RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 RTF1Q92541 710 aaKnown RBP17.71■□□□□ 0.43
AP003555.1-202ENST00000511013 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.43
AP003555.1-202ENST00000511013 CIZ1Q9ULV3 898 aaPredicted RBP17.71■□□□□ 0.43
AP003555.1-202ENST00000511013 CRB1P82279 1406 aa17.71■□□□□ 0.43
AP003555.1-202ENST00000511013 NCOA3Q9Y6Q9 1424 aa17.71■□□□□ 0.43
AP003555.1-202ENST00000511013 FLT4P35916 1363 aa17.71■□□□□ 0.43
AP003555.1-202ENST00000511013 DIP2AQ14689 1571 aa17.71■□□□□ 0.43
AP003555.1-202ENST00000511013 MAP3K19Q56UN5 1328 aa17.7■□□□□ 0.42
AP003555.1-202ENST00000511013 RGS12O14924 1447 aa17.69■□□□□ 0.42
AP003555.1-202ENST00000511013 PLEKHM2Q8IWE5 1019 aa17.69■□□□□ 0.42
AP003555.1-202ENST00000511013 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
AP003555.1-202ENST00000511013 GAS2L2Q8NHY3 880 aa17.69■□□□□ 0.42
AP003555.1-202ENST00000511013 BRPF3Q9ULD4 1205 aa17.69■□□□□ 0.42
AP003555.1-202ENST00000511013 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
AP003555.1-202ENST00000511013 HSP90AB1P08238 724 aaKnown RBP17.68■□□□□ 0.42
AP003555.1-202ENST00000511013 RIMS1Q86UR5 1692 aaKnown RBP17.68■□□□□ 0.42
AP003555.1-202ENST00000511013 THEMISQ8N1K5 641 aaPredicted RBP17.68■□□□□ 0.42
AP003555.1-202ENST00000511013 KDRP35968 1356 aa17.67■□□□□ 0.42
AP003555.1-202ENST00000511013 DDX11L8A8MPP1 907 aa17.67■□□□□ 0.42
AP003555.1-202ENST00000511013 AMPHP49418 695 aa17.67■□□□□ 0.42
AP003555.1-202ENST00000511013 HMMRO75330 724 aa17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 DDIT3P35638 169 aa17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 KRT24Q2M2I5 525 aa17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 CEP85Q6P2H3 762 aa17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 ATP10DQ9P241 1426 aa17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 CEBPAP49715 358 aaPredicted RBP17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 CCT4P50991 539 aaKnown RBP17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 MTHFSDQ2M296 383 aaKnown RBP17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 TTC22Q5TAA0 569 aa17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
AP003555.1-202ENST00000511013 ANKARQ7Z5J8 1434 aa17.65■□□□□ 0.42
AP003555.1-202ENST00000511013 IGSF1Q8N6C5 1336 aa17.65■□□□□ 0.42
AP003555.1-202ENST00000511013 SOX12O15370 315 aa17.65■□□□□ 0.42
AP003555.1-202ENST00000511013 KIF2CQ99661 725 aa17.65■□□□□ 0.42
AP003555.1-202ENST00000511013 PTMSP20962 102 aa17.64■□□□□ 0.41
AP003555.1-202ENST00000511013 RGPD8O14715 1765 aaPredicted RBP17.64■□□□□ 0.41
AP003555.1-202ENST00000511013 MSH6P52701 1360 aa17.64■□□□□ 0.41
AP003555.1-202ENST00000511013 GSPT1P15170 499 aaKnown RBP17.63■□□□□ 0.41
AP003555.1-202ENST00000511013 CASC1Q6TDU7 716 aa17.63■□□□□ 0.41
AP003555.1-202ENST00000511013 EYA1Q99502 592 aa17.63■□□□□ 0.41
AP003555.1-202ENST00000511013 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
AP003555.1-202ENST00000511013 K7ELQ4 463 aaPredicted RBP17.63■□□□□ 0.41
AP003555.1-202ENST00000511013 TRAK2O60296 914 aa17.63■□□□□ 0.41
AP003555.1-202ENST00000511013 CACNA1FO60840 1977 aa17.62■□□□□ 0.41
AP003555.1-202ENST00000511013 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
AP003555.1-202ENST00000511013 STK31Q9BXU1 1019 aa17.62■□□□□ 0.41
AP003555.1-202ENST00000511013 GBP4Q96PP9 640 aa17.61■□□□□ 0.41
AP003555.1-202ENST00000511013 MEIS3Q99687 375 aa17.61■□□□□ 0.41
AP003555.1-202ENST00000511013 PIK3C2AO00443 1686 aa17.61■□□□□ 0.41
AP003555.1-202ENST00000511013 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
AP003555.1-202ENST00000511013 FOXO3O43524 673 aa17.61■□□□□ 0.41
AP003555.1-202ENST00000511013 NLRP6P59044 892 aa17.61■□□□□ 0.41
AP003555.1-202ENST00000511013 RABEP1Q15276 862 aa17.61■□□□□ 0.41
AP003555.1-202ENST00000511013 BABAM1Q9NWV8 329 aa17.61■□□□□ 0.41
AP003555.1-202ENST00000511013 FER1L4A9Z1Z3 1794 aa17.6■□□□□ 0.41
AP003555.1-202ENST00000511013 USP54Q70EL1 1684 aa17.6■□□□□ 0.41
AP003555.1-202ENST00000511013 GOLGA6L3A6NEY3 463 aa17.59■□□□□ 0.41
AP003555.1-202ENST00000511013 GNAT3A8MTJ3 354 aa17.59■□□□□ 0.41
AP003555.1-202ENST00000511013 CCDC30Q5VVM6 783 aa17.59■□□□□ 0.41
AP003555.1-202ENST00000511013 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
AP003555.1-202ENST00000511013 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
AP003555.1-202ENST00000511013 RAB3GAP1Q15042 981 aa17.58■□□□□ 0.41
AP003555.1-202ENST00000511013 CEP170BQ9Y4F5 1589 aaPredicted RBP17.58■□□□□ 0.4
AP003555.1-202ENST00000511013 GNAI2P04899 355 aa17.58■□□□□ 0.4
AP003555.1-202ENST00000511013 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.4
AP003555.1-202ENST00000511013 RTN4Q9NQC3 1192 aaKnown RBP17.58■□□□□ 0.4
AP003555.1-202ENST00000511013 LRRC37A3O60309 1634 aa17.57■□□□□ 0.4
AP003555.1-202ENST00000511013 FSD2A1L4K1 749 aa17.57■□□□□ 0.4
AP003555.1-202ENST00000511013 GNAI3P08754 354 aa17.57■□□□□ 0.4
AP003555.1-202ENST00000511013 SLC4A10Q6U841 1118 aa17.57■□□□□ 0.4
AP003555.1-202ENST00000511013 TNPO1Q92973 898 aaKnown RBP17.57■□□□□ 0.4
AP003555.1-202ENST00000511013 USP26Q9BXU7 913 aa17.57■□□□□ 0.4
AP003555.1-202ENST00000511013 ISY1Q9ULR0 285 aaKnown RBP17.57■□□□□ 0.4
AP003555.1-202ENST00000511013 SDSP20132 328 aa17.56■□□□□ 0.4
AP003555.1-202ENST00000511013 HOXC9P31274 260 aa17.56■□□□□ 0.4
AP003555.1-202ENST00000511013 G2E3Q7L622 706 aa17.56■□□□□ 0.4
AP003555.1-202ENST00000511013 OSBPL3Q9H4L5 887 aa17.56■□□□□ 0.4
AP003555.1-202ENST00000511013 REC8O95072 547 aa17.56■□□□□ 0.4
AP003555.1-202ENST00000511013 FAM43AQ8N2R8 423 aa17.55■□□□□ 0.4
AP003555.1-202ENST00000511013 MAP3K5Q99683 1374 aa17.54■□□□□ 0.4
AP003555.1-202ENST00000511013 SMARCA5O60264 1052 aaPredicted RBP17.54■□□□□ 0.4
AP003555.1-202ENST00000511013 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
AP003555.1-202ENST00000511013 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
AP003555.1-202ENST00000511013 F6X3S4 739 aa17.53■□□□□ 0.4
AP003555.1-202ENST00000511013 CD2BP2O95400 341 aaKnown RBP17.53■□□□□ 0.4
AP003555.1-202ENST00000511013 FLIIQ13045 1269 aa17.53■□□□□ 0.4
AP003555.1-202ENST00000511013 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
AP003555.1-202ENST00000511013 APBB1O00213 710 aa17.53■□□□□ 0.4
AP003555.1-202ENST00000511013 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
AP003555.1-202ENST00000511013 CHMP4AQ9BY43 222 aa17.53■□□□□ 0.4
AP003555.1-202ENST00000511013 GZF1Q9H116 711 aaPredicted RBP17.53■□□□□ 0.4
AP003555.1-202ENST00000511013 MARF1Q9Y4F3 1742 aaKnown RBP17.53■□□□□ 0.4
AP003555.1-202ENST00000511013 FAM208AQ9UK61 1670 aaKnown RBP17.52■□□□□ 0.4
AP003555.1-202ENST00000511013 GOLGA6L22H0YM25 854 aa17.52■□□□□ 0.4
AP003555.1-202ENST00000511013 KCNA6P17658 529 aa17.52■□□□□ 0.4
AP003555.1-202ENST00000511013 CLEC17AQ6ZS10 378 aa17.52■□□□□ 0.4
AP003555.1-202ENST00000511013 ERC2O15083 957 aa17.51■□□□□ 0.39
AP003555.1-202ENST00000511013 MRE11P49959 708 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms