RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 MST1RQ04912 1400 aa17.35■□□□□ 0.37
SNCAIP-217ENST00000512385 AATKQ6ZMQ8 1374 aa17.35■□□□□ 0.37
SNCAIP-217ENST00000512385 FAM83GA6ND36 823 aa17.35■□□□□ 0.37
SNCAIP-217ENST00000512385 TMPOP42166 694 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-217ENST00000512385 RIPK4P57078 832 aa17.35■□□□□ 0.37
SNCAIP-217ENST00000512385 DCTN1Q14203 1278 aa17.35■□□□□ 0.37
SNCAIP-217ENST00000512385 TNPO1Q92973 898 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-217ENST00000512385 MSH6P52701 1360 aa17.34■□□□□ 0.37
SNCAIP-217ENST00000512385 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
SNCAIP-217ENST00000512385 CADPS2Q86UW7 1296 aa17.34■□□□□ 0.37
SNCAIP-217ENST00000512385 TRIM44Q96DX7 344 aaPredicted RBP17.34■□□□□ 0.37
SNCAIP-217ENST00000512385 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.36
SNCAIP-217ENST00000512385 PEAK1Q9H792 1746 aa17.33■□□□□ 0.36
SNCAIP-217ENST00000512385 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.36
SNCAIP-217ENST00000512385 USP31Q70CQ4 1352 aa17.33■□□□□ 0.36
SNCAIP-217ENST00000512385 BRINP3Q76B58 766 aa17.33■□□□□ 0.36
SNCAIP-217ENST00000512385 HSCBQ8IWL3 235 aa17.33■□□□□ 0.36
SNCAIP-217ENST00000512385 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
SNCAIP-217ENST00000512385 CD2BP2O95400 341 aaKnown RBP17.32■□□□□ 0.36
SNCAIP-217ENST00000512385 GCP02774 474 aa17.32■□□□□ 0.36
SNCAIP-217ENST00000512385 HOXC9P31274 260 aa17.31■□□□□ 0.36
SNCAIP-217ENST00000512385 FTSJ3Q8IY81 847 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-217ENST00000512385 LRRC59Q96AG4 307 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-217ENST00000512385 EYA1Q99502 592 aa17.31■□□□□ 0.36
SNCAIP-217ENST00000512385 MVPQ14764 893 aaKnown RBP17.3■□□□□ 0.36
SNCAIP-217ENST00000512385 AXIN2Q9Y2T1 843 aa17.3■□□□□ 0.36
SNCAIP-217ENST00000512385 FCHSD2O94868 740 aa17.3■□□□□ 0.36
SNCAIP-217ENST00000512385 RBM10P98175 930 aaKnown RBP17.3■□□□□ 0.36
SNCAIP-217ENST00000512385 CDK12Q9NYV4 1490 aaPredicted RBP17.29■□□□□ 0.36
SNCAIP-217ENST00000512385 RBM42Q9BTD8 480 aaKnown RBP17.29■□□□□ 0.36
SNCAIP-217ENST00000512385 XIRP1Q702N8 1843 aaKnown RBP17.29■□□□□ 0.36
SNCAIP-217ENST00000512385 CHRNA2Q15822 529 aa17.29■□□□□ 0.36
SNCAIP-217ENST00000512385 ARID3AQ99856 593 aa17.29■□□□□ 0.36
SNCAIP-217ENST00000512385 IQSEC2Q5JU85 1478 aa17.28■□□□□ 0.36
SNCAIP-217ENST00000512385 DDX11L8A8MPP1 907 aa17.28■□□□□ 0.36
SNCAIP-217ENST00000512385 KIAA1211Q6ZU35 1233 aa17.28■□□□□ 0.36
SNCAIP-217ENST00000512385 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
SNCAIP-217ENST00000512385 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.35
SNCAIP-217ENST00000512385 LNPKQ9C0E8 428 aa17.27■□□□□ 0.35
SNCAIP-217ENST00000512385 DDIT3P35638 169 aa17.26■□□□□ 0.35
SNCAIP-217ENST00000512385 MARF1Q9Y4F3 1742 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-217ENST00000512385 FLT4P35916 1363 aa17.26■□□□□ 0.35
SNCAIP-217ENST00000512385 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
SNCAIP-217ENST00000512385 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
SNCAIP-217ENST00000512385 TRIM27P14373 513 aa17.25■□□□□ 0.35
SNCAIP-217ENST00000512385 SBNO1A3KN83 1393 aa17.25■□□□□ 0.35
SNCAIP-217ENST00000512385 MCM10Q7L590 875 aa17.25■□□□□ 0.35
SNCAIP-217ENST00000512385 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
SNCAIP-217ENST00000512385 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
SNCAIP-217ENST00000512385 ZKSCAN2Q63HK3 967 aa17.24■□□□□ 0.35
SNCAIP-217ENST00000512385 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
SNCAIP-217ENST00000512385 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
SNCAIP-217ENST00000512385 SSFA2P28290 1259 aa17.24■□□□□ 0.35
SNCAIP-217ENST00000512385 MIS18AQ9NYP9 233 aa17.23■□□□□ 0.35
SNCAIP-217ENST00000512385 EXOSC9Q06265 439 aaKnown RBP17.22■□□□□ 0.35
SNCAIP-217ENST00000512385 NPHP3Q7Z494 1330 aa17.22■□□□□ 0.35
SNCAIP-217ENST00000512385 NFE2L2Q16236 605 aa17.22■□□□□ 0.35
SNCAIP-217ENST00000512385 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
SNCAIP-217ENST00000512385 MTHFSDQ2M296 383 aaKnown RBP17.21■□□□□ 0.35
SNCAIP-217ENST00000512385 ARHGEF25Q86VW2 580 aa17.21■□□□□ 0.35
SNCAIP-217ENST00000512385 KIF2CQ99661 725 aa17.21■□□□□ 0.35
SNCAIP-217ENST00000512385 RAB3GAP1Q15042 981 aa17.2■□□□□ 0.34
SNCAIP-217ENST00000512385 TMEM57Q8N5G2 664 aa17.2■□□□□ 0.34
SNCAIP-217ENST00000512385 IP6K1Q92551 441 aa17.2■□□□□ 0.34
SNCAIP-217ENST00000512385 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
SNCAIP-217ENST00000512385 NASPP49321 788 aaPredicted RBP17.19■□□□□ 0.34
SNCAIP-217ENST00000512385 PIP4K2BP78356 416 aa17.19■□□□□ 0.34
SNCAIP-217ENST00000512385 KRT24Q2M2I5 525 aa17.19■□□□□ 0.34
SNCAIP-217ENST00000512385 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
SNCAIP-217ENST00000512385 KCNH5Q8NCM2 988 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 GAS2L2Q8NHY3 880 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 SMC5Q8IY18 1101 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 CHAMP1Q96JM3 812 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 GBP4Q96PP9 640 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 C1orf115Q9H7X2 142 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 DCCP43146 1447 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 NFAT5O94916 1531 aa17.18■□□□□ 0.34
SNCAIP-217ENST00000512385 NCLP19338 710 aaKnown RBP17.17■□□□□ 0.34
SNCAIP-217ENST00000512385 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
SNCAIP-217ENST00000512385 IGSF1Q8N6C5 1336 aa17.17■□□□□ 0.34
SNCAIP-217ENST00000512385 RBM25P49756 843 aaKnown RBP17.17■□□□□ 0.34
SNCAIP-217ENST00000512385 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
SNCAIP-217ENST00000512385 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
SNCAIP-217ENST00000512385 R3HCC1Q9Y3T6 440 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-217ENST00000512385 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-217ENST00000512385 LTN1O94822 1766 aa17.16■□□□□ 0.34
SNCAIP-217ENST00000512385 MED1Q15648 1581 aaPredicted RBP17.16■□□□□ 0.34
SNCAIP-217ENST00000512385 TRPM3Q9HCF6 1732 aaPredicted RBP17.16■□□□□ 0.34
SNCAIP-217ENST00000512385 PDCL3Q9H2J4 239 aa17.16■□□□□ 0.34
SNCAIP-217ENST00000512385 AK9Q5TCS8 1911 aa17.16■□□□□ 0.34
SNCAIP-217ENST00000512385 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
SNCAIP-217ENST00000512385 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
SNCAIP-217ENST00000512385 TPM2P07951 284 aa17.15■□□□□ 0.34
SNCAIP-217ENST00000512385 AAMPQ13685 434 aa17.15■□□□□ 0.34
SNCAIP-217ENST00000512385 PXDNQ92626 1479 aa17.15■□□□□ 0.34
SNCAIP-217ENST00000512385 KIAA0232Q92628 1395 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms