RNA–Protein interactions for RNA: ENST00000522107.1

IGHV3-50-201, Transcript of immunoglobulin heavy variable 3-50 (pseudogene), humanhuman

BASIC

Gene IGHV3-50, Length 317 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-50-201ENST00000522107 IL13P35225 146 aa12.88□□□□□ -0.35
IGHV3-50-201ENST00000522107 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
IGHV3-50-201ENST00000522107 DDX54Q8TDD1 881 aaKnown RBP12.88□□□□□ -0.35
IGHV3-50-201ENST00000522107 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
IGHV3-50-201ENST00000522107 RREB1Q92766 1687 aa12.87□□□□□ -0.35
IGHV3-50-201ENST00000522107 COL3A1P02461 1466 aaPredicted RBP12.87□□□□□ -0.35
IGHV3-50-201ENST00000522107 CYP27B1O15528 508 aa12.87□□□□□ -0.35
IGHV3-50-201ENST00000522107 MTHFSP49914 203 aa12.87□□□□□ -0.35
IGHV3-50-201ENST00000522107 BCL11BQ9C0K0 894 aaPredicted RBP12.87□□□□□ -0.35
IGHV3-50-201ENST00000522107 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
IGHV3-50-201ENST00000522107 BAG6P46379 1132 aa12.86□□□□□ -0.35
IGHV3-50-201ENST00000522107 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
IGHV3-50-201ENST00000522107 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
IGHV3-50-201ENST00000522107 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
IGHV3-50-201ENST00000522107 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
IGHV3-50-201ENST00000522107 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
IGHV3-50-201ENST00000522107 DOT1LQ8TEK3 1739 aa12.83□□□□□ -0.36
IGHV3-50-201ENST00000522107 PLSCR1O15162 318 aa12.83□□□□□ -0.36
IGHV3-50-201ENST00000522107 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
IGHV3-50-201ENST00000522107 ANO8Q9HCE9 1232 aaPredicted RBP12.83□□□□□ -0.36
IGHV3-50-201ENST00000522107 BTAF1O14981 1849 aa12.83□□□□□ -0.36
IGHV3-50-201ENST00000522107 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
IGHV3-50-201ENST00000522107 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
IGHV3-50-201ENST00000522107 RAPGEF4Q8WZA2 1011 aa12.82□□□□□ -0.36
IGHV3-50-201ENST00000522107 KDRP35968 1356 aa12.81□□□□□ -0.36
IGHV3-50-201ENST00000522107 LRRC4BQ9NT99 713 aa12.81□□□□□ -0.36
IGHV3-50-201ENST00000522107 RGPD3A6NKT7 1758 aaPredicted RBP12.81□□□□□ -0.36
IGHV3-50-201ENST00000522107 RGPD4Q7Z3J3 1758 aa12.81□□□□□ -0.36
IGHV3-50-201ENST00000522107 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
IGHV3-50-201ENST00000522107 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
IGHV3-50-201ENST00000522107 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
IGHV3-50-201ENST00000522107 SULT6B1Q6IMI4 303 aa12.8□□□□□ -0.36
IGHV3-50-201ENST00000522107 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
IGHV3-50-201ENST00000522107 PHKG2P15735 406 aa12.79□□□□□ -0.36
IGHV3-50-201ENST00000522107 KCNQ4P56696 695 aa12.79□□□□□ -0.36
IGHV3-50-201ENST00000522107 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
IGHV3-50-201ENST00000522107 PDGFDQ9GZP0 370 aaPredicted RBP12.79□□□□□ -0.36
IGHV3-50-201ENST00000522107 KAT6BQ8WYB5 2073 aa12.79□□□□□ -0.36
IGHV3-50-201ENST00000522107 PAPPAQ13219 1627 aa12.78□□□□□ -0.36
IGHV3-50-201ENST00000522107 HMOX1P09601 288 aa12.78□□□□□ -0.36
IGHV3-50-201ENST00000522107 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
IGHV3-50-201ENST00000522107 PCDH11XQ9BZA7 1347 aa12.78□□□□□ -0.36
IGHV3-50-201ENST00000522107 PCDH11YQ9BZA8 1340 aa12.78□□□□□ -0.36
IGHV3-50-201ENST00000522107 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
IGHV3-50-201ENST00000522107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
IGHV3-50-201ENST00000522107 ITGB4P16144 1822 aa12.76□□□□□ -0.37
IGHV3-50-201ENST00000522107 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
IGHV3-50-201ENST00000522107 LY75O60449 1722 aa12.75□□□□□ -0.37
IGHV3-50-201ENST00000522107 ZNF827Q17R98 1081 aa12.75□□□□□ -0.37
IGHV3-50-201ENST00000522107 PIGBQ92521 554 aa12.75□□□□□ -0.37
IGHV3-50-201ENST00000522107 SYTL4Q96C24 671 aaPredicted RBP12.75□□□□□ -0.37
IGHV3-50-201ENST00000522107 SPG7Q9UQ90 795 aa12.74□□□□□ -0.37
IGHV3-50-201ENST00000522107 PLEKHG2Q9H7P9 1386 aa12.73□□□□□ -0.37
IGHV3-50-201ENST00000522107 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
IGHV3-50-201ENST00000522107 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
IGHV3-50-201ENST00000522107 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
IGHV3-50-201ENST00000522107 ZEB1P37275 1124 aaPredicted RBP12.72□□□□□ -0.37
IGHV3-50-201ENST00000522107 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
IGHV3-50-201ENST00000522107 AMIGO3Q86WK7 504 aa12.72□□□□□ -0.37
IGHV3-50-201ENST00000522107 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
IGHV3-50-201ENST00000522107 PHACTR3Q96KR7 559 aa12.72□□□□□ -0.37
IGHV3-50-201ENST00000522107 ASAP1Q9ULH1 1129 aa12.72□□□□□ -0.37
IGHV3-50-201ENST00000522107 CASZ1Q86V15 1759 aa12.71□□□□□ -0.37
IGHV3-50-201ENST00000522107 PLEKHO1Q53GL0 409 aaPredicted RBP12.71□□□□□ -0.37
IGHV3-50-201ENST00000522107 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
IGHV3-50-201ENST00000522107 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
IGHV3-50-201ENST00000522107 LGR6Q9HBX8 967 aa12.71□□□□□ -0.37
IGHV3-50-201ENST00000522107 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
IGHV3-50-201ENST00000522107 AMOTQ4VCS5 1084 aa12.7□□□□□ -0.38
IGHV3-50-201ENST00000522107 SMIM5Q71RC9 77 aa12.7□□□□□ -0.38
IGHV3-50-201ENST00000522107 ATG3Q9NT62 314 aa12.7□□□□□ -0.38
IGHV3-50-201ENST00000522107 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
IGHV3-50-201ENST00000522107 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
IGHV3-50-201ENST00000522107 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
IGHV3-50-201ENST00000522107 SLC15A2Q16348 729 aa12.69□□□□□ -0.38
IGHV3-50-201ENST00000522107 ITPK1Q13572 414 aa12.68□□□□□ -0.38
IGHV3-50-201ENST00000522107 LRP5O75197 1615 aa12.67□□□□□ -0.38
IGHV3-50-201ENST00000522107 SCN11AQ9UI33 1791 aa12.67□□□□□ -0.38
IGHV3-50-201ENST00000522107 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
IGHV3-50-201ENST00000522107 AKAP4Q5JQC9 854 aa12.67□□□□□ -0.38
IGHV3-50-201ENST00000522107 SLC27A3Q5K4L6 730 aa12.67□□□□□ -0.38
IGHV3-50-201ENST00000522107 DCAF5Q96JK2 942 aa12.67□□□□□ -0.38
IGHV3-50-201ENST00000522107 MRC1P22897 1456 aa12.66□□□□□ -0.38
IGHV3-50-201ENST00000522107 UTRNP46939 3433 aa12.66□□□□□ -0.38
IGHV3-50-201ENST00000522107 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
IGHV3-50-201ENST00000522107 RNMTO43148 476 aaKnown RBP12.66□□□□□ -0.38
IGHV3-50-201ENST00000522107 NBPF14Q5TI25 921 aa12.66□□□□□ -0.38
IGHV3-50-201ENST00000522107 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
IGHV3-50-201ENST00000522107 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
IGHV3-50-201ENST00000522107 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
IGHV3-50-201ENST00000522107 TAF1LQ8IZX4 1826 aa12.66□□□□□ -0.38
IGHV3-50-201ENST00000522107 PNPLA7Q6ZV29 1317 aa12.65□□□□□ -0.38
IGHV3-50-201ENST00000522107 U2AF1L5P0DN76 240 aaPredicted RBP12.65□□□□□ -0.38
IGHV3-50-201ENST00000522107 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.38
IGHV3-50-201ENST00000522107 CCDC184Q52MB2 194 aa12.65□□□□□ -0.38
IGHV3-50-201ENST00000522107 NFATC2IPQ8NCF5 419 aa12.65□□□□□ -0.38
IGHV3-50-201ENST00000522107 LINC00116Q8NCU8 138 aa12.65□□□□□ -0.38
IGHV3-50-201ENST00000522107 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
IGHV3-50-201ENST00000522107 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
IGHV3-50-201ENST00000522107 VIRMAQ69YN4 1812 aaKnown RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms