RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 SPATA31D1Q6ZQQ2 1576 aa13.01□□□□□ -0.33
PDCD6-209ENST00000512466 AMPHP49418 695 aa13.01□□□□□ -0.33
PDCD6-209ENST00000512466 ZFYVE9O95405 1425 aa13□□□□□ -0.33
PDCD6-209ENST00000512466 YTHDC2Q9H6S0 1430 aaKnown RBP13□□□□□ -0.33
PDCD6-209ENST00000512466 LMOD3Q0VAK6 560 aa13□□□□□ -0.33
PDCD6-209ENST00000512466 RABEP1Q15276 862 aa13□□□□□ -0.33
PDCD6-209ENST00000512466 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
PDCD6-209ENST00000512466 PTMSP20962 102 aa13□□□□□ -0.33
PDCD6-209ENST00000512466 CDK11BP21127 795 aaKnown RBP13□□□□□ -0.33
PDCD6-209ENST00000512466 AEBP2Q6ZN18 517 aaPredicted RBP13□□□□□ -0.33
PDCD6-209ENST00000512466 CT47B1P0C2W7 299 aaPredicted RBP13□□□□□ -0.33
PDCD6-209ENST00000512466 DRC7Q8IY82 874 aa13□□□□□ -0.33
PDCD6-209ENST00000512466 VAMP4O75379 141 aa12.99□□□□□ -0.33
PDCD6-209ENST00000512466 MEIS3Q99687 375 aa12.99□□□□□ -0.33
PDCD6-209ENST00000512466 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
PDCD6-209ENST00000512466 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
PDCD6-209ENST00000512466 ZBTB7BO15156 539 aaPredicted RBP12.98□□□□□ -0.33
PDCD6-209ENST00000512466 KIAA2012Q0VF49 1180 aa12.98□□□□□ -0.33
PDCD6-209ENST00000512466 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
PDCD6-209ENST00000512466 FER1L4A9Z1Z3 1794 aa12.98□□□□□ -0.33
PDCD6-209ENST00000512466 RIMS1Q86UR5 1692 aaKnown RBP12.98□□□□□ -0.33
PDCD6-209ENST00000512466 PIK3C2BO00750 1634 aa12.98□□□□□ -0.33
PDCD6-209ENST00000512466 MADDQ8WXG6 1647 aa12.98□□□□□ -0.33
PDCD6-209ENST00000512466 SDSP20132 328 aa12.98□□□□□ -0.33
PDCD6-209ENST00000512466 PRIM1P49642 420 aaKnown RBP12.98□□□□□ -0.33
PDCD6-209ENST00000512466 RAB3GAP1Q15042 981 aa12.98□□□□□ -0.33
PDCD6-209ENST00000512466 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
PDCD6-209ENST00000512466 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
PDCD6-209ENST00000512466 PTPRMP28827 1452 aa12.97□□□□□ -0.33
PDCD6-209ENST00000512466 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
PDCD6-209ENST00000512466 FIBPO43427 364 aa12.97□□□□□ -0.33
PDCD6-209ENST00000512466 ZSCAN30Q86W11 494 aa12.97□□□□□ -0.33
PDCD6-209ENST00000512466 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
PDCD6-209ENST00000512466 A0A1W2PP64 1363 aa12.97□□□□□ -0.33
PDCD6-209ENST00000512466 PLEKHG1Q9ULL1 1385 aa12.97□□□□□ -0.33
PDCD6-209ENST00000512466 ERBB4Q15303 1308 aa12.97□□□□□ -0.33
PDCD6-209ENST00000512466 MRPL50Q8N5N7 158 aaKnown RBP12.97□□□□□ -0.33
PDCD6-209ENST00000512466 METP08581 1390 aa12.96□□□□□ -0.33
PDCD6-209ENST00000512466 VPS37CA5D8V6 355 aaPredicted RBP12.96□□□□□ -0.33
PDCD6-209ENST00000512466 FGD1P98174 961 aa12.96□□□□□ -0.33
PDCD6-209ENST00000512466 NUTM1Q86Y26 1132 aa12.96□□□□□ -0.33
PDCD6-209ENST00000512466 WASLO00401 505 aaPredicted RBP12.96□□□□□ -0.34
PDCD6-209ENST00000512466 ZSCAN23Q3MJ62 389 aa12.96□□□□□ -0.34
PDCD6-209ENST00000512466 SIGLEC1Q9BZZ2 1709 aa12.95□□□□□ -0.34
PDCD6-209ENST00000512466 KCNA6P17658 529 aa12.95□□□□□ -0.34
PDCD6-209ENST00000512466 FOSBP53539 338 aa12.95□□□□□ -0.34
PDCD6-209ENST00000512466 ALDH1L2Q3SY69 923 aa12.95□□□□□ -0.34
PDCD6-209ENST00000512466 ERC2O15083 957 aa12.95□□□□□ -0.34
PDCD6-209ENST00000512466 SPC24Q8NBT2 197 aa12.95□□□□□ -0.34
PDCD6-209ENST00000512466 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
PDCD6-209ENST00000512466 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.95□□□□□ -0.34
PDCD6-209ENST00000512466 PLEKHM2Q8IWE5 1019 aa12.95□□□□□ -0.34
PDCD6-209ENST00000512466 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
PDCD6-209ENST00000512466 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
PDCD6-209ENST00000512466 NEXMIFQ5QGS0 1516 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 UQCRHLA0A096LP55 91 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 FAM177BA6PVY3 158 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 UQCRHP07919 91 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 TPM2P07951 284 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
PDCD6-209ENST00000512466 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
PDCD6-209ENST00000512466 SYAP1Q96A49 352 aaPredicted RBP12.94□□□□□ -0.34
PDCD6-209ENST00000512466 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
PDCD6-209ENST00000512466 TMEM131LA2VDJ0 1609 aa12.93□□□□□ -0.34
PDCD6-209ENST00000512466 FOXO3O43524 673 aa12.93□□□□□ -0.34
PDCD6-209ENST00000512466 SETD1BQ9UPS6 1966 aaKnown RBP12.93□□□□□ -0.34
PDCD6-209ENST00000512466 GSPT1P15170 499 aaKnown RBP12.93□□□□□ -0.34
PDCD6-209ENST00000512466 ATF3P18847 181 aa12.93□□□□□ -0.34
PDCD6-209ENST00000512466 TTC22Q5TAA0 569 aa12.93□□□□□ -0.34
PDCD6-209ENST00000512466 RBSNQ9H1K0 784 aa12.93□□□□□ -0.34
PDCD6-209ENST00000512466 ANKRD36BQ8N2N9 1353 aa12.93□□□□□ -0.34
PDCD6-209ENST00000512466 SNX21Q969T3 373 aa12.93□□□□□ -0.34
PDCD6-209ENST00000512466 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
PDCD6-209ENST00000512466 KLHL40Q2TBA0 621 aa12.92□□□□□ -0.34
PDCD6-209ENST00000512466 PDCL3Q9H2J4 239 aa12.92□□□□□ -0.34
PDCD6-209ENST00000512466 MROH2AA6NES4 1674 aa12.92□□□□□ -0.34
PDCD6-209ENST00000512466 SIRT2Q8IXJ6 389 aa12.92□□□□□ -0.34
PDCD6-209ENST00000512466 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
PDCD6-209ENST00000512466 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
PDCD6-209ENST00000512466 PLEKHF1Q96S99 279 aa12.92□□□□□ -0.34
PDCD6-209ENST00000512466 IFT57Q9NWB7 429 aa12.91□□□□□ -0.34
PDCD6-209ENST00000512466 FERMT3Q86UX7 667 aa12.9□□□□□ -0.34
PDCD6-209ENST00000512466 SIRT1Q96EB6 747 aa12.9□□□□□ -0.34
PDCD6-209ENST00000512466 USP25Q9UHP3 1055 aa12.9□□□□□ -0.34
PDCD6-209ENST00000512466 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
PDCD6-209ENST00000512466 G2E3Q7L622 706 aa12.9□□□□□ -0.34
PDCD6-209ENST00000512466 TSC1Q92574 1164 aa12.9□□□□□ -0.34
PDCD6-209ENST00000512466 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
PDCD6-209ENST00000512466 POLR1AO95602 1720 aaPredicted RBP12.9□□□□□ -0.34
PDCD6-209ENST00000512466 ANXA1P04083 346 aa12.9□□□□□ -0.35
PDCD6-209ENST00000512466 TMX3Q96JJ7 454 aa12.9□□□□□ -0.35
PDCD6-209ENST00000512466 C3P01024 1663 aa12.89□□□□□ -0.35
PDCD6-209ENST00000512466 NRXN1Q9ULB1 1477 aa12.89□□□□□ -0.35
PDCD6-209ENST00000512466 GNAI2P04899 355 aa12.89□□□□□ -0.35
PDCD6-209ENST00000512466 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms