RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 LMOD3Q0VAK6 560 aa11.96□□□□□ -0.5
CDC27-204ENST00000527547 MYH16Q9H6N6 1097 aa11.96□□□□□ -0.5
CDC27-204ENST00000527547 MEGF6O75095 1541 aa11.96□□□□□ -0.5
CDC27-204ENST00000527547 PLIN1O60240 522 aa11.95□□□□□ -0.5
CDC27-204ENST00000527547 EXOSC9Q06265 439 aaKnown RBP11.95□□□□□ -0.5
CDC27-204ENST00000527547 GNAT3A8MTJ3 354 aa11.95□□□□□ -0.5
CDC27-204ENST00000527547 ZNF530Q6P9A1 599 aaPredicted RBP11.95□□□□□ -0.5
CDC27-204ENST00000527547 RAPGEF4Q8WZA2 1011 aa11.95□□□□□ -0.5
CDC27-204ENST00000527547 RTF1Q92541 710 aaKnown RBP11.95□□□□□ -0.5
CDC27-204ENST00000527547 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
CDC27-204ENST00000527547 IL16Q14005 1332 aa11.94□□□□□ -0.5
CDC27-204ENST00000527547 HSPA1LP34931 641 aa11.94□□□□□ -0.5
CDC27-204ENST00000527547 MBIPQ9NS73 344 aa11.94□□□□□ -0.5
CDC27-204ENST00000527547 NEFLP07196 543 aa11.94□□□□□ -0.5
CDC27-204ENST00000527547 PLEKHO1Q53GL0 409 aaPredicted RBP11.94□□□□□ -0.5
CDC27-204ENST00000527547 IL17REQ8NFR9 667 aa11.94□□□□□ -0.5
CDC27-204ENST00000527547 LGR6Q9HBX8 967 aa11.94□□□□□ -0.5
CDC27-204ENST00000527547 MAP3K5Q99683 1374 aa11.94□□□□□ -0.5
CDC27-204ENST00000527547 BCAR3O75815 825 aa11.93□□□□□ -0.5
CDC27-204ENST00000527547 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
CDC27-204ENST00000527547 MPRIPQ6WCQ1 1025 aa11.93□□□□□ -0.5
CDC27-204ENST00000527547 CRB1P82279 1406 aa11.93□□□□□ -0.5
CDC27-204ENST00000527547 ELL2O00472 640 aaPredicted RBP11.92□□□□□ -0.5
CDC27-204ENST00000527547 TATP17735 454 aaPredicted RBP11.92□□□□□ -0.5
CDC27-204ENST00000527547 RRP1P56182 461 aaKnown RBP11.92□□□□□ -0.5
CDC27-204ENST00000527547 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
CDC27-204ENST00000527547 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
CDC27-204ENST00000527547 IFT57Q9NWB7 429 aa11.92□□□□□ -0.5
CDC27-204ENST00000527547 RNF123Q5XPI4 1314 aa11.92□□□□□ -0.5
CDC27-204ENST00000527547 COL14A1Q05707 1796 aaKnown RBP11.92□□□□□ -0.5
CDC27-204ENST00000527547 GNAI1P63096 354 aa11.92□□□□□ -0.5
CDC27-204ENST00000527547 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
CDC27-204ENST00000527547 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
CDC27-204ENST00000527547 AMOTQ4VCS5 1084 aa11.91□□□□□ -0.5
CDC27-204ENST00000527547 TSPYL6Q8N831 410 aa11.91□□□□□ -0.5
CDC27-204ENST00000527547 JCADQ9P266 1359 aa11.91□□□□□ -0.5
CDC27-204ENST00000527547 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
CDC27-204ENST00000527547 AKAP4Q5JQC9 854 aa11.9□□□□□ -0.5
CDC27-204ENST00000527547 C1orf141Q5JVX7 400 aa11.9□□□□□ -0.5
CDC27-204ENST00000527547 PLCH1Q4KWH8 1693 aa11.9□□□□□ -0.5
CDC27-204ENST00000527547 C8orf58Q8NAV2 365 aa11.9□□□□□ -0.5
CDC27-204ENST00000527547 CHL1O00533 1208 aa11.89□□□□□ -0.51
CDC27-204ENST00000527547 HTATSF1O43719 755 aaKnown RBP11.89□□□□□ -0.51
CDC27-204ENST00000527547 RARSP54136 660 aaKnown RBP11.89□□□□□ -0.51
CDC27-204ENST00000527547 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
CDC27-204ENST00000527547 CYP27B1O15528 508 aa11.89□□□□□ -0.51
CDC27-204ENST00000527547 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
CDC27-204ENST00000527547 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
CDC27-204ENST00000527547 IL2RBP14784 551 aa11.88□□□□□ -0.51
CDC27-204ENST00000527547 TSPYL4Q9UJ04 414 aa11.88□□□□□ -0.51
CDC27-204ENST00000527547 SPG7Q9UQ90 795 aa11.88□□□□□ -0.51
CDC27-204ENST00000527547 LRP6O75581 1613 aa11.88□□□□□ -0.51
CDC27-204ENST00000527547 RNMTO43148 476 aaKnown RBP11.88□□□□□ -0.51
CDC27-204ENST00000527547 PHKG2P15735 406 aa11.88□□□□□ -0.51
CDC27-204ENST00000527547 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
CDC27-204ENST00000527547 LRRC37A3O60309 1634 aa11.88□□□□□ -0.51
CDC27-204ENST00000527547 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
CDC27-204ENST00000527547 FRAT1Q92837 279 aaPredicted RBP11.87□□□□□ -0.51
CDC27-204ENST00000527547 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
CDC27-204ENST00000527547 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
CDC27-204ENST00000527547 SSH1Q8WYL5 1049 aa11.86□□□□□ -0.51
CDC27-204ENST00000527547 NGLY1Q96IV0 654 aa11.86□□□□□ -0.51
CDC27-204ENST00000527547 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
CDC27-204ENST00000527547 KCNQ3O43525 872 aa11.86□□□□□ -0.51
CDC27-204ENST00000527547 VAMP4O75379 141 aa11.86□□□□□ -0.51
CDC27-204ENST00000527547 TAF7Q15545 349 aaPredicted RBP11.86□□□□□ -0.51
CDC27-204ENST00000527547 TWISTNBQ3B726 338 aaPredicted RBP11.86□□□□□ -0.51
CDC27-204ENST00000527547 IFNL2Q8IZJ0 200 aa11.86□□□□□ -0.51
CDC27-204ENST00000527547 TNNQ9UQP3 1299 aa11.86□□□□□ -0.51
CDC27-204ENST00000527547 CCDC9Q9Y3X0 531 aaKnown RBP11.86□□□□□ -0.51
CDC27-204ENST00000527547 PKD1L3Q7Z443 1732 aa11.86□□□□□ -0.51
CDC27-204ENST00000527547 NRAPQ86VF7 1730 aa11.85□□□□□ -0.51
CDC27-204ENST00000527547 TEFQ10587 303 aa11.85□□□□□ -0.51
CDC27-204ENST00000527547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.517e-7■■■■□ 20.4
CDC27-204ENST00000527547 SLIT2O94813 1529 aa11.85□□□□□ -0.51
CDC27-204ENST00000527547 VIRMAQ69YN4 1812 aaKnown RBP11.85□□□□□ -0.51
CDC27-204ENST00000527547 PARP4Q9UKK3 1724 aaKnown RBP11.85□□□□□ -0.51
CDC27-204ENST00000527547 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
CDC27-204ENST00000527547 SPATA31A6Q5VVP1 1343 aa11.84□□□□□ -0.51
CDC27-204ENST00000527547 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
CDC27-204ENST00000527547 SPATA31A1Q5TZJ5 1347 aa11.84□□□□□ -0.51
CDC27-204ENST00000527547 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
CDC27-204ENST00000527547 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
CDC27-204ENST00000527547 NFATC2IPQ8NCF5 419 aa11.83□□□□□ -0.52
CDC27-204ENST00000527547 SHANK3Q9BYB0 1731 aa11.83□□□□□ -0.52
CDC27-204ENST00000527547 BCL9LQ86UU0 1499 aa11.83□□□□□ -0.52
CDC27-204ENST00000527547 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
CDC27-204ENST00000527547 PCDH11YQ9BZA8 1340 aa11.83□□□□□ -0.52
CDC27-204ENST00000527547 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
CDC27-204ENST00000527547 MEX3CQ5U5Q3 659 aaKnown RBP11.82□□□□□ -0.52
CDC27-204ENST00000527547 UNC5CLQ8IV45 518 aa11.82□□□□□ -0.52
CDC27-204ENST00000527547 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
CDC27-204ENST00000527547 CRBNQ96SW2 442 aa11.82□□□□□ -0.52
CDC27-204ENST00000527547 DISP2A7MBM2 1401 aa11.82□□□□□ -0.52
CDC27-204ENST00000527547 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
CDC27-204ENST00000527547 CLUAP1Q96AJ1 413 aa11.82□□□□□ -0.52
CDC27-204ENST00000527547 SPATA31A5Q5VU36 1347 aa11.82□□□□□ -0.52
CDC27-204ENST00000527547 SPATA31A7Q8IWB4 1347 aa11.82□□□□□ -0.52
CDC27-204ENST00000527547 PANK1Q8TE04 598 aa11.81□□□□□ -0.52
CDC27-204ENST00000527547 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms