RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 CEP170BQ9Y4F5 1589 aaPredicted RBP11.13□□□□□ -0.63
PKP3-202ENST00000524646 INTS3Q68E01 1043 aaKnown RBP11.13□□□□□ -0.63
PKP3-202ENST00000524646 SIRT2Q8IXJ6 389 aa11.13□□□□□ -0.63
PKP3-202ENST00000524646 RTL1A6NKG5 1358 aa11.13□□□□□ -0.63
PKP3-202ENST00000524646 KDM3BQ7LBC6 1761 aa11.13□□□□□ -0.63
PKP3-202ENST00000524646 PTPRCP08575 1304 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 TTC21AQ8NDW8 1320 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 NWD1Q149M9 1564 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 FAM83GA6ND36 823 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
PKP3-202ENST00000524646 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 AEBP1Q8IUX7 1158 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 SBNO1A3KN83 1393 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 FLT4P35916 1363 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 KDRP35968 1356 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 PXDNLA1KZ92 1463 aa11.12□□□□□ -0.63
PKP3-202ENST00000524646 ACEP12821 1306 aa11.11□□□□□ -0.63
PKP3-202ENST00000524646 ANKARQ7Z5J8 1434 aa11.11□□□□□ -0.63
PKP3-202ENST00000524646 PHRF1Q9P1Y6 1649 aaKnown RBP11.11□□□□□ -0.63
PKP3-202ENST00000524646 FSD2A1L4K1 749 aa11.11□□□□□ -0.63
PKP3-202ENST00000524646 ELL2O00472 640 aaPredicted RBP11.11□□□□□ -0.63
PKP3-202ENST00000524646 SPRYD3Q8NCJ5 442 aa11.11□□□□□ -0.63
PKP3-202ENST00000524646 PTMSP20962 102 aa11.1□□□□□ -0.63
PKP3-202ENST00000524646 DCTN1Q14203 1278 aa11.1□□□□□ -0.63
PKP3-202ENST00000524646 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
PKP3-202ENST00000524646 ANKRD44Q8N8A2 993 aa11.1□□□□□ -0.63
PKP3-202ENST00000524646 KIF2CQ99661 725 aa11.1□□□□□ -0.63
PKP3-202ENST00000524646 MED1Q15648 1581 aaPredicted RBP11.1□□□□□ -0.63
PKP3-202ENST00000524646 LMO7Q8WWI1 1683 aa11.1□□□□□ -0.63
PKP3-202ENST00000524646 ZNF142P52746 1687 aaPredicted RBP11.09□□□□□ -0.63
PKP3-202ENST00000524646 K7ELQ4 463 aaPredicted RBP11.09□□□□□ -0.63
PKP3-202ENST00000524646 CHL1O00533 1208 aa11.09□□□□□ -0.63
PKP3-202ENST00000524646 GSPT1P15170 499 aaKnown RBP11.09□□□□□ -0.63
PKP3-202ENST00000524646 TTC22Q5TAA0 569 aa11.09□□□□□ -0.63
PKP3-202ENST00000524646 GBP4Q96PP9 640 aa11.09□□□□□ -0.63
PKP3-202ENST00000524646 DCTPP1Q9H773 170 aa11.09□□□□□ -0.63
PKP3-202ENST00000524646 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
PKP3-202ENST00000524646 GOLGA6L3A6NEY3 463 aa11.08□□□□□ -0.64
PKP3-202ENST00000524646 TRAK2O60296 914 aa11.08□□□□□ -0.64
PKP3-202ENST00000524646 RAB3GAP1Q15042 981 aa11.08□□□□□ -0.64
PKP3-202ENST00000524646 PLEKHM2Q8IWE5 1019 aa11.08□□□□□ -0.64
PKP3-202ENST00000524646 CRYBG1Q9Y4K1 1723 aa11.08□□□□□ -0.64
PKP3-202ENST00000524646 CHD2O14647 1828 aaKnown RBP11.07□□□□□ -0.64
PKP3-202ENST00000524646 CEP85Q6P2H3 762 aa11.07□□□□□ -0.64
PKP3-202ENST00000524646 RPAP2Q8IXW5 612 aaPredicted RBP11.07□□□□□ -0.64
PKP3-202ENST00000524646 MAP3K19Q56UN5 1328 aa11.07□□□□□ -0.64
PKP3-202ENST00000524646 IGSF1Q8N6C5 1336 aa11.07□□□□□ -0.64
PKP3-202ENST00000524646 RABEP1Q15276 862 aa11.06□□□□□ -0.64
PKP3-202ENST00000524646 RGPD2P0DJD1 1756 aa11.05□□□□□ -0.64
PKP3-202ENST00000524646 CAMTA1Q9Y6Y1 1673 aa11.05□□□□□ -0.64
PKP3-202ENST00000524646 KRT24Q2M2I5 525 aa11.05□□□□□ -0.64
PKP3-202ENST00000524646 MCM10Q7L590 875 aa11.05□□□□□ -0.64
PKP3-202ENST00000524646 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
PKP3-202ENST00000524646 NFAT5O94916 1531 aa11.04□□□□□ -0.64
PKP3-202ENST00000524646 HMMRO75330 724 aa11.04□□□□□ -0.64
PKP3-202ENST00000524646 CD2BP2O95400 341 aaKnown RBP11.04□□□□□ -0.64
PKP3-202ENST00000524646 HSP90AB2PQ58FF8 381 aa11.04□□□□□ -0.64
PKP3-202ENST00000524646 GAS2L2Q8NHY3 880 aa11.04□□□□□ -0.64
PKP3-202ENST00000524646 MEIS3Q99687 375 aa11.04□□□□□ -0.64
PKP3-202ENST00000524646 SOS1Q07889 1333 aaPredicted RBP11.04□□□□□ -0.64
PKP3-202ENST00000524646 SIPA1L3O60292 1781 aaPredicted RBP11.03□□□□□ -0.64
PKP3-202ENST00000524646 HSP90AA1P07900 732 aaKnown RBP11.03□□□□□ -0.64
PKP3-202ENST00000524646 LTKP29376 864 aa11.03□□□□□ -0.64
PKP3-202ENST00000524646 MRE11P49959 708 aa11.03□□□□□ -0.64
PKP3-202ENST00000524646 CCT4P50991 539 aaKnown RBP11.03□□□□□ -0.64
PKP3-202ENST00000524646 SKOR2Q2VWA4 1001 aaPredicted RBP11.03□□□□□ -0.64
PKP3-202ENST00000524646 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
PKP3-202ENST00000524646 MAP3K5Q99683 1374 aa11.03□□□□□ -0.64
PKP3-202ENST00000524646 XRCC6P12956 609 aaKnown RBP eCLIP11.02□□□□□ -0.65
PKP3-202ENST00000524646 CLEC17AQ6ZS10 378 aa11.02□□□□□ -0.65
PKP3-202ENST00000524646 RTF1Q92541 710 aaKnown RBP11.02□□□□□ -0.65
PKP3-202ENST00000524646 GZF1Q9H116 711 aaPredicted RBP11.02□□□□□ -0.65
PKP3-202ENST00000524646 TSPYL4Q9UJ04 414 aa11.02□□□□□ -0.65
PKP3-202ENST00000524646 EID1Q9Y6B2 187 aa11.02□□□□□ -0.65
PKP3-202ENST00000524646 IBTKQ9P2D0 1353 aaPredicted RBP11.02□□□□□ -0.65
PKP3-202ENST00000524646 HTATSF1O43719 755 aaKnown RBP11.01□□□□□ -0.65
PKP3-202ENST00000524646 MTHFSDQ2M296 383 aaKnown RBP11.01□□□□□ -0.65
PKP3-202ENST00000524646 OTUD7AQ8TE49 926 aaPredicted RBP11.01□□□□□ -0.65
PKP3-202ENST00000524646 TBX22Q9Y458 520 aa11.01□□□□□ -0.65
PKP3-202ENST00000524646 GOLGA6L22H0YM25 854 aa11□□□□□ -0.65
PKP3-202ENST00000524646 REC8O95072 547 aa11□□□□□ -0.65
PKP3-202ENST00000524646 SDSP20132 328 aa11□□□□□ -0.65
PKP3-202ENST00000524646 SSFA2P28290 1259 aa11□□□□□ -0.65
PKP3-202ENST00000524646 RBM42Q9BTD8 480 aaKnown RBP11□□□□□ -0.65
PKP3-202ENST00000524646 USP26Q9BXU7 913 aa11□□□□□ -0.65
PKP3-202ENST00000524646 OSBPL3Q9H4L5 887 aa11□□□□□ -0.65
PKP3-202ENST00000524646 GRPEL1Q9HAV7 217 aa11□□□□□ -0.65
PKP3-202ENST00000524646 NUTM2FA1L443 756 aa10.99□□□□□ -0.65
PKP3-202ENST00000524646 SMARCA5O60264 1052 aaPredicted RBP10.99□□□□□ -0.65
PKP3-202ENST00000524646 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
PKP3-202ENST00000524646 ARXQ96QS3 562 aa10.99□□□□□ -0.65
PKP3-202ENST00000524646 STK31Q9BXU1 1019 aa10.99□□□□□ -0.65
PKP3-202ENST00000524646 PANK2Q9BZ23 570 aa10.99□□□□□ -0.65
PKP3-202ENST00000524646 AMOTL2Q9Y2J4 779 aa10.99□□□□□ -0.65
PKP3-202ENST00000524646 ADAMTS7Q9UKP4 1686 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 ERC2O15083 957 aa10.98□□□□□ -0.65
PKP3-202ENST00000524646 SOX12O15370 315 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms