RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 ABCC4O15439 1325 aa16.76■□□□□ 0.27
NEFM-205ENST00000521540 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
NEFM-205ENST00000521540 ORAI2Q96SN7 254 aa16.76■□□□□ 0.27
NEFM-205ENST00000521540 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
NEFM-205ENST00000521540 RGPD1P0DJD0 1748 aa16.75■□□□□ 0.27
NEFM-205ENST00000521540 EIF4A2Q14240 407 aaKnown RBP16.74■□□□□ 0.27
NEFM-205ENST00000521540 ESCO1Q5FWF5 840 aa16.74■□□□□ 0.27
NEFM-205ENST00000521540 SSH2Q76I76 1423 aa16.74■□□□□ 0.27
NEFM-205ENST00000521540 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
NEFM-205ENST00000521540 THUMPD2Q9BTF0 503 aaKnown RBP16.73■□□□□ 0.27
NEFM-205ENST00000521540 NHSL1Q5SYE7 1610 aa16.73■□□□□ 0.27
NEFM-205ENST00000521540 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
NEFM-205ENST00000521540 KIAA0232Q92628 1395 aa16.72■□□□□ 0.27
NEFM-205ENST00000521540 CHD1LQ86WJ1 897 aa16.72■□□□□ 0.27
NEFM-205ENST00000521540 TSPYL6Q8N831 410 aa16.72■□□□□ 0.27
NEFM-205ENST00000521540 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
NEFM-205ENST00000521540 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
NEFM-205ENST00000521540 AHDC1Q5TGY3 1603 aaPredicted RBP16.71■□□□□ 0.27
NEFM-205ENST00000521540 SULT6B1Q6IMI4 303 aa16.71■□□□□ 0.27
NEFM-205ENST00000521540 C22orf23Q9BZE7 217 aa16.71■□□□□ 0.27
NEFM-205ENST00000521540 PEAK1Q9H792 1746 aa16.71■□□□□ 0.27
NEFM-205ENST00000521540 GSE1Q14687 1217 aa16.7■□□□□ 0.26
NEFM-205ENST00000521540 C8orf58Q8NAV2 365 aa16.7■□□□□ 0.26
NEFM-205ENST00000521540 FBXO41Q8TF61 875 aa16.7■□□□□ 0.26
NEFM-205ENST00000521540 CHL1O00533 1208 aa16.69■□□□□ 0.26
NEFM-205ENST00000521540 BMP2KLQ5H9B9 411 aa16.69■□□□□ 0.26
NEFM-205ENST00000521540 SBNO1A3KN83 1393 aa16.68■□□□□ 0.26
NEFM-205ENST00000521540 PXDNQ92626 1479 aa16.68■□□□□ 0.26
NEFM-205ENST00000521540 FOXO3O43524 673 aa16.67■□□□□ 0.26
NEFM-205ENST00000521540 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
NEFM-205ENST00000521540 NPHP3Q7Z494 1330 aa16.67■□□□□ 0.26
NEFM-205ENST00000521540 FAM83GA6ND36 823 aa16.67■□□□□ 0.26
NEFM-205ENST00000521540 INTS3Q68E01 1043 aaKnown RBP16.67■□□□□ 0.26
NEFM-205ENST00000521540 TBC1D2Q9BYX2 928 aa16.67■□□□□ 0.26
NEFM-205ENST00000521540 FLT4P35916 1363 aa16.67■□□□□ 0.26
NEFM-205ENST00000521540 ELL2O00472 640 aaPredicted RBP16.66■□□□□ 0.26
NEFM-205ENST00000521540 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
NEFM-205ENST00000521540 DDX17Q92841 729 aaKnown RBP16.66■□□□□ 0.26
NEFM-205ENST00000521540 LNPKQ9C0E8 428 aa16.66■□□□□ 0.26
NEFM-205ENST00000521540 PTPRCP08575 1304 aa16.66■□□□□ 0.26
NEFM-205ENST00000521540 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
NEFM-205ENST00000521540 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
NEFM-205ENST00000521540 AEBP1Q8IUX7 1158 aa16.65■□□□□ 0.26
NEFM-205ENST00000521540 COL16A1Q07092 1604 aaPredicted RBP16.65■□□□□ 0.26
NEFM-205ENST00000521540 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
NEFM-205ENST00000521540 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
NEFM-205ENST00000521540 FRAT2O75474 233 aaPredicted RBP16.65■□□□□ 0.26
NEFM-205ENST00000521540 ANTXR1Q9H6X2 564 aa16.65■□□□□ 0.26
NEFM-205ENST00000521540 SOS2Q07890 1332 aaPredicted RBP16.64■□□□□ 0.25
NEFM-205ENST00000521540 RBM25P49756 843 aaKnown RBP16.64■□□□□ 0.25
NEFM-205ENST00000521540 DCTN1Q14203 1278 aa16.64■□□□□ 0.25
NEFM-205ENST00000521540 HSP90AB2PQ58FF8 381 aa16.64■□□□□ 0.25
NEFM-205ENST00000521540 CRB1P82279 1406 aa16.63■□□□□ 0.25
NEFM-205ENST00000521540 KDRP35968 1356 aa16.63■□□□□ 0.25
NEFM-205ENST00000521540 HTATSF1O43719 755 aaKnown RBP16.63■□□□□ 0.25
NEFM-205ENST00000521540 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
NEFM-205ENST00000521540 XPCQ01831 940 aaPredicted RBP16.62■□□□□ 0.25
NEFM-205ENST00000521540 PSME1Q06323 249 aa16.62■□□□□ 0.25
NEFM-205ENST00000521540 RPAP2Q8IXW5 612 aaPredicted RBP16.62■□□□□ 0.25
NEFM-205ENST00000521540 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
NEFM-205ENST00000521540 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
NEFM-205ENST00000521540 ILDR1Q86SU0 546 aaPredicted RBP16.61■□□□□ 0.25
NEFM-205ENST00000521540 SIRT2Q8IXJ6 389 aa16.61■□□□□ 0.25
NEFM-205ENST00000521540 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
NEFM-205ENST00000521540 PIK3C2AO00443 1686 aa16.61■□□□□ 0.25
NEFM-205ENST00000521540 HSPA1LP34931 641 aa16.61■□□□□ 0.25
NEFM-205ENST00000521540 HSCBQ8IWL3 235 aa16.61■□□□□ 0.25
NEFM-205ENST00000521540 SNX21Q969T3 373 aa16.61■□□□□ 0.25
NEFM-205ENST00000521540 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
NEFM-205ENST00000521540 ALS2Q96Q42 1657 aa16.61■□□□□ 0.25
NEFM-205ENST00000521540 IGSF1Q8N6C5 1336 aa16.6■□□□□ 0.25
NEFM-205ENST00000521540 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
NEFM-205ENST00000521540 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
NEFM-205ENST00000521540 ANKRD44Q8N8A2 993 aa16.59■□□□□ 0.25
NEFM-205ENST00000521540 RGS12O14924 1447 aa16.59■□□□□ 0.25
NEFM-205ENST00000521540 TNS3Q68CZ2 1445 aa16.59■□□□□ 0.25
NEFM-205ENST00000521540 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
NEFM-205ENST00000521540 AMPHP49418 695 aa16.59■□□□□ 0.25
NEFM-205ENST00000521540 MCM10Q7L590 875 aa16.59■□□□□ 0.25
NEFM-205ENST00000521540 CHMP5Q9NZZ3 219 aa16.59■□□□□ 0.25
NEFM-205ENST00000521540 SOX12O15370 315 aa16.57■□□□□ 0.24
NEFM-205ENST00000521540 SPATA31A3Q5VYP0 1347 aa16.57■□□□□ 0.24
NEFM-205ENST00000521540 LRRC37A3O60309 1634 aa16.57■□□□□ 0.24
NEFM-205ENST00000521540 MARF1Q9Y4F3 1742 aaKnown RBP16.57■□□□□ 0.24
NEFM-205ENST00000521540 MTHFSDQ2M296 383 aaKnown RBP16.56■□□□□ 0.24
NEFM-205ENST00000521540 BABAM1Q9NWV8 329 aa16.56■□□□□ 0.24
NEFM-205ENST00000521540 CACNA1FO60840 1977 aa16.56■□□□□ 0.24
NEFM-205ENST00000521540 RTL1A6NKG5 1358 aa16.56■□□□□ 0.24
NEFM-205ENST00000521540 CDC45O75419 566 aa16.56■□□□□ 0.24
NEFM-205ENST00000521540 LRRC59Q96AG4 307 aaKnown RBP16.56■□□□□ 0.24
NEFM-205ENST00000521540 ATP10DQ9P241 1426 aa16.56■□□□□ 0.24
NEFM-205ENST00000521540 EYA1Q99502 592 aa16.55■□□□□ 0.24
NEFM-205ENST00000521540 TSPYL4Q9UJ04 414 aa16.55■□□□□ 0.24
NEFM-205ENST00000521540 COL22A1Q8NFW1 1626 aaPredicted RBP16.55■□□□□ 0.24
NEFM-205ENST00000521540 CCT4P50991 539 aaKnown RBP16.54■□□□□ 0.24
NEFM-205ENST00000521540 HMMRO75330 724 aa16.54■□□□□ 0.24
NEFM-205ENST00000521540 NLRP6P59044 892 aa16.54■□□□□ 0.24
NEFM-205ENST00000521540 MED1Q15648 1581 aaPredicted RBP16.54■□□□□ 0.24
NEFM-205ENST00000521540 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
NEFM-205ENST00000521540 TBC1D9Q6ZT07 1266 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms