RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 IFT57Q9NWB7 429 aa22.45■■□□□ 1.18
PCDHB18P-201ENST00000524813 USP26Q9BXU7 913 aa22.45■■□□□ 1.18
PCDHB18P-201ENST00000524813 TTC22Q5TAA0 569 aa22.44■■□□□ 1.18
PCDHB18P-201ENST00000524813 POLKQ9UBT6 870 aa22.44■■□□□ 1.18
PCDHB18P-201ENST00000524813 PKP1Q13835 747 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 TWISTNBQ3B726 338 aaPredicted RBP22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 SLIT1O75093 1534 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 API5Q9BZZ5 524 aaKnown RBP22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 PDCL3Q9H2J4 239 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 CABP1Q9NZU7 370 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 C16orf71Q8IYS4 520 aaPredicted RBP22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 WAPLQ7Z5K2 1190 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 RBSNQ9H1K0 784 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 DCTPP1Q9H773 170 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 ARHGAP23Q9P227 1491 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 ADAMTS13Q76LX8 1427 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 PLEKHG1Q9ULL1 1385 aa22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 C8orf58Q8NAV2 365 aa22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 CDK19Q9BWU1 502 aa22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 DLC1Q96QB1 1528 aa22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 HS1BP3Q53T59 392 aa22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 INTS3Q68E01 1043 aaKnown RBP22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 THEMISQ8N1K5 641 aaPredicted RBP22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 KNDC1Q76NI1 1749 aa22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 SLC26A8Q96RN1 970 aa22.39■■□□□ 1.18
PCDHB18P-201ENST00000524813 CWC22Q9HCG8 908 aaKnown RBP22.39■■□□□ 1.18
PCDHB18P-201ENST00000524813 PRPF40AO75400 957 aaKnown RBP22.38■■□□□ 1.17
PCDHB18P-201ENST00000524813 PRIM1P49642 420 aaKnown RBP22.38■■□□□ 1.17
PCDHB18P-201ENST00000524813 ZGPATQ8N5A5 531 aaKnown RBP22.38■■□□□ 1.17
PCDHB18P-201ENST00000524813 OTUD7AQ8TE49 926 aaPredicted RBP22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 PDLIM2Q96JY6 352 aa22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 RBM27Q9P2N5 1060 aaKnown RBP22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 NOL7Q9UMY1 257 aaKnown RBP22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 ZNF142P52746 1687 aaPredicted RBP22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 GPT2Q8TD30 523 aa22.36■■□□□ 1.17
PCDHB18P-201ENST00000524813 KIF24Q5T7B8 1368 aa22.36■■□□□ 1.17
PCDHB18P-201ENST00000524813 ST18O60284 1047 aa22.36■■□□□ 1.17
PCDHB18P-201ENST00000524813 TERF1P54274 439 aa22.36■■□□□ 1.17
PCDHB18P-201ENST00000524813 SDSP20132 328 aa22.35■■□□□ 1.17
PCDHB18P-201ENST00000524813 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.35■■□□□ 1.17
PCDHB18P-201ENST00000524813 ZDHHC9Q9Y397 364 aa22.35■■□□□ 1.17
PCDHB18P-201ENST00000524813 R3HCC1Q9Y3T6 440 aaKnown RBP22.35■■□□□ 1.17
PCDHB18P-201ENST00000524813 CPS1P31327 1500 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 IL13P35225 146 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 CASC1Q6TDU7 716 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 ANKRD44Q8N8A2 993 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 EMILIN1Q9Y6C2 1016 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 ZNF500O60304 480 aaPredicted RBP22.33■■□□□ 1.17
PCDHB18P-201ENST00000524813 RBM10P98175 930 aaKnown RBP22.33■■□□□ 1.16
PCDHB18P-201ENST00000524813 FAM83GA6ND36 823 aa22.32■■□□□ 1.16
PCDHB18P-201ENST00000524813 LMOD3Q0VAK6 560 aa22.32■■□□□ 1.16
PCDHB18P-201ENST00000524813 SETD1BQ9UPS6 1966 aaKnown RBP22.32■■□□□ 1.16
PCDHB18P-201ENST00000524813 SMARCA5O60264 1052 aaPredicted RBP22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 CHAMP1Q96JM3 812 aa22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 TECPR2O15040 1411 aa22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 ATP10DQ9P241 1426 aa22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 APBB1O00213 710 aa22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 TMEM63CQ9P1W3 806 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 MAP2P11137 1827 aaKnown RBP22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 ROBO2Q9HCK4 1378 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 DCTN1Q14203 1278 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 CEP85Q6P2H3 762 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 LRSAM1Q6UWE0 723 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 RPAP2Q8IXW5 612 aaPredicted RBP22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 REC8O95072 547 aa22.29■■□□□ 1.16
PCDHB18P-201ENST00000524813 PTPRUQ92729 1446 aa22.29■■□□□ 1.16
PCDHB18P-201ENST00000524813 SYCE3A1L190 88 aa22.28■■□□□ 1.16
PCDHB18P-201ENST00000524813 ZKSCAN5Q9Y2L8 839 aa22.28■■□□□ 1.16
PCDHB18P-201ENST00000524813 NSFL1CQ9UNZ2 370 aaKnown RBP22.28■■□□□ 1.16
PCDHB18P-201ENST00000524813 FOXD4L5Q5VV16 416 aaPredicted RBP22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 FOXD4L4Q8WXT5 416 aaPredicted RBP22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 ERC2O15083 957 aa22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 FAM13BQ9NYF5 915 aa22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 DIP2AQ14689 1571 aa22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 DLG5Q8TDM6 1919 aa22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 RGS12O14924 1447 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 ATP7BP35670 1465 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 UQCRHLA0A096LP55 91 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 UQCRHP07919 91 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 CDK12Q9NYV4 1490 aaPredicted RBP22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 RTL1A6NKG5 1358 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 MCM5P33992 734 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 NME9Q86XW9 330 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 CCDC39Q9UFE4 941 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 MSH6P52701 1360 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 KRT24Q2M2I5 525 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 ZRANB1Q9UGI0 708 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 CSPP1Q1MSJ5 1256 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 TBX22Q9Y458 520 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 CPSF1Q10570 1443 aaKnown RBP22.22■■□□□ 1.15
PCDHB18P-201ENST00000524813 MEIS3Q99687 375 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms