RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	HAP1	P54257	671 aa	Predicted RBP	5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	RRS1	Q15050	365 aa	Known RBP	5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PROSER2	Q86WR7	435 aa	Predicted RBP	5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	ZNF687	Q8N1G0	1237 aa		5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	RBM33	Q96EV2	1170 aa	Known RBP	5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	RSPH6A	Q9H0K4	717 aa		5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	LRRC7	Q96NW7	1537 aa		5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	USP54	Q70EL1	1684 aa		5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	RGPD8	O14715	1765 aa	Predicted RBP	5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PLEKHG5	O94827	1062 aa		5.87	□□□□□ -1.47
ATP2C1-223	ENST00000515854	ZNF710	Q8N1W2	664 aa		5.87	□□□□□ -1.47
ATP2C1-223	ENST00000515854	TMEM106C	Q9BVX2	250 aa		5.87	□□□□□ -1.47
ATP2C1-223	ENST00000515854	C19orf44	Q9H6X5	657 aa		5.87	□□□□□ -1.47
ATP2C1-223	ENST00000515854	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	5.87	□□□□□ -1.47
ATP2C1-223	ENST00000515854	RRP7A	Q9Y3A4	280 aa	Known RBP	5.87	□□□□□ -1.47
ATP2C1-223	ENST00000515854	MAPK8IP3	Q9UPT6	1336 aa		5.87	□□□□□ -1.47
ATP2C1-223	ENST00000515854	LMTK3	Q96Q04	1460 aa		5.87	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PIK3C2A	O00443	1686 aa		5.87	□□□□□ -1.47
ATP2C1-223	ENST00000515854	MAP2	P11137	1827 aa	Known RBP	5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	C1orf167	Q5SNV9	1468 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	DCC	P43146	1447 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	SBNO1	A3KN83	1393 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	KIF24	Q5T7B8	1368 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	IL16	Q14005	1332 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	MAP3K19	Q56UN5	1328 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	RGL2	O15211	777 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PRKAR2B	P31323	418 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	HSPA2	P54652	639 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	NLRP6	P59044	892 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	EIF4A2	Q14240	407 aa	Known RBP	5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	NEUROD2	Q15784	382 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	ESCO1	Q5FWF5	840 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	C14orf37	Q86TY3	774 aa		5.86	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PEAK1	Q9H792	1746 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	FLT4	P35916	1363 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	TMEM94	Q12767	1356 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	HMOX1	P09601	288 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	RIPK4	P57078	832 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PSME1	Q06323	249 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	NFE2L2	Q16236	605 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	HSP90AB2P	Q58FF8	381 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	ABTB2	Q8N961	1025 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PHACTR3	Q96KR7	559 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	ORAI2	Q96SN7	254 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	MYH16	Q9H6N6	1097 aa		5.85	□□□□□ -1.47
ATP2C1-223	ENST00000515854	MST1R	Q04912	1400 aa		5.84	□□□□□ -1.47
ATP2C1-223	ENST00000515854	NEFM	P07197	916 aa		5.84	□□□□□ -1.47
ATP2C1-223	ENST00000515854	HOXB3	P14651	431 aa	Predicted RBP	5.84	□□□□□ -1.47
ATP2C1-223	ENST00000515854	STRCP1	A6NGW2	1772 aa		5.84	□□□□□ -1.47
ATP2C1-223	ENST00000515854	MARF1	Q9Y4F3	1742 aa	Known RBP	5.84	□□□□□ -1.47
ATP2C1-223	ENST00000515854	STRC	Q7RTU9	1775 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	RTL1	A6NKG5	1358 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	ARHGEF10	O15013	1369 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	RGPD1	P0DJD0	1748 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	KIF1A	Q12756	1690 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	FOXO3	O43524	673 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	PLIN1	O60240	522 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	CT47B1	P0C2W7	299 aa	Predicted RBP	5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	ATF3	P18847	181 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	HOXC9	P31274	260 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	AMPH	P49418	695 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	NUTM2G	Q5VZR2	741 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	KRT28	Q7Z3Y7	464 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	CADPS2	Q86UW7	1296 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	KCNH5	Q8NCM2	988 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	EXOC6	Q8TAG9	804 aa		5.83	□□□□□ -1.48
ATP2C1-223	ENST00000515854	KDR	P35968	1356 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	USP19	O94966	1318 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	IGSF1	Q8N6C5	1336 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	FANCI	Q9NVI1	1328 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	SOX12	O15370	315 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	BCAR3	O75815	825 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	ZNF853	P0CG23	659 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	RARS	P54136	660 aa	Known RBP	5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	CALD1	Q05682	793 aa	Known RBP	5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	LMOD3	Q0VAK6	560 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	SULT6B1	Q6IMI4	303 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	B4GALNT3	Q6L9W6	998 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	AEBP1	Q8IUX7	1158 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	IP6K1	Q92551	441 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	CRBN	Q96SW2	442 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	PCDHB13	Q9Y5F0	798 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	SLIT3	O75094	1523 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	NFAT5	O94916	1531 aa		5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	TRPM3	Q9HCF6	1732 aa	Predicted RBP	5.82	□□□□□ -1.48
ATP2C1-223	ENST00000515854	MSH6	P52701	1360 aa		5.81	□□□□□ -1.48
ATP2C1-223	ENST00000515854	EXOSC9	Q06265	439 aa	Known RBP	5.81	□□□□□ -1.48
ATP2C1-223	ENST00000515854	PDE3A	Q14432	1141 aa		5.81	□□□□□ -1.48
ATP2C1-223	ENST00000515854	C20orf194	Q5TEA3	1177 aa		5.81	□□□□□ -1.48
ATP2C1-223	ENST00000515854	TSR2	Q969E8	191 aa	Known RBP	5.81	□□□□□ -1.48
ATP2C1-223	ENST00000515854	EYA1	Q99502	592 aa		5.81	□□□□□ -1.48
ATP2C1-223	ENST00000515854	IFT57	Q9NWB7	429 aa		5.81	□□□□□ -1.48
ATP2C1-223	ENST00000515854	PHRF1	Q9P1Y6	1649 aa	Known RBP	5.81	□□□□□ -1.48
ATP2C1-223	ENST00000515854	GC	P02774	474 aa		5.8	□□□□□ -1.48
ATP2C1-223	ENST00000515854	GNAI1	P63096	354 aa		5.8	□□□□□ -1.48
ATP2C1-223	ENST00000515854	XPC	Q01831	940 aa	Predicted RBP	5.8	□□□□□ -1.48
ATP2C1-223	ENST00000515854	ARHGEF25	Q86VW2	580 aa		5.8	□□□□□ -1.48
ATP2C1-223	ENST00000515854	CCDC136	Q96JN2	1154 aa		5.8	□□□□□ -1.48
ATP2C1-223	ENST00000515854	NPHP3	Q7Z494	1330 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms