RNA–Protein interactions for RNA: ENST00000526664.5

PDE4DIP-223, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-223	ENST00000526664	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.28	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	RGPD4	Q7Z3J3	1758 aa		13.28	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	IL13	P35225	146 aa		13.28	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	BAG6	P46379	1132 aa		13.28	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	MTHFS	P49914	203 aa		13.28	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	EZH2	Q15910	746 aa	Known RBP	13.28	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	ZCRB1	Q8TBF4	217 aa	Known RBP	13.28	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	CYP27B1	O15528	508 aa		13.27	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	PROM2	Q8N271	834 aa		13.27	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	KDR	P35968	1356 aa		13.27	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	PLSCR1	O15162	318 aa		13.26	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	APBA3	O96018	575 aa		13.26	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	SF3B2	Q13435	895 aa	Known RBP	13.26	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	NUP188	Q5SRE5	1749 aa		13.26	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	BTAF1	O14981	1849 aa		13.25	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	TOGARAM1	Q9Y4F4	1720 aa		13.25	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	PARD3	Q8TEW0	1356 aa		13.25	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	PLEKHG2	Q9H7P9	1386 aa		13.25	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	TAT	P17735	454 aa	Predicted RBP	13.25	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	ZEB1	P37275	1124 aa	Predicted RBP	13.25	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	AEBP1	Q8IUX7	1158 aa		13.25	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	RAPGEF4	Q8WZA2	1011 aa		13.25	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	DOT1L	Q8TEK3	1739 aa		13.25	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	DDX54	Q8TDD1	881 aa	Known RBP	13.24	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	ACSBG1	Q96GR2	724 aa		13.24	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	KAT6B	Q8WYB5	2073 aa		13.24	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	NKX1-1	Q15270	411 aa	Predicted RBP	13.23	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	SRCAP	Q6ZRS2	3230 aa		13.22	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	PPP2R1A	P30153	589 aa		13.22	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	PCDH11X	Q9BZA7	1347 aa		13.21	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	PCDH11Y	Q9BZA8	1340 aa		13.21	□□□□□ -0.29
PDE4DIP-223	ENST00000526664	ITGB4	P16144	1822 aa		13.2	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	PRIM1	P49642	420 aa	Known RBP	13.2	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	DDX10	Q13206	875 aa	Known RBP	13.2	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	CNGB1	Q14028	1251 aa	Predicted RBP	13.2	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	PAPPA	Q13219	1627 aa		13.2	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	LY75	O60449	1722 aa		13.19	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	PHKG2	P15735	406 aa		13.19	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	SULT6B1	Q6IMI4	303 aa		13.19	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	DIAPH1	O60610	1272 aa	Known RBP	13.18	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	TXNRD1	Q16881	649 aa		13.18	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.18	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	KDM6A	O15550	1401 aa	Predicted RBP	13.17	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	LRRC4B	Q9NT99	713 aa		13.17	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	SPG7	Q9UQ90	795 aa		13.17	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	IFNL2	Q8IZJ0	200 aa		13.16	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	ADAMTS7	Q9UKP4	1686 aa		13.15	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	PSD	A5PKW4	1024 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	HMOX1	P09601	288 aa		13.15	□□□□□ -0.3
PDE4DIP-223	ENST00000526664	R3HDM1	Q15032	1099 aa	Known RBP	13.14	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	AMOT	Q4VCS5	1084 aa		13.14	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.14	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	PIGB	Q92521	554 aa		13.14	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	SCN11A	Q9UI33	1791 aa		13.13	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	CASZ1	Q86V15	1759 aa		13.12	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	VIRMA	Q69YN4	1812 aa	Known RBP	13.12	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	MTHFSD	Q2M296	383 aa	Known RBP	13.12	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.12	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	SYTL4	Q96C24	671 aa	Predicted RBP	13.12	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	RSPH6A	Q9H0K4	717 aa		13.12	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	TAF1L	Q8IZX4	1826 aa		13.11	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	KCNQ4	P56696	695 aa		13.11	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	RALBP1	Q15311	655 aa		13.11	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	ZNF827	Q17R98	1081 aa		13.11	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	MPRIP	Q6WCQ1	1025 aa		13.11	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	DCAF5	Q96JK2	942 aa		13.11	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	PHACTR3	Q96KR7	559 aa		13.11	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.11	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	ERVV-2	B6SEH9	535 aa		13.1	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	SLC27A3	Q5K4L6	730 aa		13.1	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	AKT1S1	Q96B36	256 aa		13.1	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	TUBGCP6	Q96RT7	1819 aa		13.1	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	MRC1	P22897	1456 aa		13.1	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	PALLD	Q8WX93	1383 aa		13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	U2SURP	O15042	1029 aa	Known RBP	13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	SLC15A2	Q16348	729 aa		13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	AKAP4	Q5JQC9	854 aa		13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	CFAP53	Q96M91	514 aa		13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	SLC4A9	Q96Q91	983 aa		13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	LGR6	Q9HBX8	967 aa		13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	ASAP1	Q9ULH1	1129 aa		13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	LRP5	O75197	1615 aa		13.09	□□□□□ -0.31
PDE4DIP-223	ENST00000526664	QSER1	Q2KHR3	1735 aa		13.08	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	HSP90AB1	P08238	724 aa	Known RBP	13.08	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	NBPF14	Q5TI25	921 aa		13.08	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	ATG3	Q9NT62	314 aa		13.08	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	PRKAR2B	P31323	418 aa		13.07	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	TMOD3	Q9NYL9	352 aa		13.07	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	C5	P01031	1676 aa		13.07	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	ZNF831	Q5JPB2	1677 aa		13.07	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	RNMT	O43148	476 aa	Known RBP	13.06	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	FCHSD2	O94868	740 aa		13.06	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	IL17RE	Q8NFR9	667 aa		13.06	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	PLEKHF1	Q96S99	279 aa		13.06	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	CCNL1	Q9UK58	526 aa	Predicted RBP	13.06	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	SIPA1L3	O60292	1781 aa	Predicted RBP	13.06	□□□□□ -0.32
PDE4DIP-223	ENST00000526664	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.06	□□□□□ -0.32

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