RNA–Protein interactions for RNA: ENST00000519259.5

SREK1-206, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 9,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-206ENST00000519259 RFC4P35249 363 aa4.84□□□□□ -1.63
SREK1-206ENST00000519259 FAM83GA6ND36 823 aa4.84□□□□□ -1.63
SREK1-206ENST00000519259 HNRNPUQ00839 825 aaKnown RBP eCLIP4.84□□□□□ -1.63
SREK1-206ENST00000519259 LAS1LQ9Y4W2 734 aaKnown RBP4.84□□□□□ -1.63
SREK1-206ENST00000519259 IQGAP3Q86VI3 1631 aa4.84□□□□□ -1.63
SREK1-206ENST00000519259 RPS6KA4O75676 772 aa4.84□□□□□ -1.64
SREK1-206ENST00000519259 TXNRD1Q16881 649 aa4.84□□□□□ -1.64
SREK1-206ENST00000519259 TRAPPC3LQ5T215 181 aa4.84□□□□□ -1.64
SREK1-206ENST00000519259 TFCP2L1Q9NZI6 479 aa4.84□□□□□ -1.64
SREK1-206ENST00000519259 GNAI3P08754 354 aa4.84□□□□□ -1.64
SREK1-206ENST00000519259 LRRFIP1Q32MZ4 808 aaKnown RBP4.84□□□□□ -1.64
SREK1-206ENST00000519259 TAF7LQ5H9L4 462 aa4.84□□□□□ -1.64
SREK1-206ENST00000519259 IFT57Q9NWB7 429 aa4.84□□□□□ -1.64
SREK1-206ENST00000519259 SOCS7O14512 581 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 RNMTO43148 476 aaKnown RBP4.83□□□□□ -1.64
SREK1-206ENST00000519259 IL13P35225 146 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 NEUROD2Q15784 382 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 LARP1Q6PKG0 1096 aaKnown RBP4.83□□□□□ -1.64
SREK1-206ENST00000519259 TPTE2Q6XPS3 522 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 RNF123Q5XPI4 1314 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 RRS1Q15050 365 aaKnown RBP4.83□□□□□ -1.64
SREK1-206ENST00000519259 HSP90AB2PQ58FF8 381 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 DBF4Q9UBU7 674 aaPredicted RBP4.83□□□□□ -1.64
SREK1-206ENST00000519259 ALKQ9UM73 1620 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 ASXL1Q8IXJ9 1541 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 MROH1Q8NDA8 1641 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 CPSF1Q10570 1443 aaKnown RBP4.83□□□□□ -1.64
SREK1-206ENST00000519259 SSH2Q76I76 1423 aa4.83□□□□□ -1.64
SREK1-206ENST00000519259 ADAMTSL3P82987 1691 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 PER1O15534 1290 aaPredicted RBP4.82□□□□□ -1.64
SREK1-206ENST00000519259 RIC3Q7Z5B4 369 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 EYA3Q99504 573 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 KIF16BQ96L93 1317 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 ST5P78524 1137 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 CNKSR1Q969H4 720 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 NBPF6Q5VWK0 638 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 NBPF4Q96M43 638 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 ERICH6BQ5W0A0 696 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 BCORL1Q5H9F3 1711 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 BTBD11A6QL63 1104 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 HYPKQ9NX55 129 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 APAF1O14727 1248 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 ALDH1L1O75891 902 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 CARD14Q9BXL6 1004 aa4.82□□□□□ -1.64
SREK1-206ENST00000519259 SSFA2P28290 1259 aa4.81□□□□□ -1.64
SREK1-206ENST00000519259 HDGFL1Q5TGJ6 251 aa4.81□□□□□ -1.64
SREK1-206ENST00000519259 WDHD1O75717 1129 aaPredicted RBP4.81□□□□□ -1.64
SREK1-206ENST00000519259 IL6STP40189 918 aaPredicted RBP4.81□□□□□ -1.64
SREK1-206ENST00000519259 NCAPD2Q15021 1401 aa4.81□□□□□ -1.64
SREK1-206ENST00000519259 CDK12Q9NYV4 1490 aaPredicted RBP4.81□□□□□ -1.64
SREK1-206ENST00000519259 MPRIPQ6WCQ1 1025 aa4.81□□□□□ -1.64
SREK1-206ENST00000519259 DDX21Q9NR30 783 aaKnown RBP eCLIP4.81□□□□□ -1.64
SREK1-206ENST00000519259 RRP7AQ9Y3A4 280 aaKnown RBP4.81□□□□□ -1.64
SREK1-206ENST00000519259 ZNF330Q9Y3S2 320 aaPredicted RBP4.81□□□□□ -1.64
SREK1-206ENST00000519259 TMPOP42166 694 aaKnown RBP4.8□□□□□ -1.64
SREK1-206ENST00000519259 NEXMIFQ5QGS0 1516 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 SRCIN1Q9C0H9 1055 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 SLC52A2Q9HAB3 445 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 HMOX1P09601 288 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 ATP6V1AP38606 617 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 NLRP3Q96P20 1036 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 PRIM1P49642 420 aaKnown RBP4.8□□□□□ -1.64
SREK1-206ENST00000519259 SLC15A2Q16348 729 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 CLEC4GQ6UXB4 293 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 TWISTNBQ3B726 338 aaPredicted RBP4.8□□□□□ -1.64
SREK1-206ENST00000519259 ALDH1L2Q3SY69 923 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 GCC2Q8IWJ2 1684 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 MTHFSDQ2M296 383 aaKnown RBP4.8□□□□□ -1.64
SREK1-206ENST00000519259 ZKSCAN2Q63HK3 967 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 CHMP4CQ96CF2 233 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 MMP14P50281 582 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 CCT4P50991 539 aaKnown RBP4.8□□□□□ -1.64
SREK1-206ENST00000519259 POTEAQ6S8J7 498 aa4.8□□□□□ -1.64
SREK1-206ENST00000519259 KIDINS220Q9ULH0 1771 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 ALDH1B1P30837 517 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 CDC5LQ99459 802 aaKnown RBP4.79□□□□□ -1.64
SREK1-206ENST00000519259 FTSJ3Q8IY81 847 aaKnown RBP4.79□□□□□ -1.64
SREK1-206ENST00000519259 SETDB2Q96T68 719 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 ARHGAP45Q92619 1136 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 MROH2AA6NES4 1674 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 ERC1Q8IUD2 1116 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 RPAP2Q8IXW5 612 aaPredicted RBP4.79□□□□□ -1.64
SREK1-206ENST00000519259 LOC102724428A0A0B4J2F2 783 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 ERVV-1B6SEH8 477 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 LDHCP07864 332 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 SIK1P57059 783 aa4.79□□□□□ -1.64
SREK1-206ENST00000519259 NOL10Q9BSC4 688 aaKnown RBP4.79□□□□□ -1.64
SREK1-206ENST00000519259 EIF2S2P20042 333 aaKnown RBP4.78□□□□□ -1.64
SREK1-206ENST00000519259 GNL3LQ9NVN8 582 aaKnown RBP4.78□□□□□ -1.64
SREK1-206ENST00000519259 FBXO3Q9UK99 471 aa4.78□□□□□ -1.64
SREK1-206ENST00000519259 IGHMBP2P38935 993 aaKnown RBP4.78□□□□□ -1.64
SREK1-206ENST00000519259 FKBP5Q13451 457 aaPredicted RBP4.78□□□□□ -1.64
SREK1-206ENST00000519259 DDX46Q7L014 1031 aaKnown RBP4.78□□□□□ -1.64
SREK1-206ENST00000519259 DZIP3Q86Y13 1208 aaKnown RBP4.78□□□□□ -1.64
SREK1-206ENST00000519259 TMED8Q6PL24 325 aaPredicted RBP4.78□□□□□ -1.64
SREK1-206ENST00000519259 RBM17Q96I25 401 aaKnown RBP4.78□□□□□ -1.64
SREK1-206ENST00000519259 ANKRD2Q9GZV1 360 aa4.78□□□□□ -1.64
SREK1-206ENST00000519259 MTFR1LQ9H019 292 aa4.78□□□□□ -1.64
SREK1-206ENST00000519259 UPF1Q92900 1129 aaKnown RBP eCLIP4.77□□□□□ -1.65
SREK1-206ENST00000519259 H0YIN7 160 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms