RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 COG3Q96JB2 828 aa12.68□□□□□ -0.38
VNN3-212ENST00000519686 USP47Q96K76 1375 aa12.67□□□□□ -0.38
VNN3-212ENST00000519686 BCL9O00512 1426 aa12.67□□□□□ -0.38
VNN3-212ENST00000519686 IL2RBP14784 551 aa12.67□□□□□ -0.38
VNN3-212ENST00000519686 VASPP50552 380 aaPredicted RBP12.66□□□□□ -0.38
VNN3-212ENST00000519686 ANKRD36BQ8N2N9 1353 aa12.66□□□□□ -0.38
VNN3-212ENST00000519686 AMPHP49418 695 aa12.65□□□□□ -0.38
VNN3-212ENST00000519686 CDCA8Q53HL2 280 aa12.65□□□□□ -0.38
VNN3-212ENST00000519686 PTF1AQ7RTS3 328 aa12.65□□□□□ -0.38
VNN3-212ENST00000519686 MIER1Q8N108 512 aa12.65□□□□□ -0.38
VNN3-212ENST00000519686 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
VNN3-212ENST00000519686 FAM208AQ9UK61 1670 aaKnown RBP12.64□□□□□ -0.39
VNN3-212ENST00000519686 IP6K1Q92551 441 aa12.64□□□□□ -0.39
VNN3-212ENST00000519686 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
VNN3-212ENST00000519686 PPP1R1BQ9UD71 204 aaPredicted RBP12.64□□□□□ -0.39
VNN3-212ENST00000519686 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
VNN3-212ENST00000519686 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
VNN3-212ENST00000519686 PCGF6Q9BYE7 350 aa12.63□□□□□ -0.39
VNN3-212ENST00000519686 SPON1Q9HCB6 807 aa12.63□□□□□ -0.39
VNN3-212ENST00000519686 NHSQ6T4R5 1651 aa12.63□□□□□ -0.39
VNN3-212ENST00000519686 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
VNN3-212ENST00000519686 KCNQ2O43526 872 aa12.61□□□□□ -0.39
VNN3-212ENST00000519686 HOXC9P31274 260 aa12.61□□□□□ -0.39
VNN3-212ENST00000519686 TXNRD1Q16881 649 aa12.61□□□□□ -0.39
VNN3-212ENST00000519686 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
VNN3-212ENST00000519686 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
VNN3-212ENST00000519686 TIMELESSQ9UNS1 1208 aa12.61□□□□□ -0.39
VNN3-212ENST00000519686 DDX54Q8TDD1 881 aaKnown RBP12.6□□□□□ -0.39
VNN3-212ENST00000519686 GGNBP2Q9H3C7 697 aa12.6□□□□□ -0.39
VNN3-212ENST00000519686 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
VNN3-212ENST00000519686 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
VNN3-212ENST00000519686 KIF20BQ96Q89 1820 aa12.59□□□□□ -0.39
VNN3-212ENST00000519686 FBLN1P23142 703 aa12.59□□□□□ -0.39
VNN3-212ENST00000519686 CLSPNQ9HAW4 1339 aa12.59□□□□□ -0.39
VNN3-212ENST00000519686 RTL1A6NKG5 1358 aa12.59□□□□□ -0.39
VNN3-212ENST00000519686 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
VNN3-212ENST00000519686 FYB1O15117 783 aa12.58□□□□□ -0.4
VNN3-212ENST00000519686 RRS1Q15050 365 aaKnown RBP12.58□□□□□ -0.4
VNN3-212ENST00000519686 BTAF1O14981 1849 aa12.58□□□□□ -0.4
VNN3-212ENST00000519686 CASZ1Q86V15 1759 aa12.57□□□□□ -0.4
VNN3-212ENST00000519686 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
VNN3-212ENST00000519686 SYTL4Q96C24 671 aaPredicted RBP12.56□□□□□ -0.4
VNN3-212ENST00000519686 RGPD2P0DJD1 1756 aa12.56□□□□□ -0.4
VNN3-212ENST00000519686 MYOM1P52179 1685 aa12.56□□□□□ -0.4
VNN3-212ENST00000519686 ZBTB7AO95365 584 aa12.56□□□□□ -0.4
VNN3-212ENST00000519686 ZCRB1Q8TBF4 217 aaKnown RBP12.56□□□□□ -0.4
VNN3-212ENST00000519686 RAPGEF4Q8WZA2 1011 aa12.55□□□□□ -0.4
VNN3-212ENST00000519686 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
VNN3-212ENST00000519686 PDGFDQ9GZP0 370 aaPredicted RBP12.55□□□□□ -0.4
VNN3-212ENST00000519686 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
VNN3-212ENST00000519686 FLT4P35916 1363 aa12.54□□□□□ -0.4
VNN3-212ENST00000519686 DOT1LQ8TEK3 1739 aa12.54□□□□□ -0.4
VNN3-212ENST00000519686 MEGF6O75095 1541 aa12.53□□□□□ -0.4
VNN3-212ENST00000519686 INSRP06213 1382 aa12.53□□□□□ -0.4
VNN3-212ENST00000519686 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
VNN3-212ENST00000519686 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
VNN3-212ENST00000519686 NBPF6Q5VWK0 638 aa12.53□□□□□ -0.4
VNN3-212ENST00000519686 USHBP1Q8N6Y0 703 aa12.53□□□□□ -0.4
VNN3-212ENST00000519686 CCER1Q8TC90 406 aaPredicted RBP12.53□□□□□ -0.4
VNN3-212ENST00000519686 NBPF4Q96M43 638 aa12.53□□□□□ -0.4
VNN3-212ENST00000519686 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
VNN3-212ENST00000519686 KIF24Q5T7B8 1368 aa12.52□□□□□ -0.41
VNN3-212ENST00000519686 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.41
VNN3-212ENST00000519686 PRIM1P49642 420 aaKnown RBP12.52□□□□□ -0.41
VNN3-212ENST00000519686 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
VNN3-212ENST00000519686 HSP90AB2PQ58FF8 381 aa12.52□□□□□ -0.41
VNN3-212ENST00000519686 SLC27A3Q5K4L6 730 aa12.52□□□□□ -0.41
VNN3-212ENST00000519686 POTEHQ6S545 545 aa12.52□□□□□ -0.41
VNN3-212ENST00000519686 MTFR1LQ9H019 292 aa12.52□□□□□ -0.41
VNN3-212ENST00000519686 SHANK3Q9BYB0 1731 aa12.51□□□□□ -0.41
VNN3-212ENST00000519686 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
VNN3-212ENST00000519686 EIF4G2P78344 907 aaKnown RBP eCLIP12.5□□□□□ -0.41
VNN3-212ENST00000519686 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
VNN3-212ENST00000519686 LRRC4BQ9NT99 713 aa12.5□□□□□ -0.41
VNN3-212ENST00000519686 PCDH11XQ9BZA7 1347 aa12.49□□□□□ -0.41
VNN3-212ENST00000519686 PCDH11YQ9BZA8 1340 aa12.49□□□□□ -0.41
VNN3-212ENST00000519686 PTGER2P43116 358 aa12.49□□□□□ -0.41
VNN3-212ENST00000519686 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
VNN3-212ENST00000519686 EMILIN1Q9Y6C2 1016 aa12.49□□□□□ -0.41
VNN3-212ENST00000519686 ZNF827Q17R98 1081 aa12.48□□□□□ -0.41
VNN3-212ENST00000519686 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
VNN3-212ENST00000519686 TFCP2L1Q9NZI6 479 aa12.48□□□□□ -0.41
VNN3-212ENST00000519686 YY1P25490 414 aa12.47□□□□□ -0.41
VNN3-212ENST00000519686 KCNQ4P56696 695 aa12.47□□□□□ -0.41
VNN3-212ENST00000519686 CCNL1Q9UK58 526 aaPredicted RBP12.47□□□□□ -0.41
VNN3-212ENST00000519686 LY75O60449 1722 aa12.47□□□□□ -0.41
VNN3-212ENST00000519686 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.41
VNN3-212ENST00000519686 FHDC1Q9C0D6 1143 aaPredicted RBP12.46□□□□□ -0.41
VNN3-212ENST00000519686 ANKRD26Q9UPS8 1709 aa12.46□□□□□ -0.41
VNN3-212ENST00000519686 NSD2O96028 1365 aa12.46□□□□□ -0.41
VNN3-212ENST00000519686 HSPA5P11021 654 aaKnown RBP12.45□□□□□ -0.42
VNN3-212ENST00000519686 TNNT2P45379 298 aaPredicted RBP12.45□□□□□ -0.42
VNN3-212ENST00000519686 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
VNN3-212ENST00000519686 ARXQ96QS3 562 aa12.45□□□□□ -0.42
VNN3-212ENST00000519686 WASHC2AQ641Q2 1341 aa12.45□□□□□ -0.42
VNN3-212ENST00000519686 HMGB2P26583 209 aaKnown RBP12.44□□□□□ -0.42
VNN3-212ENST00000519686 POLD1P28340 1107 aa12.44□□□□□ -0.42
VNN3-212ENST00000519686 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
VNN3-212ENST00000519686 SLC16A10Q8TF71 515 aa12.44□□□□□ -0.42
VNN3-212ENST00000519686 SYT17Q9BSW7 474 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms