RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 RAI14Q9P0K7 980 aa9.92□□□□□ -0.82
CHD7-203ENST00000525508 LRP2BPQ9P2M1 347 aa9.92□□□□□ -0.82
CHD7-203ENST00000525508 ACEP12821 1306 aa9.92□□□□□ -0.82
CHD7-203ENST00000525508 TPM2P07951 284 aa9.91□□□□□ -0.82
CHD7-203ENST00000525508 STK38Q15208 465 aa9.91□□□□□ -0.82
CHD7-203ENST00000525508 ANKRD20A12PQ8NF67 263 aa9.91□□□□□ -0.82
CHD7-203ENST00000525508 NAP1L1P55209 391 aaKnown RBP9.91□□□□□ -0.82
CHD7-203ENST00000525508 CCDC47Q96A33 483 aaKnown RBP9.91□□□□□ -0.82
CHD7-203ENST00000525508 CWC22Q9HCG8 908 aaKnown RBP9.91□□□□□ -0.82
CHD7-203ENST00000525508 ZNF219Q9P2Y4 722 aaPredicted RBP9.91□□□□□ -0.82
CHD7-203ENST00000525508 PTPRKQ15262 1439 aa9.91□□□□□ -0.82
CHD7-203ENST00000525508 KINO60870 393 aaKnown RBP9.91□□□□□ -0.82
CHD7-203ENST00000525508 RPAP2Q8IXW5 612 aaPredicted RBP9.91□□□□□ -0.82
CHD7-203ENST00000525508 CABLES1Q8TDN4 633 aa9.91□□□□□ -0.82
CHD7-203ENST00000525508 ME1P48163 572 aa9.91□□□□□ -0.82
CHD7-203ENST00000525508 METTL24Q5JXM2 366 aa9.91□□□□□ -0.82
CHD7-203ENST00000525508 ZSCAN29Q8IWY8 852 aaPredicted RBP9.91□□□□□ -0.82
CHD7-203ENST00000525508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHD7-203ENST00000525508 TDO2P48775 406 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 AEBP1Q8IUX7 1158 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 TMOD3Q9NYL9 352 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 PTPN23Q9H3S7 1636 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 K7ELQ4 463 aaPredicted RBP9.9□□□□□ -0.82
CHD7-203ENST00000525508 KRT28Q7Z3Y7 464 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 C14orf93Q9H972 538 aaKnown RBP9.9□□□□□ -0.82
CHD7-203ENST00000525508 SNRKQ9NRH2 765 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 POGZQ7Z3K3 1410 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 CT47B1P0C2W7 299 aaPredicted RBP9.9□□□□□ -0.82
CHD7-203ENST00000525508 XBP1P17861 261 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 GOLGA6L1Q8N7Z2 621 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 NGLY1Q96IV0 654 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 HOOK1Q9UJC3 728 aaKnown RBP9.9□□□□□ -0.82
CHD7-203ENST00000525508 FBXO3Q9UK99 471 aa9.9□□□□□ -0.82
CHD7-203ENST00000525508 FAM43AQ8N2R8 423 aa9.9□□□□□ -0.83
CHD7-203ENST00000525508 A0A087WZG4 1122 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 PI4KAP2A4QPH2 592 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 PDCP20941 246 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 PI4KAP1Q8N8J0 262 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHD7-203ENST00000525508 GNL3LQ9NVN8 582 aaKnown RBP9.89□□□□□ -0.83
CHD7-203ENST00000525508 STARD3NLO95772 234 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 CASTP20810 708 aaKnown RBP9.89□□□□□ -0.83
CHD7-203ENST00000525508 BRMS1Q9HCU9 246 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 FANCAO15360 1455 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 HIP1O00291 1037 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 MX1P20591 662 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 FLIIQ13045 1269 aa9.89□□□□□ -0.83
CHD7-203ENST00000525508 PRPF40BQ6NWY9 871 aaKnown RBP9.89□□□□□ -0.83
CHD7-203ENST00000525508 SMC2O95347 1197 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 ZHX3Q9H4I2 956 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 TNNQ9UQP3 1299 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 R3HCC1Q9Y3T6 440 aaKnown RBP9.88□□□□□ -0.83
CHD7-203ENST00000525508 MINDY4BA8MYZ0 360 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 HSPA2P54652 639 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 KRT24Q2M2I5 525 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 MBIPQ9NS73 344 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 IGHDP01880 384 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 PDRG1Q9NUG6 133 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 OFD1O75665 1012 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 GUCY1B3Q02153 619 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 UBE3BQ7Z3V4 1068 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 NACAP1Q9BZK3 213 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 WWC3Q9ULE0 1092 aa9.88□□□□□ -0.83
CHD7-203ENST00000525508 CCDC83Q8IWF9 413 aa9.87□□□□□ -0.83
CHD7-203ENST00000525508 DNAAF4Q8WXU2 420 aa9.87□□□□□ -0.83
CHD7-203ENST00000525508 KIF1BPQ96EK5 621 aa9.87□□□□□ -0.83
CHD7-203ENST00000525508 TRMT112Q9UI30 125 aaKnown RBP9.87□□□□□ -0.83
CHD7-203ENST00000525508 THOC2Q8NI27 1593 aaKnown RBP9.87□□□□□ -0.83
CHD7-203ENST00000525508 MRE11P49959 708 aa9.87□□□□□ -0.83
CHD7-203ENST00000525508 SF3B2Q13435 895 aaKnown RBP9.87□□□□□ -0.83
CHD7-203ENST00000525508 SLC4A8Q2Y0W8 1093 aa9.87□□□□□ -0.83
CHD7-203ENST00000525508 MCM2P49736 904 aa9.87□□□□□ -0.83
CHD7-203ENST00000525508 LARP1Q6PKG0 1096 aaKnown RBP9.87□□□□□ -0.83
CHD7-203ENST00000525508 OLFM4Q6UX06 510 aa9.87□□□□□ -0.83
CHD7-203ENST00000525508 IGHMBP2P38935 993 aaKnown RBP9.86□□□□□ -0.83
CHD7-203ENST00000525508 LRRC59Q96AG4 307 aaKnown RBP9.86□□□□□ -0.83
CHD7-203ENST00000525508 AIDAQ96BJ3 306 aa9.86□□□□□ -0.83
CHD7-203ENST00000525508 CCDC69A6NI79 296 aa9.86□□□□□ -0.83
CHD7-203ENST00000525508 RAB11FIP4Q86YS3 637 aa9.86□□□□□ -0.83
CHD7-203ENST00000525508 SSBP05455 408 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHD7-203ENST00000525508 ZFYVE27Q5T4F4 411 aa9.86□□□□□ -0.83
CHD7-203ENST00000525508 TRIM22Q8IYM9 498 aa9.86□□□□□ -0.83
CHD7-203ENST00000525508 MAP3K2Q9Y2U5 619 aa9.86□□□□□ -0.83
CHD7-203ENST00000525508 GPATCH8Q9UKJ3 1502 aaKnown RBP9.85□□□□□ -0.83
CHD7-203ENST00000525508 RPRD2Q5VT52 1461 aaKnown RBP9.85□□□□□ -0.83
CHD7-203ENST00000525508 MBD3O95983 291 aa9.85□□□□□ -0.83
CHD7-203ENST00000525508 SLC3A2P08195 630 aaKnown RBP9.85□□□□□ -0.83
CHD7-203ENST00000525508 IFIT1P09914 478 aaKnown RBP9.85□□□□□ -0.83
CHD7-203ENST00000525508 ANKRD24Q8TF21 1146 aa9.85□□□□□ -0.83
CHD7-203ENST00000525508 UBAC1Q9BSL1 405 aa9.85□□□□□ -0.83
CHD7-203ENST00000525508 GDPD2Q9HCC8 539 aa9.85□□□□□ -0.83
CHD7-203ENST00000525508 DBF4Q9UBU7 674 aaPredicted RBP9.85□□□□□ -0.83
CHD7-203ENST00000525508 USP5P45974 858 aa9.85□□□□□ -0.83
CHD7-203ENST00000525508 KRT85P78386 507 aa9.85□□□□□ -0.83
CHD7-203ENST00000525508 FAM177A1Q8N128 213 aaPredicted RBP9.85□□□□□ -0.83
CHD7-203ENST00000525508 MEIS3Q99687 375 aa9.85□□□□□ -0.83
CHD7-203ENST00000525508 DHX29Q7Z478 1369 aaKnown RBP9.85□□□□□ -0.83
CHD7-203ENST00000525508 EXOC5O00471 708 aa9.84□□□□□ -0.83
CHD7-203ENST00000525508 GLRX3O76003 335 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms