RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 DEFB132Q7Z7B7 95 aa16.81■□□□□ 0.28
PTPN20-218ENST00000508357 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
PTPN20-218ENST00000508357 EXOC5O00471 708 aa16.8■□□□□ 0.28
PTPN20-218ENST00000508357 TRIM37O94972 964 aa16.8■□□□□ 0.28
PTPN20-218ENST00000508357 RREB1Q92766 1687 aa16.8■□□□□ 0.28
PTPN20-218ENST00000508357 IL13P35225 146 aa16.79■□□□□ 0.28
PTPN20-218ENST00000508357 DDX10Q13206 875 aaKnown RBP16.79■□□□□ 0.28
PTPN20-218ENST00000508357 CCDC125Q86Z20 511 aa16.78■□□□□ 0.28
PTPN20-218ENST00000508357 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
PTPN20-218ENST00000508357 RGPD3A6NKT7 1758 aaPredicted RBP16.78■□□□□ 0.28
PTPN20-218ENST00000508357 RGPD4Q7Z3J3 1758 aa16.78■□□□□ 0.28
PTPN20-218ENST00000508357 KDRP35968 1356 aa16.77■□□□□ 0.28
PTPN20-218ENST00000508357 BTAF1O14981 1849 aa16.76■□□□□ 0.27
PTPN20-218ENST00000508357 TATP17735 454 aaPredicted RBP16.76■□□□□ 0.27
PTPN20-218ENST00000508357 PPP2R1AP30153 589 aa16.76■□□□□ 0.27
PTPN20-218ENST00000508357 ZCRB1Q8TBF4 217 aaKnown RBP16.76■□□□□ 0.27
PTPN20-218ENST00000508357 RAPGEF4Q8WZA2 1011 aa16.76■□□□□ 0.27
PTPN20-218ENST00000508357 NUP188Q5SRE5 1749 aa16.76■□□□□ 0.27
PTPN20-218ENST00000508357 CYP27B1O15528 508 aa16.74■□□□□ 0.27
PTPN20-218ENST00000508357 KCNQ2O43526 872 aa16.74■□□□□ 0.27
PTPN20-218ENST00000508357 DDX54Q8TDD1 881 aaKnown RBP16.74■□□□□ 0.27
PTPN20-218ENST00000508357 PLEKHG2Q9H7P9 1386 aa16.74■□□□□ 0.27
PTPN20-218ENST00000508357 EN1Q05925 392 aaPredicted RBP16.73■□□□□ 0.27
PTPN20-218ENST00000508357 ACSBG1Q96GR2 724 aa16.73■□□□□ 0.27
PTPN20-218ENST00000508357 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
PTPN20-218ENST00000508357 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
PTPN20-218ENST00000508357 SF3B2Q13435 895 aaKnown RBP16.72■□□□□ 0.27
PTPN20-218ENST00000508357 CAMKK2Q96RR4 588 aa16.72■□□□□ 0.27
PTPN20-218ENST00000508357 APBA3O96018 575 aa16.71■□□□□ 0.27
PTPN20-218ENST00000508357 BAG6P46379 1132 aa16.71■□□□□ 0.27
PTPN20-218ENST00000508357 EZH2Q15910 746 aaKnown RBP16.71■□□□□ 0.27
PTPN20-218ENST00000508357 BCL11BQ9C0K0 894 aaPredicted RBP16.71■□□□□ 0.27
PTPN20-218ENST00000508357 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
PTPN20-218ENST00000508357 SULT6B1Q6IMI4 303 aa16.7■□□□□ 0.26
PTPN20-218ENST00000508357 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
PTPN20-218ENST00000508357 ITGB4P16144 1822 aa16.68■□□□□ 0.26
PTPN20-218ENST00000508357 PAPPAQ13219 1627 aa16.68■□□□□ 0.26
PTPN20-218ENST00000508357 HMOX1P09601 288 aa16.68■□□□□ 0.26
PTPN20-218ENST00000508357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTPN20-218ENST00000508357 KDM6AO15550 1401 aaPredicted RBP16.68■□□□□ 0.26
PTPN20-218ENST00000508357 PHKG2P15735 406 aa16.67■□□□□ 0.26
PTPN20-218ENST00000508357 NKX1-1Q15270 411 aaPredicted RBP16.66■□□□□ 0.26
PTPN20-218ENST00000508357 SPG7Q9UQ90 795 aa16.66■□□□□ 0.26
PTPN20-218ENST00000508357 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
PTPN20-218ENST00000508357 LY75O60449 1722 aa16.65■□□□□ 0.26
PTPN20-218ENST00000508357 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
PTPN20-218ENST00000508357 RALBP1Q15311 655 aa16.64■□□□□ 0.25
PTPN20-218ENST00000508357 PROM2Q8N271 834 aa16.64■□□□□ 0.25
PTPN20-218ENST00000508357 U2SURPO15042 1029 aaKnown RBP16.63■□□□□ 0.25
PTPN20-218ENST00000508357 PLSCR1O15162 318 aa16.63■□□□□ 0.25
PTPN20-218ENST00000508357 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
PTPN20-218ENST00000508357 SCN11AQ9UI33 1791 aa16.62■□□□□ 0.25
PTPN20-218ENST00000508357 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
PTPN20-218ENST00000508357 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
PTPN20-218ENST00000508357 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
PTPN20-218ENST00000508357 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
PTPN20-218ENST00000508357 MRC1P22897 1456 aa16.61■□□□□ 0.25
PTPN20-218ENST00000508357 PLEKHO1Q53GL0 409 aaPredicted RBP16.61■□□□□ 0.25
PTPN20-218ENST00000508357 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
PTPN20-218ENST00000508357 SYTL4Q96C24 671 aaPredicted RBP16.61■□□□□ 0.25
PTPN20-218ENST00000508357 PRKRIP1Q9H875 184 aaPredicted RBP16.61■□□□□ 0.25
PTPN20-218ENST00000508357 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
PTPN20-218ENST00000508357 VIRMAQ69YN4 1812 aaKnown RBP16.61■□□□□ 0.25
PTPN20-218ENST00000508357 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
PTPN20-218ENST00000508357 TXNRD1Q16881 649 aa16.59■□□□□ 0.25
PTPN20-218ENST00000508357 MTHFSDQ2M296 383 aaKnown RBP16.59■□□□□ 0.25
PTPN20-218ENST00000508357 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
PTPN20-218ENST00000508357 PIGBQ92521 554 aa16.58■□□□□ 0.24
PTPN20-218ENST00000508357 LRRC4BQ9NT99 713 aa16.58■□□□□ 0.24
PTPN20-218ENST00000508357 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
PTPN20-218ENST00000508357 TUBGCP6Q96RT7 1819 aa16.56■□□□□ 0.24
PTPN20-218ENST00000508357 CASZ1Q86V15 1759 aa16.56■□□□□ 0.24
PTPN20-218ENST00000508357 PALLDQ8WX93 1383 aa16.56■□□□□ 0.24
PTPN20-218ENST00000508357 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
PTPN20-218ENST00000508357 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
PTPN20-218ENST00000508357 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
PTPN20-218ENST00000508357 MPRIPQ6WCQ1 1025 aa16.56■□□□□ 0.24
PTPN20-218ENST00000508357 C5P01031 1676 aa16.56■□□□□ 0.24
PTPN20-218ENST00000508357 AKAP4Q5JQC9 854 aa16.55■□□□□ 0.24
PTPN20-218ENST00000508357 DCAF5Q96JK2 942 aa16.55■□□□□ 0.24
PTPN20-218ENST00000508357 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
PTPN20-218ENST00000508357 SIPA1L3O60292 1781 aaPredicted RBP16.55■□□□□ 0.24
PTPN20-218ENST00000508357 TAF1LQ8IZX4 1826 aa16.54■□□□□ 0.24
PTPN20-218ENST00000508357 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
PTPN20-218ENST00000508357 HSP90AB1P08238 724 aaKnown RBP16.54■□□□□ 0.24
PTPN20-218ENST00000508357 KCNQ4P56696 695 aa16.54■□□□□ 0.24
PTPN20-218ENST00000508357 R3HDM1Q15032 1099 aaKnown RBP16.54■□□□□ 0.24
PTPN20-218ENST00000508357 C1orf141Q5JVX7 400 aa16.54■□□□□ 0.24
PTPN20-218ENST00000508357 ZNF827Q17R98 1081 aa16.53■□□□□ 0.24
PTPN20-218ENST00000508357 TMOD3Q9NYL9 352 aa16.53■□□□□ 0.24
PTPN20-218ENST00000508357 SRCAPQ6ZRS2 3230 aa16.53■□□□□ 0.24
PTPN20-218ENST00000508357 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
PTPN20-218ENST00000508357 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
PTPN20-218ENST00000508357 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.24
PTPN20-218ENST00000508357 LGR6Q9HBX8 967 aa16.52■□□□□ 0.24
PTPN20-218ENST00000508357 ASAP1Q9ULH1 1129 aa16.52■□□□□ 0.24
PTPN20-218ENST00000508357 CICQ96RK0 1608 aaPredicted RBP16.52■□□□□ 0.23
PTPN20-218ENST00000508357 QSER1Q2KHR3 1735 aa16.51■□□□□ 0.23
PTPN20-218ENST00000508357 ZNF831Q5JPB2 1677 aa16.51■□□□□ 0.23
PTPN20-218ENST00000508357 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms