RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 MAP3K19Q56UN5 1328 aa22.32■■□□□ 1.16
CCHCR1-228ENST00000509552 ANKRD44Q8N8A2 993 aa22.32■■□□□ 1.16
CCHCR1-228ENST00000509552 NGDNQ8NEJ9 315 aaKnown RBP22.32■■□□□ 1.16
CCHCR1-228ENST00000509552 SBNO1A3KN83 1393 aa22.31■■□□□ 1.16
CCHCR1-228ENST00000509552 FLT4P35916 1363 aa22.31■■□□□ 1.16
CCHCR1-228ENST00000509552 CRB1P82279 1406 aa22.31■■□□□ 1.16
CCHCR1-228ENST00000509552 RGS12O14924 1447 aa22.31■■□□□ 1.16
CCHCR1-228ENST00000509552 NCOA3Q9Y6Q9 1424 aa22.3■■□□□ 1.16
CCHCR1-228ENST00000509552 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
CCHCR1-228ENST00000509552 PLEKHM2Q8IWE5 1019 aa22.29■■□□□ 1.16
CCHCR1-228ENST00000509552 SLIT1O75093 1534 aa22.29■■□□□ 1.16
CCHCR1-228ENST00000509552 AMPHP49418 695 aa22.29■■□□□ 1.16
CCHCR1-228ENST00000509552 SLC4A2P04920 1241 aa22.28■■□□□ 1.16
CCHCR1-228ENST00000509552 MTHFSDQ2M296 383 aaKnown RBP22.28■■□□□ 1.16
CCHCR1-228ENST00000509552 L1TD1Q5T7N2 865 aaKnown RBP22.28■■□□□ 1.16
CCHCR1-228ENST00000509552 RTN4Q9NQC3 1192 aaKnown RBP22.28■■□□□ 1.16
CCHCR1-228ENST00000509552 CEP85Q6P2H3 762 aa22.28■■□□□ 1.16
CCHCR1-228ENST00000509552 TSPYL4Q9UJ04 414 aa22.28■■□□□ 1.16
CCHCR1-228ENST00000509552 ARHGAP23Q9P227 1491 aa22.27■■□□□ 1.16
CCHCR1-228ENST00000509552 MSH6P52701 1360 aa22.27■■□□□ 1.16
CCHCR1-228ENST00000509552 ATP10DQ9P241 1426 aa22.27■■□□□ 1.16
CCHCR1-228ENST00000509552 GAS2L2Q8NHY3 880 aa22.27■■□□□ 1.16
CCHCR1-228ENST00000509552 FMN2Q9NZ56 1722 aa22.27■■□□□ 1.16
CCHCR1-228ENST00000509552 KIF2CQ99661 725 aa22.26■■□□□ 1.15
CCHCR1-228ENST00000509552 GSPT1P15170 499 aaKnown RBP22.26■■□□□ 1.15
CCHCR1-228ENST00000509552 RTL1A6NKG5 1358 aa22.26■■□□□ 1.15
CCHCR1-228ENST00000509552 KDRP35968 1356 aa22.26■■□□□ 1.15
CCHCR1-228ENST00000509552 TTC22Q5TAA0 569 aa22.25■■□□□ 1.15
CCHCR1-228ENST00000509552 CIZ1Q9ULV3 898 aaPredicted RBP22.25■■□□□ 1.15
CCHCR1-228ENST00000509552 DIP2AQ14689 1571 aa22.25■■□□□ 1.15
CCHCR1-228ENST00000509552 FOXO3O43524 673 aa22.25■■□□□ 1.15
CCHCR1-228ENST00000509552 DDIT3P35638 169 aa22.25■■□□□ 1.15
CCHCR1-228ENST00000509552 THEMISQ8N1K5 641 aaPredicted RBP22.25■■□□□ 1.15
CCHCR1-228ENST00000509552 MIS18AQ9NYP9 233 aa22.25■■□□□ 1.15
CCHCR1-228ENST00000509552 DDX11L8A8MPP1 907 aa22.24■■□□□ 1.15
CCHCR1-228ENST00000509552 HSP90AA1P07900 732 aaKnown RBP22.24■■□□□ 1.15
CCHCR1-228ENST00000509552 EYA1Q99502 592 aa22.24■■□□□ 1.15
CCHCR1-228ENST00000509552 IGSF1Q8N6C5 1336 aa22.24■■□□□ 1.15
CCHCR1-228ENST00000509552 MEIS3Q99687 375 aa22.23■■□□□ 1.15
CCHCR1-228ENST00000509552 HMMRO75330 724 aa22.23■■□□□ 1.15
CCHCR1-228ENST00000509552 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
CCHCR1-228ENST00000509552 CCT4P50991 539 aaKnown RBP22.22■■□□□ 1.15
CCHCR1-228ENST00000509552 K7ELQ4 463 aaPredicted RBP22.22■■□□□ 1.15
CCHCR1-228ENST00000509552 HTATSF1O43719 755 aaKnown RBP22.22■■□□□ 1.15
CCHCR1-228ENST00000509552 TRAK2O60296 914 aa22.21■■□□□ 1.15
CCHCR1-228ENST00000509552 NLRP6P59044 892 aa22.21■■□□□ 1.15
CCHCR1-228ENST00000509552 C16orf71Q8IYS4 520 aaPredicted RBP22.21■■□□□ 1.15
CCHCR1-228ENST00000509552 CASC1Q6TDU7 716 aa22.2■■□□□ 1.14
CCHCR1-228ENST00000509552 SLC4A10Q6U841 1118 aa22.2■■□□□ 1.14
CCHCR1-228ENST00000509552 STK31Q9BXU1 1019 aa22.2■■□□□ 1.14
CCHCR1-228ENST00000509552 ANKARQ7Z5J8 1434 aa22.19■■□□□ 1.14
CCHCR1-228ENST00000509552 RGPD8O14715 1765 aaPredicted RBP22.19■■□□□ 1.14
CCHCR1-228ENST00000509552 PIK3C2AO00443 1686 aa22.19■■□□□ 1.14
CCHCR1-228ENST00000509552 RIMS1Q86UR5 1692 aaKnown RBP22.19■■□□□ 1.14
CCHCR1-228ENST00000509552 CEP170BQ9Y4F5 1589 aaPredicted RBP22.18■■□□□ 1.14
CCHCR1-228ENST00000509552 GOLGA6L3A6NEY3 463 aa22.18■■□□□ 1.14
CCHCR1-228ENST00000509552 GBP4Q96PP9 640 aa22.18■■□□□ 1.14
CCHCR1-228ENST00000509552 APBB1O00213 710 aa22.17■■□□□ 1.14
CCHCR1-228ENST00000509552 G2E3Q7L622 706 aa22.17■■□□□ 1.14
CCHCR1-228ENST00000509552 GNAT3A8MTJ3 354 aa22.17■■□□□ 1.14
CCHCR1-228ENST00000509552 RBM42Q9BTD8 480 aaKnown RBP22.17■■□□□ 1.14
CCHCR1-228ENST00000509552 SMARCA5O60264 1052 aaPredicted RBP22.16■■□□□ 1.14
CCHCR1-228ENST00000509552 CD2BP2O95400 341 aaKnown RBP22.16■■□□□ 1.14
CCHCR1-228ENST00000509552 RABEP1Q15276 862 aa22.16■■□□□ 1.14
CCHCR1-228ENST00000509552 OTUD7AQ8TE49 926 aaPredicted RBP22.16■■□□□ 1.14
CCHCR1-228ENST00000509552 TNPO1Q92973 898 aaKnown RBP22.16■■□□□ 1.14
CCHCR1-228ENST00000509552 GZF1Q9H116 711 aaPredicted RBP22.16■■□□□ 1.14
CCHCR1-228ENST00000509552 F6X3S4 739 aa22.15■■□□□ 1.14
CCHCR1-228ENST00000509552 RAB3GAP1Q15042 981 aa22.15■■□□□ 1.14
CCHCR1-228ENST00000509552 HOXC9P31274 260 aa22.15■■□□□ 1.14
CCHCR1-228ENST00000509552 CCDC30Q5VVM6 783 aa22.15■■□□□ 1.14
CCHCR1-228ENST00000509552 GNAI2P04899 355 aa22.14■■□□□ 1.14
CCHCR1-228ENST00000509552 SDSP20132 328 aa22.14■■□□□ 1.14
CCHCR1-228ENST00000509552 XRN1Q8IZH2 1706 aaKnown RBP22.14■■□□□ 1.14
CCHCR1-228ENST00000509552 PTMSP20962 102 aa22.14■■□□□ 1.13
CCHCR1-228ENST00000509552 USP26Q9BXU7 913 aa22.13■■□□□ 1.13
CCHCR1-228ENST00000509552 FER1L4A9Z1Z3 1794 aa22.13■■□□□ 1.13
CCHCR1-228ENST00000509552 SOS1Q07889 1333 aaPredicted RBP22.13■■□□□ 1.13
CCHCR1-228ENST00000509552 KCNA6P17658 529 aa22.12■■□□□ 1.13
CCHCR1-228ENST00000509552 NUTM2GQ5VZR2 741 aa22.12■■□□□ 1.13
CCHCR1-228ENST00000509552 ABTB2Q8N961 1025 aa22.12■■□□□ 1.13
CCHCR1-228ENST00000509552 FOXD4L1Q9NU39 408 aa22.12■■□□□ 1.13
CCHCR1-228ENST00000509552 FSD2A1L4K1 749 aa22.12■■□□□ 1.13
CCHCR1-228ENST00000509552 GNAI3P08754 354 aa22.11■■□□□ 1.13
CCHCR1-228ENST00000509552 FLIIQ13045 1269 aa22.11■■□□□ 1.13
CCHCR1-228ENST00000509552 FKBP5Q13451 457 aaPredicted RBP22.11■■□□□ 1.13
CCHCR1-228ENST00000509552 BABAM1Q9NWV8 329 aa22.11■■□□□ 1.13
CCHCR1-228ENST00000509552 MAP3K5Q99683 1374 aa22.1■■□□□ 1.13
CCHCR1-228ENST00000509552 LRRC37A3O60309 1634 aa22.1■■□□□ 1.13
CCHCR1-228ENST00000509552 REC8O95072 547 aa22.1■■□□□ 1.13
CCHCR1-228ENST00000509552 OSBPL3Q9H4L5 887 aa22.09■■□□□ 1.13
CCHCR1-228ENST00000509552 SKOR2Q2VWA4 1001 aaPredicted RBP22.09■■□□□ 1.13
CCHCR1-228ENST00000509552 TAF7Q15545 349 aaPredicted RBP22.08■■□□□ 1.13
CCHCR1-228ENST00000509552 FAM43AQ8N2R8 423 aa22.08■■□□□ 1.13
CCHCR1-228ENST00000509552 LTV1Q96GA3 475 aaPredicted RBP22.08■■□□□ 1.12
CCHCR1-228ENST00000509552 ARXQ96QS3 562 aa22.08■■□□□ 1.12
CCHCR1-228ENST00000509552 XRCC6P12956 609 aaKnown RBP eCLIP22.07■■□□□ 1.12
CCHCR1-228ENST00000509552 PDE1AP54750 535 aa22.07■■□□□ 1.12
CCHCR1-228ENST00000509552 C14orf37Q86TY3 774 aa22.07■■□□□ 1.12
CCHCR1-228ENST00000509552 IL17REQ8NFR9 667 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms