAX6-221ENST00000527769 SLIT3O75094 1523 aa13.05□□□□□ -0.32
PAX6-221ENST00000527769 SPATA31A3Q5VYP0 1347 aa13.05□□□□□ -0.32
PAX6-221ENST00000527769 RTL1A6NKG5 1358 aa13.05□□□□□ -0.32
PAX6-221ENST00000527769 FLT4P35916 1363 aa13.05□□□□□ -0.32
PAX6-221ENST00000527769 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
PAX6-221ENST00000527769 PDCD7Q8N8D1 485 aaKnown RBP13.04□□□□□ -0.32
PAX6-221ENST00000527769 ZBED9Q6R2W3 1325 aa13.04□□□□□ -0.32
PAX6-221ENST00000527769 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
PAX6-221ENST00000527769 GCP02774 474 aa13.03□□□□□ -0.32
PAX6-221ENST00000527769 U2AF1L5P0DN76 240 aaPredicted RBP13.03□□□□□ -0.32
PAX6-221ENST00000527769 U2AF1Q01081 240 aaKnown RBP eCLIP13.03□□□□□ -0.32
PAX6-221ENST00000527769 XPCQ01831 940 aaPredicted RBP13.03□□□□□ -0.32
PAX6-221ENST00000527769 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
PAX6-221ENST00000527769 NUTM2GQ5VZR2 741 aa13.03□□□□□ -0.32
PAX6-221ENST00000527769 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
PAX6-221ENST00000527769 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
PAX6-221ENST00000527769 USP19O94966 1318 aa13.03□□□□□ -0.32
PAX6-221ENST00000527769 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.32
PAX6-221ENST00000527769 U2SURPO15042 1029 aaKnown RBP13.02□□□□□ -0.33
PAX6-221ENST00000527769 FCHSD2O94868 740 aa13.02□□□□□ -0.33
PAX6-221ENST00000527769 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
PAX6-221ENST00000527769 MFRPQ9BY79 579 aa13.02□□□□□ -0.33
PAX6-221ENST00000527769 MAP3K19Q56UN5 1328 aa13.02□□□□□ -0.33
PAX6-221ENST00000527769 NFAT5O94916 1531 aa13.02□□□□□ -0.33
PAX6-221ENST00000527769 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.33
PAX6-221ENST00000527769 PDE3BQ13370 1112 aa13.01□□□□□ -0.33
PAX6-221ENST00000527769 ABCC6O95255 1503 aa13.01□□□□□ -0.33
PAX6-221ENST00000527769 PHLPP1O60346 1717 aa13.01□□□□□ -0.33
PAX6-221ENST00000527769 PEAK1Q9H792 1746 aa13□□□□□ -0.33
PAX6-221ENST00000527769 CRYBG1Q9Y4K1 1723 aa13□□□□□ -0.33
PAX6-221ENST00000527769 IL13P35225 146 aa13□□□□□ -0.33
PAX6-221ENST00000527769 LHX8Q68G74 356 aa13□□□□□ -0.33
PAX6-221ENST00000527769 IP6K1Q92551 441 aa13□□□□□ -0.33
PAX6-221ENST00000527769 MAPK8IP3Q9UPT6 1336 aa12.99□□□□□ -0.33
PAX6-221ENST00000527769 FBLN1P23142 703 aa12.99□□□□□ -0.33
PAX6-221ENST00000527769 FAM208AQ9UK61 1670 aaKnown RBP12.99□□□□□ -0.33
PAX6-221ENST00000527769 POTEB2H3BUK9 544 aa12.98□□□□□ -0.33
PAX6-221ENST00000527769 HOXC9P31274 260 aa12.98□□□□□ -0.33
PAX6-221ENST00000527769 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
PAX6-221ENST00000527769 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
PAX6-221ENST00000527769 ARHGEF25Q86VW2 580 aa12.98□□□□□ -0.33
PAX6-221ENST00000527769 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
PAX6-221ENST00000527769 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
PAX6-221ENST00000527769 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
PAX6-221ENST00000527769 RGPD5Q99666 1765 aa12.97□□□□□ -0.33
PAX6-221ENST00000527769 RGPD1P0DJD0 1748 aa12.97□□□□□ -0.33
PAX6-221ENST00000527769 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
PAX6-221ENST00000527769 HSP90AB2PQ58FF8 381 aa12.97□□□□□ -0.33
PAX6-221ENST00000527769 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
PAX6-221ENST00000527769 CPDO75976 1380 aa12.96□□□□□ -0.33
PAX6-221ENST00000527769 COL22A1Q8NFW1 1626 aaPredicted RBP12.96□□□□□ -0.33
PAX6-221ENST00000527769 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.33
PAX6-221ENST00000527769 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
PAX6-221ENST00000527769 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
PAX6-221ENST00000527769 ABCA3Q99758 1704 aa12.96□□□□□ -0.34
PAX6-221ENST00000527769 DPY19L2Q6NUT2 758 aa12.95□□□□□ -0.34
PAX6-221ENST00000527769 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
PAX6-221ENST00000527769 APAF1O14727 1248 aa12.94□□□□□ -0.34
PAX6-221ENST00000527769 CCDC27Q2M243 656 aa12.94□□□□□ -0.34
PAX6-221ENST00000527769 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
PAX6-221ENST00000527769 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
PAX6-221ENST00000527769 COL18A1P39060 1754 aa12.94□□□□□ -0.34
PAX6-221ENST00000527769 PLEKHF1Q96S99 279 aa12.93□□□□□ -0.34
PAX6-221ENST00000527769 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
PAX6-221ENST00000527769 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
PAX6-221ENST00000527769 IGSF1Q8N6C5 1336 aa12.92□□□□□ -0.34
PAX6-221ENST00000527769 COL16A1Q07092 1604 aaPredicted RBP12.92□□□□□ -0.34
PAX6-221ENST00000527769 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
PAX6-221ENST00000527769 G3V3G9 751 aa12.92□□□□□ -0.34
PAX6-221ENST00000527769 ZC3H6P61129 1189 aaKnown RBP12.92□□□□□ -0.34
PAX6-221ENST00000527769 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
PAX6-221ENST00000527769 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
PAX6-221ENST00000527769 SULT6B1Q6IMI4 303 aa12.92□□□□□ -0.34
PAX6-221ENST00000527769 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
PAX6-221ENST00000527769 CALD1Q05682 793 aaKnown RBP12.91□□□□□ -0.34
PAX6-221ENST00000527769 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
PAX6-221ENST00000527769 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.91□□□□□ -0.34
PAX6-221ENST00000527769 RGPD2P0DJD1 1756 aa12.91□□□□□ -0.34
PAX6-221ENST00000527769 KDRP35968 1356 aa12.91□□□□□ -0.34
PAX6-221ENST00000527769 COL14A1Q05707 1796 aaKnown RBP12.9□□□□□ -0.34
PAX6-221ENST00000527769 HMOX1P09601 288 aa12.9□□□□□ -0.34
PAX6-221ENST00000527769 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
PAX6-221ENST00000527769 TMPOP42166 694 aaKnown RBP12.9□□□□□ -0.34
PAX6-221ENST00000527769 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
PAX6-221ENST00000527769 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
PAX6-221ENST00000527769 EYA1Q99502 592 aa12.9□□□□□ -0.34
PAX6-221ENST00000527769 PRDM11Q9NQV5 511 aa12.9□□□□□ -0.34
PAX6-221ENST00000527769 ANKRD24Q8TF21 1146 aa12.89□□□□□ -0.35
PAX6-221ENST00000527769 LTV1Q96GA3 475 aaPredicted RBP12.89□□□□□ -0.35
PAX6-221ENST00000527769 BOLA1Q9Y3E2 137 aa12.89□□□□□ -0.35
PAX6-221ENST00000527769 SALL2Q9Y467 1007 aaPredicted RBP12.89□□□□□ -0.35
PAX6-221ENST00000527769 KIAA0232Q92628 1395 aa12.89□□□□□ -0.35
PAX6-221ENST00000527769 PLEKHG2Q9H7P9 1386 aa12.89□□□□□ -0.35
PAX6-221ENST00000527769 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
PAX6-221ENST00000527769 RIPK4P57078 832 aa12.88□□□□□ -0.35
PAX6-221ENST00000527769 NFE2L2Q16236 605 aa12.88□□□□□ -0.35
PAX6-221ENST00000527769 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
PAX6-221ENST00000527769 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms