RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 CCDC61Q9Y6R9 512 aa10.15□□□□□ -0.78
DDR1-273ENST00000513514 SOS1Q07889 1333 aaPredicted RBP10.14□□□□□ -0.79
DDR1-273ENST00000513514 SOS2Q07890 1332 aaPredicted RBP10.14□□□□□ -0.79
DDR1-273ENST00000513514 WASLO00401 505 aaPredicted RBP10.14□□□□□ -0.79
DDR1-273ENST00000513514 GGNBP2Q9H3C7 697 aa10.14□□□□□ -0.79
DDR1-273ENST00000513514 CABP1Q9NZU7 370 aa10.14□□□□□ -0.79
DDR1-273ENST00000513514 CHMP5Q9NZZ3 219 aa10.14□□□□□ -0.79
DDR1-273ENST00000513514 POLKQ9UBT6 870 aa10.14□□□□□ -0.79
DDR1-273ENST00000513514 MINK1Q8N4C8 1332 aaPredicted RBP10.13□□□□□ -0.79
DDR1-273ENST00000513514 PSDA5PKW4 1024 aaPredicted RBP10.13□□□□□ -0.79
DDR1-273ENST00000513514 ITPRIPQ8IWB1 547 aa10.13□□□□□ -0.79
DDR1-273ENST00000513514 C22orf23Q9BZE7 217 aa10.13□□□□□ -0.79
DDR1-273ENST00000513514 ANTXR1Q9H6X2 564 aa10.13□□□□□ -0.79
DDR1-273ENST00000513514 NOB1Q9ULX3 412 aaKnown RBP10.13□□□□□ -0.79
DDR1-273ENST00000513514 IL13P35225 146 aa10.12□□□□□ -0.79
DDR1-273ENST00000513514 XPCQ01831 940 aaPredicted RBP10.12□□□□□ -0.79
DDR1-273ENST00000513514 COG3Q96JB2 828 aa10.12□□□□□ -0.79
DDR1-273ENST00000513514 CHMP4AQ9BY43 222 aa10.12□□□□□ -0.79
DDR1-273ENST00000513514 STK26Q9P289 416 aa10.12□□□□□ -0.79
DDR1-273ENST00000513514 KIAA0232Q92628 1395 aa10.12□□□□□ -0.79
DDR1-273ENST00000513514 ROBO2Q9HCK4 1378 aa10.12□□□□□ -0.79
DDR1-273ENST00000513514 PXDNQ92626 1479 aa10.11□□□□□ -0.79
DDR1-273ENST00000513514 MARF1Q9Y4F3 1742 aaKnown RBP10.11□□□□□ -0.79
DDR1-273ENST00000513514 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
DDR1-273ENST00000513514 VAMP4O75379 141 aa10.11□□□□□ -0.79
DDR1-273ENST00000513514 CHD1LQ86WJ1 897 aa10.11□□□□□ -0.79
DDR1-273ENST00000513514 HSCBQ8IWL3 235 aa10.11□□□□□ -0.79
DDR1-273ENST00000513514 BRWD3Q6RI45 1802 aa10.11□□□□□ -0.79
DDR1-273ENST00000513514 ABCC4O15439 1325 aa10.1□□□□□ -0.79
DDR1-273ENST00000513514 TTC21BQ7Z4L5 1316 aa10.1□□□□□ -0.79
DDR1-273ENST00000513514 PLEKHG3A1L390 1219 aa10.1□□□□□ -0.79
DDR1-273ENST00000513514 ZBTB7BO15156 539 aaPredicted RBP10.1□□□□□ -0.79
DDR1-273ENST00000513514 PRKAR2BP31323 418 aa10.1□□□□□ -0.79
DDR1-273ENST00000513514 SKOR2Q2VWA4 1001 aaPredicted RBP10.1□□□□□ -0.79
DDR1-273ENST00000513514 TMEM57Q8N5G2 664 aa10.1□□□□□ -0.79
DDR1-273ENST00000513514 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
DDR1-273ENST00000513514 MON2Q7Z3U7 1717 aa10.1□□□□□ -0.79
DDR1-273ENST00000513514 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.1□□□□□ -0.79
DDR1-273ENST00000513514 PTPRCP08575 1304 aa10.09□□□□□ -0.79
DDR1-273ENST00000513514 CCDC125Q86Z20 511 aa10.09□□□□□ -0.79
DDR1-273ENST00000513514 RPAP2Q8IXW5 612 aaPredicted RBP10.09□□□□□ -0.79
DDR1-273ENST00000513514 MRPL50Q8N5N7 158 aaKnown RBP10.09□□□□□ -0.79
DDR1-273ENST00000513514 TSR2Q969E8 191 aaKnown RBP10.09□□□□□ -0.79
DDR1-273ENST00000513514 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
DDR1-273ENST00000513514 BABAM1Q9NWV8 329 aa10.09□□□□□ -0.79
DDR1-273ENST00000513514 TTC21AQ8NDW8 1320 aa10.08□□□□□ -0.8
DDR1-273ENST00000513514 HTATSF1O43719 755 aaKnown RBP10.08□□□□□ -0.8
DDR1-273ENST00000513514 FRAT2O75474 233 aaPredicted RBP10.08□□□□□ -0.8
DDR1-273ENST00000513514 INTS3Q68E01 1043 aaKnown RBP10.08□□□□□ -0.8
DDR1-273ENST00000513514 SKAP1Q86WV1 359 aa10.08□□□□□ -0.8
DDR1-273ENST00000513514 NUDT16Q96DE0 195 aaKnown RBP10.08□□□□□ -0.8
DDR1-273ENST00000513514 NRKQ7Z2Y5 1582 aa10.08□□□□□ -0.8
DDR1-273ENST00000513514 AKAP12Q02952 1782 aa10.08□□□□□ -0.8
DDR1-273ENST00000513514 SLIT2O94813 1529 aa10.07□□□□□ -0.8
DDR1-273ENST00000513514 EPB41L2O43491 1005 aaKnown RBP10.07□□□□□ -0.8
DDR1-273ENST00000513514 SEC24BO95487 1268 aa10.07□□□□□ -0.8
DDR1-273ENST00000513514 SAFB2Q14151 953 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDR1-273ENST00000513514 BCL2L13Q9BXK5 485 aa10.07□□□□□ -0.8
DDR1-273ENST00000513514 ARHGEF10O15013 1369 aa10.06□□□□□ -0.8
DDR1-273ENST00000513514 USP31Q70CQ4 1352 aa10.06□□□□□ -0.8
DDR1-273ENST00000513514 MAP2P11137 1827 aaKnown RBP10.06□□□□□ -0.8
DDR1-273ENST00000513514 TWISTNBQ3B726 338 aaPredicted RBP10.06□□□□□ -0.8
DDR1-273ENST00000513514 CASC1Q6TDU7 716 aa10.06□□□□□ -0.8
DDR1-273ENST00000513514 CLEC17AQ6ZS10 378 aa10.06□□□□□ -0.8
DDR1-273ENST00000513514 FAM43AQ8N2R8 423 aa10.06□□□□□ -0.8
DDR1-273ENST00000513514 GBP4Q96PP9 640 aa10.06□□□□□ -0.8
DDR1-273ENST00000513514 ITSN1Q15811 1721 aa10.05□□□□□ -0.8
DDR1-273ENST00000513514 MCM4P33991 863 aa10.05□□□□□ -0.8
DDR1-273ENST00000513514 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
DDR1-273ENST00000513514 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
DDR1-273ENST00000513514 RTL1A6NKG5 1358 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 PLCH1Q4KWH8 1693 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 NUTM2FA1L443 756 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 CHL1O00533 1208 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 FOXO3O43524 673 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 HMMRO75330 724 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 CDC45O75419 566 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 PLEKHG5O94827 1062 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 DDIT3P35638 169 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 ESCO1Q5FWF5 840 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 UNC5CLQ8IV45 518 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 KLHL34Q8N239 644 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 DCTPP1Q9H773 170 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 MBIPQ9NS73 344 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 NPHP3Q7Z494 1330 aa10.04□□□□□ -0.8
DDR1-273ENST00000513514 GOLGA6L22H0YM25 854 aa10.03□□□□□ -0.8
DDR1-273ENST00000513514 SF3B2Q13435 895 aaKnown RBP10.03□□□□□ -0.8
DDR1-273ENST00000513514 CWC22Q9HCG8 908 aaKnown RBP10.03□□□□□ -0.8
DDR1-273ENST00000513514 OVOS2A0A0J9YW53 1432 aa10.02□□□□□ -0.81
DDR1-273ENST00000513514 OVOS2Q6IE36 1432 aa10.02□□□□□ -0.81
DDR1-273ENST00000513514 MRE11P49959 708 aa10.02□□□□□ -0.81
DDR1-273ENST00000513514 R3HDM1Q15032 1099 aaKnown RBP10.02□□□□□ -0.81
DDR1-273ENST00000513514 RABEP1Q15276 862 aa10.02□□□□□ -0.81
DDR1-273ENST00000513514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.02□□□□□ -0.81
DDR1-273ENST00000513514 ANKRD44Q8N8A2 993 aa10.02□□□□□ -0.81
DDR1-273ENST00000513514 IBTKQ9P2D0 1353 aaPredicted RBP10.01□□□□□ -0.81
DDR1-273ENST00000513514 FSD2A1L4K1 749 aa10.01□□□□□ -0.81
DDR1-273ENST00000513514 GOLGA6L3A6NEY3 463 aa10.01□□□□□ -0.81
DDR1-273ENST00000513514 MCM2P49736 904 aa10.01□□□□□ -0.81
DDR1-273ENST00000513514 CCT4P50991 539 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms