RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 RBSNQ9H1K0 784 aa16.54■□□□□ 0.24
SNCAIP-209ENST00000508017 RBM27Q9P2N5 1060 aaKnown RBP16.54■□□□□ 0.24
SNCAIP-209ENST00000508017 ZDHHC9Q9Y397 364 aa16.53■□□□□ 0.24
SNCAIP-209ENST00000508017 NCKAP5LQ9HCH0 1330 aa16.53■□□□□ 0.24
SNCAIP-209ENST00000508017 MSH6P52701 1360 aa16.53■□□□□ 0.24
SNCAIP-209ENST00000508017 NEO1Q92859 1461 aa16.53■□□□□ 0.24
SNCAIP-209ENST00000508017 EDC4Q6P2E9 1401 aaKnown RBP16.52■□□□□ 0.24
SNCAIP-209ENST00000508017 PRPF40AO75400 957 aaKnown RBP16.52■□□□□ 0.24
SNCAIP-209ENST00000508017 GLIPR1L2Q4G1C9 344 aa16.52■□□□□ 0.24
SNCAIP-209ENST00000508017 GPT2Q8TD30 523 aa16.52■□□□□ 0.24
SNCAIP-209ENST00000508017 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
SNCAIP-209ENST00000508017 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.23
SNCAIP-209ENST00000508017 TPM2P07951 284 aa16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 AEBP1Q8IUX7 1158 aa16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 CPS1P31327 1500 aa16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 PRIM1P49642 420 aaKnown RBP16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 MEIS3Q99687 375 aa16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 RTL1A6NKG5 1358 aa16.51■□□□□ 0.23
SNCAIP-209ENST00000508017 MSNP26038 577 aaKnown RBP16.5■□□□□ 0.23
SNCAIP-209ENST00000508017 RPAP2Q8IXW5 612 aaPredicted RBP16.5■□□□□ 0.23
SNCAIP-209ENST00000508017 ST18O60284 1047 aa16.49■□□□□ 0.23
SNCAIP-209ENST00000508017 DLC1Q96QB1 1528 aa16.49■□□□□ 0.23
SNCAIP-209ENST00000508017 AATKQ6ZMQ8 1374 aa16.49■□□□□ 0.23
SNCAIP-209ENST00000508017 OFD1O75665 1012 aa16.49■□□□□ 0.23
SNCAIP-209ENST00000508017 FOXD4L5Q5VV16 416 aaPredicted RBP16.49■□□□□ 0.23
SNCAIP-209ENST00000508017 FOXD4L4Q8WXT5 416 aaPredicted RBP16.49■□□□□ 0.23
SNCAIP-209ENST00000508017 CWC22Q9HCG8 908 aaKnown RBP16.49■□□□□ 0.23
SNCAIP-209ENST00000508017 NSFL1CQ9UNZ2 370 aaKnown RBP16.49■□□□□ 0.23
SNCAIP-209ENST00000508017 SETD1AO15047 1707 aaKnown RBP16.49■□□□□ 0.23
SNCAIP-209ENST00000508017 COG3Q96JB2 828 aa16.48■□□□□ 0.23
SNCAIP-209ENST00000508017 CASC1Q6TDU7 716 aa16.48■□□□□ 0.23
SNCAIP-209ENST00000508017 MCM10Q7L590 875 aa16.48■□□□□ 0.23
SNCAIP-209ENST00000508017 WASLO00401 505 aaPredicted RBP16.47■□□□□ 0.23
SNCAIP-209ENST00000508017 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.47■□□□□ 0.23
SNCAIP-209ENST00000508017 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
SNCAIP-209ENST00000508017 PDLIM2Q96JY6 352 aa16.46■□□□□ 0.23
SNCAIP-209ENST00000508017 ERC2O15083 957 aa16.46■□□□□ 0.23
SNCAIP-209ENST00000508017 REC8O95072 547 aa16.46■□□□□ 0.23
SNCAIP-209ENST00000508017 SULT6B1Q6IMI4 303 aa16.46■□□□□ 0.23
SNCAIP-209ENST00000508017 MON2Q7Z3U7 1717 aa16.45■□□□□ 0.22
SNCAIP-209ENST00000508017 CHL1O00533 1208 aa16.45■□□□□ 0.22
SNCAIP-209ENST00000508017 TSHZ3Q63HK5 1081 aa16.45■□□□□ 0.22
SNCAIP-209ENST00000508017 SYCE3A1L190 88 aa16.45■□□□□ 0.22
SNCAIP-209ENST00000508017 NUDT16Q96DE0 195 aaKnown RBP16.45■□□□□ 0.22
SNCAIP-209ENST00000508017 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
SNCAIP-209ENST00000508017 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.44■□□□□ 0.22
SNCAIP-209ENST00000508017 ZMYND15Q9H091 742 aa16.44■□□□□ 0.22
SNCAIP-209ENST00000508017 NOL7Q9UMY1 257 aaKnown RBP16.44■□□□□ 0.22
SNCAIP-209ENST00000508017 NEK4P51957 841 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 XPCQ01831 940 aaPredicted RBP16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 MIS18AQ9NYP9 233 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 A2ML1A8K2U0 1454 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 C3P01024 1663 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 PTPRCP08575 1304 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 F6X3S4 739 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 PDE1AP54750 535 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 LRSAM1Q6UWE0 723 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 G2E3Q7L622 706 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 TMX3Q96JJ7 454 aa16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 R3HCC1Q9Y3T6 440 aaKnown RBP16.43■□□□□ 0.22
SNCAIP-209ENST00000508017 NRKQ7Z2Y5 1582 aa16.42■□□□□ 0.22
SNCAIP-209ENST00000508017 HS1BP3Q53T59 392 aa16.42■□□□□ 0.22
SNCAIP-209ENST00000508017 SLC4A10Q6U841 1118 aa16.41■□□□□ 0.22
SNCAIP-209ENST00000508017 KIAA0232Q92628 1395 aa16.41■□□□□ 0.22
SNCAIP-209ENST00000508017 AKAP12Q02952 1782 aa16.41■□□□□ 0.22
SNCAIP-209ENST00000508017 RBM10P98175 930 aaKnown RBP16.41■□□□□ 0.22
SNCAIP-209ENST00000508017 NOL8Q76FK4 1167 aaKnown RBP16.41■□□□□ 0.22
SNCAIP-209ENST00000508017 METP08581 1390 aa16.41■□□□□ 0.22
SNCAIP-209ENST00000508017 RNF214Q8ND24 703 aa16.4■□□□□ 0.22
SNCAIP-209ENST00000508017 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNCAIP-209ENST00000508017 PALD1Q9ULE6 856 aa16.4■□□□□ 0.22
SNCAIP-209ENST00000508017 EXOC6BQ9Y2D4 811 aa16.4■□□□□ 0.22
SNCAIP-209ENST00000508017 ITSN1Q15811 1721 aa16.4■□□□□ 0.22
SNCAIP-209ENST00000508017 ZNF500O60304 480 aaPredicted RBP16.4■□□□□ 0.22
SNCAIP-209ENST00000508017 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
SNCAIP-209ENST00000508017 NRXN3Q9Y4C0 1643 aa16.39■□□□□ 0.21
SNCAIP-209ENST00000508017 PKNOX2Q96KN3 472 aa16.39■□□□□ 0.21
SNCAIP-209ENST00000508017 PDCL3Q9H2J4 239 aa16.39■□□□□ 0.21
SNCAIP-209ENST00000508017 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
SNCAIP-209ENST00000508017 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
SNCAIP-209ENST00000508017 HAP1P54257 671 aaPredicted RBP16.39■□□□□ 0.21
SNCAIP-209ENST00000508017 HMMRO75330 724 aa16.38■□□□□ 0.21
SNCAIP-209ENST00000508017 ZKSCAN5Q9Y2L8 839 aa16.38■□□□□ 0.21
SNCAIP-209ENST00000508017 PRR36Q9H6K5 1346 aa16.38■□□□□ 0.21
SNCAIP-209ENST00000508017 CRB1P82279 1406 aa16.38■□□□□ 0.21
SNCAIP-209ENST00000508017 ESYT1Q9BSJ8 1104 aa16.38■□□□□ 0.21
SNCAIP-209ENST00000508017 FOXO3O43524 673 aa16.37■□□□□ 0.21
SNCAIP-209ENST00000508017 BRD1O95696 1058 aa16.37■□□□□ 0.21
SNCAIP-209ENST00000508017 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
SNCAIP-209ENST00000508017 FOXD4L6Q3SYB3 417 aaPredicted RBP16.37■□□□□ 0.21
SNCAIP-209ENST00000508017 FOXD4L3Q6VB84 417 aaPredicted RBP16.37■□□□□ 0.21
SNCAIP-209ENST00000508017 SALL3Q9BXA9 1300 aa16.37■□□□□ 0.21
SNCAIP-209ENST00000508017 RIMS1Q86UR5 1692 aaKnown RBP16.36■□□□□ 0.21
SNCAIP-209ENST00000508017 PEAK1Q9H792 1746 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms