RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 ANKLE2Q86XL3 938 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 PHACTR3Q96KR7 559 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 STRCP1A6NGW2 1772 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 PTPRCP08575 1304 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 CHL1O00533 1208 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 INTS3Q68E01 1043 aaKnown RBP6.88□□□□□ -1.31
CLINT1-208ENST00000524306 ITPRIPQ8IWB1 547 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
CLINT1-208ENST00000524306 BCL2L13Q9BXK5 485 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 ANTXR1Q9H6X2 564 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 MBIPQ9NS73 344 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 EMILIN1Q9Y6C2 1016 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 CRB1P82279 1406 aa6.88□□□□□ -1.31
CLINT1-208ENST00000524306 N4BP2Q86UW6 1770 aaPredicted RBP6.88□□□□□ -1.31
CLINT1-208ENST00000524306 SNX21Q969T3 373 aa6.87□□□□□ -1.31
CLINT1-208ENST00000524306 NFAT5O94916 1531 aa6.87□□□□□ -1.31
CLINT1-208ENST00000524306 TRHP20396 242 aaPredicted RBP6.87□□□□□ -1.31
CLINT1-208ENST00000524306 MLECQ14165 292 aa6.87□□□□□ -1.31
CLINT1-208ENST00000524306 FLT4P35916 1363 aa6.87□□□□□ -1.31
CLINT1-208ENST00000524306 ACEP12821 1306 aa6.87□□□□□ -1.31
CLINT1-208ENST00000524306 EIF4A2Q14240 407 aaKnown RBP6.87□□□□□ -1.31
CLINT1-208ENST00000524306 TWISTNBQ3B726 338 aaPredicted RBP6.87□□□□□ -1.31
CLINT1-208ENST00000524306 CHD1LQ86WJ1 897 aa6.87□□□□□ -1.31
CLINT1-208ENST00000524306 ADAMTS7Q9UKP4 1686 aa6.86□□□□□ -1.31
CLINT1-208ENST00000524306 RGS12O14924 1447 aa6.86□□□□□ -1.31
CLINT1-208ENST00000524306 SEC24BO95487 1268 aa6.86□□□□□ -1.31
CLINT1-208ENST00000524306 IL27Q8NEV9 243 aa6.86□□□□□ -1.31
CLINT1-208ENST00000524306 LTN1O94822 1766 aa6.85□□□□□ -1.31
CLINT1-208ENST00000524306 IGSF1Q8N6C5 1336 aa6.85□□□□□ -1.31
CLINT1-208ENST00000524306 KCNA6P17658 529 aa6.85□□□□□ -1.31
CLINT1-208ENST00000524306 GSE1Q14687 1217 aa6.85□□□□□ -1.31
CLINT1-208ENST00000524306 PXDNLA1KZ92 1463 aa6.85□□□□□ -1.31
CLINT1-208ENST00000524306 RPAP2Q8IXW5 612 aaPredicted RBP6.85□□□□□ -1.31
CLINT1-208ENST00000524306 LAS1LQ9Y4W2 734 aaKnown RBP6.85□□□□□ -1.31
CLINT1-208ENST00000524306 C22orf23Q9BZE7 217 aa6.84□□□□□ -1.31
CLINT1-208ENST00000524306 AMOTL2Q9Y2J4 779 aa6.84□□□□□ -1.31
CLINT1-208ENST00000524306 HMOX1P09601 288 aa6.84□□□□□ -1.31
CLINT1-208ENST00000524306 DCTPP1Q9H773 170 aa6.84□□□□□ -1.31
CLINT1-208ENST00000524306 CIZ1Q9ULV3 898 aaPredicted RBP6.84□□□□□ -1.31
CLINT1-208ENST00000524306 OVOS2A0A0G2JMS6 1433 aa6.84□□□□□ -1.31
CLINT1-208ENST00000524306 ATP10DQ9P241 1426 aa6.84□□□□□ -1.31
CLINT1-208ENST00000524306 NHSL1Q5SYE7 1610 aa6.84□□□□□ -1.31
CLINT1-208ENST00000524306 DDIT3P35638 169 aa6.83□□□□□ -1.32
CLINT1-208ENST00000524306 TSPYL6Q8N831 410 aa6.83□□□□□ -1.32
CLINT1-208ENST00000524306 C8orf58Q8NAV2 365 aa6.83□□□□□ -1.32
CLINT1-208ENST00000524306 GAS2L2Q8NHY3 880 aa6.83□□□□□ -1.32
CLINT1-208ENST00000524306 TBC1D2Q9BYX2 928 aa6.83□□□□□ -1.32
CLINT1-208ENST00000524306 CACNA1FO60840 1977 aa6.83□□□□□ -1.32
CLINT1-208ENST00000524306 ANKRD44Q8N8A2 993 aa6.83□□□□□ -1.32
CLINT1-208ENST00000524306 ZRANB1Q9UGI0 708 aa6.83□□□□□ -1.32
CLINT1-208ENST00000524306 PARP4Q9UKK3 1724 aaKnown RBP6.83□□□□□ -1.32
CLINT1-208ENST00000524306 IBTKQ9P2D0 1353 aaPredicted RBP6.82□□□□□ -1.32
CLINT1-208ENST00000524306 RRS1Q15050 365 aaKnown RBP6.82□□□□□ -1.32
CLINT1-208ENST00000524306 SIRT2Q8IXJ6 389 aa6.82□□□□□ -1.32
CLINT1-208ENST00000524306 CHMP4AQ9BY43 222 aa6.82□□□□□ -1.32
CLINT1-208ENST00000524306 ABCA3Q99758 1704 aa6.82□□□□□ -1.32
CLINT1-208ENST00000524306 PTMSP20962 102 aa6.82□□□□□ -1.32
CLINT1-208ENST00000524306 CEBPAP49715 358 aaPredicted RBP6.82□□□□□ -1.32
CLINT1-208ENST00000524306 SULT6B1Q6IMI4 303 aa6.82□□□□□ -1.32
CLINT1-208ENST00000524306 CHMP5Q9NZZ3 219 aa6.82□□□□□ -1.32
CLINT1-208ENST00000524306 MAP3K19Q56UN5 1328 aa6.82□□□□□ -1.32
CLINT1-208ENST00000524306 COL18A1P39060 1754 aa6.81□□□□□ -1.32
CLINT1-208ENST00000524306 COL22A1Q8NFW1 1626 aaPredicted RBP6.81□□□□□ -1.32
CLINT1-208ENST00000524306 CCT4P50991 539 aaKnown RBP6.81□□□□□ -1.32
CLINT1-208ENST00000524306 OSBPL3Q9H4L5 887 aa6.81□□□□□ -1.32
CLINT1-208ENST00000524306 ISY1Q9ULR0 285 aaKnown RBP6.81□□□□□ -1.32
CLINT1-208ENST00000524306 NCKAP5LQ9HCH0 1330 aa6.81□□□□□ -1.32
CLINT1-208ENST00000524306 EPB41L2O43491 1005 aaKnown RBP6.8□□□□□ -1.32
CLINT1-208ENST00000524306 FBLN1P23142 703 aa6.8□□□□□ -1.32
CLINT1-208ENST00000524306 SLC4A3P48751 1232 aa6.8□□□□□ -1.32
CLINT1-208ENST00000524306 CLEC17AQ6ZS10 378 aa6.8□□□□□ -1.32
CLINT1-208ENST00000524306 C1orf167Q5SNV9 1468 aa6.8□□□□□ -1.32
CLINT1-208ENST00000524306 CDC45O75419 566 aa6.8□□□□□ -1.32
CLINT1-208ENST00000524306 IL17RAQ96F46 866 aa6.8□□□□□ -1.32
CLINT1-208ENST00000524306 THUMPD2Q9BTF0 503 aaKnown RBP6.8□□□□□ -1.32
CLINT1-208ENST00000524306 SIPA1L3O60292 1781 aaPredicted RBP6.8□□□□□ -1.32
CLINT1-208ENST00000524306 HOXB7P09629 217 aa6.8□□□□□ -1.32
CLINT1-208ENST00000524306 HSP90AB2PQ58FF8 381 aa6.8□□□□□ -1.32
CLINT1-208ENST00000524306 PKD1L3Q7Z443 1732 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 MSH6P52701 1360 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 FRAT2O75474 233 aaPredicted RBP6.79□□□□□ -1.32
CLINT1-208ENST00000524306 CEP85Q6P2H3 762 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 AEBP1Q8IUX7 1158 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 HSCBQ8IWL3 235 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 CEMIPQ8WUJ3 1361 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 PXDNQ92626 1479 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 HMMRO75330 724 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 ANKRD45Q5TZF3 282 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 PLEKHM2Q8IWE5 1019 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 KIF2CQ99661 725 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 LNPKQ9C0E8 428 aa6.79□□□□□ -1.32
CLINT1-208ENST00000524306 TUBGCP6Q96RT7 1819 aa6.78□□□□□ -1.32
CLINT1-208ENST00000524306 FAM83GA6ND36 823 aa6.78□□□□□ -1.32
CLINT1-208ENST00000524306 MTHFSDQ2M296 383 aaKnown RBP6.78□□□□□ -1.32
CLINT1-208ENST00000524306 TTC22Q5TAA0 569 aa6.78□□□□□ -1.32
CLINT1-208ENST00000524306 AOX1Q06278 1338 aa6.78□□□□□ -1.32
CLINT1-208ENST00000524306 MAP3K5Q99683 1374 aa6.78□□□□□ -1.32
CLINT1-208ENST00000524306 KDM3BQ7LBC6 1761 aa6.78□□□□□ -1.32
CLINT1-208ENST00000524306 PLCH1Q4KWH8 1693 aa6.78□□□□□ -1.32
CLINT1-208ENST00000524306 HOXC9P31274 260 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms