RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 CEP170BQ9Y4F5 1589 aaPredicted RBP13.52□□□□□ -0.25
RAB11FIP1-204ENST00000522774 AMPHP49418 695 aa13.51□□□□□ -0.25
RAB11FIP1-204ENST00000522774 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
RAB11FIP1-204ENST00000522774 EYA1Q99502 592 aa13.51□□□□□ -0.25
RAB11FIP1-204ENST00000522774 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
RAB11FIP1-204ENST00000522774 NLRP6P59044 892 aa13.51□□□□□ -0.25
RAB11FIP1-204ENST00000522774 KDRP35968 1356 aa13.5□□□□□ -0.25
RAB11FIP1-204ENST00000522774 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
RAB11FIP1-204ENST00000522774 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
RAB11FIP1-204ENST00000522774 ANTXR1Q9H6X2 564 aa13.5□□□□□ -0.25
RAB11FIP1-204ENST00000522774 MARF1Q9Y4F3 1742 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP1-204ENST00000522774 KIF24Q5T7B8 1368 aa13.49□□□□□ -0.25
RAB11FIP1-204ENST00000522774 ANKARQ7Z5J8 1434 aa13.49□□□□□ -0.25
RAB11FIP1-204ENST00000522774 BMP2KLQ5H9B9 411 aa13.48□□□□□ -0.25
RAB11FIP1-204ENST00000522774 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP1-204ENST00000522774 MSH6P52701 1360 aa13.47□□□□□ -0.25
RAB11FIP1-204ENST00000522774 HAP1P54257 671 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP1-204ENST00000522774 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
RAB11FIP1-204ENST00000522774 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
RAB11FIP1-204ENST00000522774 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
RAB11FIP1-204ENST00000522774 HOXC9P31274 260 aa13.47□□□□□ -0.25
RAB11FIP1-204ENST00000522774 GSE1Q14687 1217 aa13.47□□□□□ -0.25
RAB11FIP1-204ENST00000522774 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
RAB11FIP1-204ENST00000522774 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
RAB11FIP1-204ENST00000522774 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP1-204ENST00000522774 NWD1Q149M9 1564 aa13.46□□□□□ -0.26
RAB11FIP1-204ENST00000522774 G2E3Q7L622 706 aa13.45□□□□□ -0.26
RAB11FIP1-204ENST00000522774 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
RAB11FIP1-204ENST00000522774 PTPRCP08575 1304 aa13.45□□□□□ -0.26
RAB11FIP1-204ENST00000522774 GAS2L2Q8NHY3 880 aa13.45□□□□□ -0.26
RAB11FIP1-204ENST00000522774 MEIS3Q99687 375 aa13.45□□□□□ -0.26
RAB11FIP1-204ENST00000522774 DCTPP1Q9H773 170 aa13.45□□□□□ -0.26
RAB11FIP1-204ENST00000522774 ANKRD44Q8N8A2 993 aa13.44□□□□□ -0.26
RAB11FIP1-204ENST00000522774 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP1-204ENST00000522774 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
RAB11FIP1-204ENST00000522774 RBM25P49756 843 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP1-204ENST00000522774 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
RAB11FIP1-204ENST00000522774 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
RAB11FIP1-204ENST00000522774 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
RAB11FIP1-204ENST00000522774 F6X3S4 739 aa13.43□□□□□ -0.26
RAB11FIP1-204ENST00000522774 C14orf37Q86TY3 774 aa13.43□□□□□ -0.26
RAB11FIP1-204ENST00000522774 LRRC37A3O60309 1634 aa13.43□□□□□ -0.26
RAB11FIP1-204ENST00000522774 GSPT1P15170 499 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP1-204ENST00000522774 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
RAB11FIP1-204ENST00000522774 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
RAB11FIP1-204ENST00000522774 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
RAB11FIP1-204ENST00000522774 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
RAB11FIP1-204ENST00000522774 CHD2O14647 1828 aaKnown RBP13.42□□□□□ -0.26
RAB11FIP1-204ENST00000522774 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
RAB11FIP1-204ENST00000522774 SLC4A10Q6U841 1118 aa13.41□□□□□ -0.26
RAB11FIP1-204ENST00000522774 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
RAB11FIP1-204ENST00000522774 OTUD7AQ8TE49 926 aaPredicted RBP13.41□□□□□ -0.26
RAB11FIP1-204ENST00000522774 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
RAB11FIP1-204ENST00000522774 IL17REQ8NFR9 667 aa13.41□□□□□ -0.26
RAB11FIP1-204ENST00000522774 HTATSF1O43719 755 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP1-204ENST00000522774 SMARCA5O60264 1052 aaPredicted RBP13.4□□□□□ -0.26
RAB11FIP1-204ENST00000522774 KIF2CQ99661 725 aa13.4□□□□□ -0.26
RAB11FIP1-204ENST00000522774 APBB1O00213 710 aa13.4□□□□□ -0.26
RAB11FIP1-204ENST00000522774 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
RAB11FIP1-204ENST00000522774 NECTIN2Q92692 538 aa13.4□□□□□ -0.26
RAB11FIP1-204ENST00000522774 MAP3K5Q99683 1374 aa13.4□□□□□ -0.27
RAB11FIP1-204ENST00000522774 LTN1O94822 1766 aa13.39□□□□□ -0.27
RAB11FIP1-204ENST00000522774 CDC45O75419 566 aa13.38□□□□□ -0.27
RAB11FIP1-204ENST00000522774 FAM208AQ9UK61 1670 aaKnown RBP13.38□□□□□ -0.27
RAB11FIP1-204ENST00000522774 TTC22Q5TAA0 569 aa13.38□□□□□ -0.27
RAB11FIP1-204ENST00000522774 STK31Q9BXU1 1019 aa13.38□□□□□ -0.27
RAB11FIP1-204ENST00000522774 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
RAB11FIP1-204ENST00000522774 NFAT5O94916 1531 aa13.37□□□□□ -0.27
RAB11FIP1-204ENST00000522774 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
RAB11FIP1-204ENST00000522774 FLIIQ13045 1269 aa13.37□□□□□ -0.27
RAB11FIP1-204ENST00000522774 ESCO1Q5FWF5 840 aa13.37□□□□□ -0.27
RAB11FIP1-204ENST00000522774 SNX21Q969T3 373 aa13.37□□□□□ -0.27
RAB11FIP1-204ENST00000522774 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
RAB11FIP1-204ENST00000522774 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 IP6K1Q92551 441 aa13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 CHMP5Q9NZZ3 219 aa13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 ADGRL3Q9HAR2 1447 aa13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 ZBTB7CA1YPR0 619 aa13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 FKBP5Q13451 457 aaPredicted RBP13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 TAF7Q15545 349 aaPredicted RBP13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
RAB11FIP1-204ENST00000522774 PSME1Q06323 249 aa13.35□□□□□ -0.27
RAB11FIP1-204ENST00000522774 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
RAB11FIP1-204ENST00000522774 DDIT3P35638 169 aa13.34□□□□□ -0.27
RAB11FIP1-204ENST00000522774 SDSP20132 328 aa13.33□□□□□ -0.27
RAB11FIP1-204ENST00000522774 RGPD2P0DJD1 1756 aa13.33□□□□□ -0.27
RAB11FIP1-204ENST00000522774 HMMRO75330 724 aa13.33□□□□□ -0.28
RAB11FIP1-204ENST00000522774 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
RAB11FIP1-204ENST00000522774 GNAI2P04899 355 aa13.33□□□□□ -0.28
RAB11FIP1-204ENST00000522774 MCM4P33991 863 aa13.33□□□□□ -0.28
RAB11FIP1-204ENST00000522774 XPCQ01831 940 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP1-204ENST00000522774 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
RAB11FIP1-204ENST00000522774 HSP90AB1P08238 724 aaKnown RBP13.32□□□□□ -0.28
RAB11FIP1-204ENST00000522774 ORAI2Q96SN7 254 aa13.32□□□□□ -0.28
RAB11FIP1-204ENST00000522774 LGR6Q9HBX8 967 aa13.32□□□□□ -0.28
RAB11FIP1-204ENST00000522774 BRPF3Q9ULD4 1205 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms