RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 LNPKQ9C0E8 428 aa21.04■□□□□ 0.96
CHMP7-203ENST00000517325 MTHFSDQ2M296 383 aaKnown RBP21.04■□□□□ 0.96
CHMP7-203ENST00000517325 EYA1Q99502 592 aa21.04■□□□□ 0.96
CHMP7-203ENST00000517325 NUTM2GQ5VZR2 741 aa21.03■□□□□ 0.96
CHMP7-203ENST00000517325 IGSF1Q8N6C5 1336 aa21.03■□□□□ 0.96
CHMP7-203ENST00000517325 SIRT2Q8IXJ6 389 aa21.03■□□□□ 0.96
CHMP7-203ENST00000517325 MARF1Q9Y4F3 1742 aaKnown RBP21.02■□□□□ 0.96
CHMP7-203ENST00000517325 CHD1LQ86WJ1 897 aa21.02■□□□□ 0.96
CHMP7-203ENST00000517325 KIAA0232Q92628 1395 aa21.02■□□□□ 0.96
CHMP7-203ENST00000517325 RGS12O14924 1447 aa21■□□□□ 0.95
CHMP7-203ENST00000517325 MIS18AQ9NYP9 233 aa21■□□□□ 0.95
CHMP7-203ENST00000517325 GCC1Q96CN9 775 aa20.99■□□□□ 0.95
CHMP7-203ENST00000517325 HOXC9P31274 260 aa20.98■□□□□ 0.95
CHMP7-203ENST00000517325 HAP1P54257 671 aaPredicted RBP20.98■□□□□ 0.95
CHMP7-203ENST00000517325 ANKRD45Q5TZF3 282 aa20.98■□□□□ 0.95
CHMP7-203ENST00000517325 KIF24Q5T7B8 1368 aa20.97■□□□□ 0.95
CHMP7-203ENST00000517325 ANKLE2Q86XL3 938 aa20.97■□□□□ 0.95
CHMP7-203ENST00000517325 ABTB2Q8N961 1025 aa20.97■□□□□ 0.95
CHMP7-203ENST00000517325 RBM33Q96EV2 1170 aaKnown RBP20.97■□□□□ 0.95
CHMP7-203ENST00000517325 MFAP1P55081 439 aaKnown RBP20.97■□□□□ 0.95
CHMP7-203ENST00000517325 BECN1Q14457 450 aa20.97■□□□□ 0.95
CHMP7-203ENST00000517325 INTS3Q68E01 1043 aaKnown RBP20.97■□□□□ 0.95
CHMP7-203ENST00000517325 RTF1Q92541 710 aaKnown RBP20.97■□□□□ 0.95
CHMP7-203ENST00000517325 CHD2O14647 1828 aaKnown RBP20.97■□□□□ 0.95
CHMP7-203ENST00000517325 USP54Q70EL1 1684 aa20.97■□□□□ 0.95
CHMP7-203ENST00000517325 UBE2Q2Q8WVN8 375 aa20.96■□□□□ 0.95
CHMP7-203ENST00000517325 NWD1Q149M9 1564 aa20.95■□□□□ 0.94
CHMP7-203ENST00000517325 GAS2L2Q8NHY3 880 aa20.95■□□□□ 0.94
CHMP7-203ENST00000517325 TSPYL4Q9UJ04 414 aa20.95■□□□□ 0.94
CHMP7-203ENST00000517325 PHF8Q9UPP1 1060 aa20.94■□□□□ 0.94
CHMP7-203ENST00000517325 ZNF142P52746 1687 aaPredicted RBP20.94■□□□□ 0.94
CHMP7-203ENST00000517325 C22orf23Q9BZE7 217 aa20.94■□□□□ 0.94
CHMP7-203ENST00000517325 PTPRCP08575 1304 aa20.92■□□□□ 0.94
CHMP7-203ENST00000517325 C14orf37Q86TY3 774 aa20.92■□□□□ 0.94
CHMP7-203ENST00000517325 TBC1D2Q9BYX2 928 aa20.92■□□□□ 0.94
CHMP7-203ENST00000517325 MSH6P52701 1360 aa20.92■□□□□ 0.94
CHMP7-203ENST00000517325 SLC4A2P04920 1241 aa20.91■□□□□ 0.94
CHMP7-203ENST00000517325 LTV1Q96GA3 475 aaPredicted RBP20.91■□□□□ 0.94
CHMP7-203ENST00000517325 BMP2KLQ5H9B9 411 aa20.91■□□□□ 0.94
CHMP7-203ENST00000517325 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
CHMP7-203ENST00000517325 LRRC37A3O60309 1634 aa20.9■□□□□ 0.94
CHMP7-203ENST00000517325 SLKQ9H2G2 1235 aaPredicted RBP20.89■□□□□ 0.93
CHMP7-203ENST00000517325 GNAT3A8MTJ3 354 aa20.88■□□□□ 0.93
CHMP7-203ENST00000517325 HTATSF1O43719 755 aaKnown RBP20.88■□□□□ 0.93
CHMP7-203ENST00000517325 G2E3Q7L622 706 aa20.88■□□□□ 0.93
CHMP7-203ENST00000517325 ADGRL3Q9HAR2 1447 aa20.88■□□□□ 0.93
CHMP7-203ENST00000517325 ANKRD44Q8N8A2 993 aa20.87■□□□□ 0.93
CHMP7-203ENST00000517325 MEIS3Q99687 375 aa20.87■□□□□ 0.93
CHMP7-203ENST00000517325 DCTPP1Q9H773 170 aa20.87■□□□□ 0.93
CHMP7-203ENST00000517325 ADAMTSL3P82987 1691 aa20.87■□□□□ 0.93
CHMP7-203ENST00000517325 RTL1A6NKG5 1358 aa20.87■□□□□ 0.93
CHMP7-203ENST00000517325 USHBP1Q8N6Y0 703 aa20.87■□□□□ 0.93
CHMP7-203ENST00000517325 LTN1O94822 1766 aa20.86■□□□□ 0.93
CHMP7-203ENST00000517325 CEP85Q6P2H3 762 aa20.86■□□□□ 0.93
CHMP7-203ENST00000517325 ANTXR1Q9H6X2 564 aa20.86■□□□□ 0.93
CHMP7-203ENST00000517325 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
CHMP7-203ENST00000517325 NFAT5O94916 1531 aa20.85■□□□□ 0.93
CHMP7-203ENST00000517325 ESCO1Q5FWF5 840 aa20.85■□□□□ 0.93
CHMP7-203ENST00000517325 IL17REQ8NFR9 667 aa20.85■□□□□ 0.93
CHMP7-203ENST00000517325 F6X3S4 739 aa20.84■□□□□ 0.93
CHMP7-203ENST00000517325 RPAP2Q8IXW5 612 aaPredicted RBP20.83■□□□□ 0.93
CHMP7-203ENST00000517325 IP6K1Q92551 441 aa20.83■□□□□ 0.92
CHMP7-203ENST00000517325 PSME1Q06323 249 aa20.82■□□□□ 0.92
CHMP7-203ENST00000517325 RBM25P49756 843 aaKnown RBP20.82■□□□□ 0.92
CHMP7-203ENST00000517325 SLC4A10Q6U841 1118 aa20.82■□□□□ 0.92
CHMP7-203ENST00000517325 NPHP4O75161 1426 aaPredicted RBP20.82■□□□□ 0.92
CHMP7-203ENST00000517325 PLEKHM2Q8IWE5 1019 aa20.81■□□□□ 0.92
CHMP7-203ENST00000517325 TBC1D9Q6ZT07 1266 aa20.81■□□□□ 0.92
CHMP7-203ENST00000517325 FAM43AQ8N2R8 423 aa20.81■□□□□ 0.92
CHMP7-203ENST00000517325 GSPT1P15170 499 aaKnown RBP20.8■□□□□ 0.92
CHMP7-203ENST00000517325 STK31Q9BXU1 1019 aa20.8■□□□□ 0.92
CHMP7-203ENST00000517325 SETD1BQ9UPS6 1966 aaKnown RBP20.8■□□□□ 0.92
CHMP7-203ENST00000517325 FAM208AQ9UK61 1670 aaKnown RBP20.8■□□□□ 0.92
CHMP7-203ENST00000517325 NBPF6Q5VWK0 638 aa20.79■□□□□ 0.92
CHMP7-203ENST00000517325 C16orf71Q8IYS4 520 aaPredicted RBP20.79■□□□□ 0.92
CHMP7-203ENST00000517325 NECTIN2Q92692 538 aa20.79■□□□□ 0.92
CHMP7-203ENST00000517325 NBPF4Q96M43 638 aa20.79■□□□□ 0.92
CHMP7-203ENST00000517325 ARXQ96QS3 562 aa20.79■□□□□ 0.92
CHMP7-203ENST00000517325 CCT4P50991 539 aaKnown RBP20.78■□□□□ 0.92
CHMP7-203ENST00000517325 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
CHMP7-203ENST00000517325 SPRYD3Q8NCJ5 442 aa20.78■□□□□ 0.92
CHMP7-203ENST00000517325 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
CHMP7-203ENST00000517325 ZBTB7CA1YPR0 619 aa20.78■□□□□ 0.92
CHMP7-203ENST00000517325 CCDC30Q5VVM6 783 aa20.78■□□□□ 0.92
CHMP7-203ENST00000517325 FLIIQ13045 1269 aa20.77■□□□□ 0.92
CHMP7-203ENST00000517325 OTUD7AQ8TE49 926 aaPredicted RBP20.77■□□□□ 0.92
CHMP7-203ENST00000517325 XPCQ01831 940 aaPredicted RBP20.76■□□□□ 0.91
CHMP7-203ENST00000517325 KCNH5Q8NCM2 988 aa20.76■□□□□ 0.91
CHMP7-203ENST00000517325 APBB1O00213 710 aa20.75■□□□□ 0.91
CHMP7-203ENST00000517325 SMARCA5O60264 1052 aaPredicted RBP20.75■□□□□ 0.91
CHMP7-203ENST00000517325 RRAGDQ9NQL2 400 aaPredicted RBP20.75■□□□□ 0.91
CHMP7-203ENST00000517325 BABAM1Q9NWV8 329 aa20.75■□□□□ 0.91
CHMP7-203ENST00000517325 CDC45O75419 566 aa20.75■□□□□ 0.91
CHMP7-203ENST00000517325 FKBP5Q13451 457 aaPredicted RBP20.75■□□□□ 0.91
CHMP7-203ENST00000517325 TTC22Q5TAA0 569 aa20.75■□□□□ 0.91
CHMP7-203ENST00000517325 CEMIPQ8WUJ3 1361 aa20.74■□□□□ 0.91
CHMP7-203ENST00000517325 LRRC59Q96AG4 307 aaKnown RBP20.74■□□□□ 0.91
CHMP7-203ENST00000517325 KIF2CQ99661 725 aa20.74■□□□□ 0.91
CHMP7-203ENST00000517325 PHRF1Q9P1Y6 1649 aaKnown RBP20.74■□□□□ 0.91
CHMP7-203ENST00000517325 RGPD2P0DJD1 1756 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms