RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 USP31Q70CQ4 1352 aa16.23■□□□□ 0.19
SPDL1-206ENST00000507232 SSH2Q76I76 1423 aa16.23■□□□□ 0.19
SPDL1-206ENST00000507232 DIP2AQ14689 1571 aa16.23■□□□□ 0.19
SPDL1-206ENST00000507232 F6X3S4 739 aa16.23■□□□□ 0.19
SPDL1-206ENST00000507232 SMARCA5O60264 1052 aaPredicted RBP16.23■□□□□ 0.19
SPDL1-206ENST00000507232 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
SPDL1-206ENST00000507232 BRPF3Q9ULD4 1205 aa16.23■□□□□ 0.19
SPDL1-206ENST00000507232 TBX22Q9Y458 520 aa16.23■□□□□ 0.19
SPDL1-206ENST00000507232 MSH6P52701 1360 aa16.23■□□□□ 0.19
SPDL1-206ENST00000507232 NALCNQ8IZF0 1738 aa16.23■□□□□ 0.19
SPDL1-206ENST00000507232 CHMP4BQ9H444 224 aaKnown RBP16.22■□□□□ 0.19
SPDL1-206ENST00000507232 CEP170BQ9Y4F5 1589 aaPredicted RBP16.22■□□□□ 0.19
SPDL1-206ENST00000507232 ZBTB7CA1YPR0 619 aa16.22■□□□□ 0.19
SPDL1-206ENST00000507232 CRB1P82279 1406 aa16.22■□□□□ 0.19
SPDL1-206ENST00000507232 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
SPDL1-206ENST00000507232 OTUD7AQ8TE49 926 aaPredicted RBP16.22■□□□□ 0.19
SPDL1-206ENST00000507232 MEIS3Q99687 375 aa16.22■□□□□ 0.19
SPDL1-206ENST00000507232 RGPD1P0DJD0 1748 aa16.21■□□□□ 0.19
SPDL1-206ENST00000507232 RGS12O14924 1447 aa16.21■□□□□ 0.19
SPDL1-206ENST00000507232 BMP2KLQ5H9B9 411 aa16.21■□□□□ 0.19
SPDL1-206ENST00000507232 TBC1D9Q6ZT07 1266 aa16.21■□□□□ 0.19
SPDL1-206ENST00000507232 THEMISQ8N1K5 641 aaPredicted RBP16.21■□□□□ 0.19
SPDL1-206ENST00000507232 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.18
SPDL1-206ENST00000507232 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.18
SPDL1-206ENST00000507232 FER1L4A9Z1Z3 1794 aa16.21■□□□□ 0.18
SPDL1-206ENST00000507232 FLT4P35916 1363 aa16.2■□□□□ 0.18
SPDL1-206ENST00000507232 TTC21AQ8NDW8 1320 aa16.2■□□□□ 0.18
SPDL1-206ENST00000507232 FMN2Q9NZ56 1722 aa16.2■□□□□ 0.18
SPDL1-206ENST00000507232 INTS3Q68E01 1043 aaKnown RBP16.2■□□□□ 0.18
SPDL1-206ENST00000507232 HSCBQ8IWL3 235 aa16.2■□□□□ 0.18
SPDL1-206ENST00000507232 ARXQ96QS3 562 aa16.2■□□□□ 0.18
SPDL1-206ENST00000507232 SBNO1A3KN83 1393 aa16.2■□□□□ 0.18
SPDL1-206ENST00000507232 GSPT1P15170 499 aaKnown RBP16.19■□□□□ 0.18
SPDL1-206ENST00000507232 ABTB2Q8N961 1025 aa16.19■□□□□ 0.18
SPDL1-206ENST00000507232 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
SPDL1-206ENST00000507232 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
SPDL1-206ENST00000507232 ARHGEF10O15013 1369 aa16.19■□□□□ 0.18
SPDL1-206ENST00000507232 SLIT1O75093 1534 aa16.19■□□□□ 0.18
SPDL1-206ENST00000507232 ARHGAP23Q9P227 1491 aa16.18■□□□□ 0.18
SPDL1-206ENST00000507232 CEP85Q6P2H3 762 aa16.18■□□□□ 0.18
SPDL1-206ENST00000507232 PLEKHM2Q8IWE5 1019 aa16.18■□□□□ 0.18
SPDL1-206ENST00000507232 HOXC9P31274 260 aa16.17■□□□□ 0.18
SPDL1-206ENST00000507232 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
SPDL1-206ENST00000507232 CD2BP2O95400 341 aaKnown RBP16.16■□□□□ 0.18
SPDL1-206ENST00000507232 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
SPDL1-206ENST00000507232 ATP10DQ9P241 1426 aa16.16■□□□□ 0.18
SPDL1-206ENST00000507232 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
SPDL1-206ENST00000507232 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
SPDL1-206ENST00000507232 KIAA0232Q92628 1395 aa16.16■□□□□ 0.18
SPDL1-206ENST00000507232 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
SPDL1-206ENST00000507232 KIF2CQ99661 725 aa16.15■□□□□ 0.18
SPDL1-206ENST00000507232 GZF1Q9H116 711 aaPredicted RBP16.15■□□□□ 0.18
SPDL1-206ENST00000507232 PTPRCP08575 1304 aa16.14■□□□□ 0.17
SPDL1-206ENST00000507232 HSP90AB1P08238 724 aaKnown RBP16.13■□□□□ 0.17
SPDL1-206ENST00000507232 GAS2L2Q8NHY3 880 aa16.13■□□□□ 0.17
SPDL1-206ENST00000507232 SETD1BQ9UPS6 1966 aaKnown RBP16.13■□□□□ 0.17
SPDL1-206ENST00000507232 CDC45O75419 566 aa16.13■□□□□ 0.17
SPDL1-206ENST00000507232 HAP1P54257 671 aaPredicted RBP16.12■□□□□ 0.17
SPDL1-206ENST00000507232 XPCQ01831 940 aaPredicted RBP16.12■□□□□ 0.17
SPDL1-206ENST00000507232 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
SPDL1-206ENST00000507232 CHMP5Q9NZZ3 219 aa16.12■□□□□ 0.17
SPDL1-206ENST00000507232 KDRP35968 1356 aa16.12■□□□□ 0.17
SPDL1-206ENST00000507232 KIF24Q5T7B8 1368 aa16.12■□□□□ 0.17
SPDL1-206ENST00000507232 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
SPDL1-206ENST00000507232 TSHZ3Q63HK5 1081 aa16.12■□□□□ 0.17
SPDL1-206ENST00000507232 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
SPDL1-206ENST00000507232 XRN1Q8IZH2 1706 aaKnown RBP16.11■□□□□ 0.17
SPDL1-206ENST00000507232 FKBP5Q13451 457 aaPredicted RBP16.11■□□□□ 0.17
SPDL1-206ENST00000507232 RPAP2Q8IXW5 612 aaPredicted RBP16.11■□□□□ 0.17
SPDL1-206ENST00000507232 MCM4P33991 863 aa16.1■□□□□ 0.17
SPDL1-206ENST00000507232 STK31Q9BXU1 1019 aa16.1■□□□□ 0.17
SPDL1-206ENST00000507232 EXOC6BQ9Y2D4 811 aa16.1■□□□□ 0.17
SPDL1-206ENST00000507232 PHF8Q9UPP1 1060 aa16.1■□□□□ 0.17
SPDL1-206ENST00000507232 MARF1Q9Y4F3 1742 aaKnown RBP16.09■□□□□ 0.17
SPDL1-206ENST00000507232 ESCO1Q5FWF5 840 aa16.09■□□□□ 0.17
SPDL1-206ENST00000507232 HSP90AA1P07900 732 aaKnown RBP16.09■□□□□ 0.17
SPDL1-206ENST00000507232 SDSP20132 328 aa16.09■□□□□ 0.17
SPDL1-206ENST00000507232 FLIIQ13045 1269 aa16.09■□□□□ 0.17
SPDL1-206ENST00000507232 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
SPDL1-206ENST00000507232 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
SPDL1-206ENST00000507232 LMOD2Q6P5Q4 547 aa16.07■□□□□ 0.16
SPDL1-206ENST00000507232 SNX21Q969T3 373 aa16.07■□□□□ 0.16
SPDL1-206ENST00000507232 PHAXQ9H814 394 aaKnown RBP16.07■□□□□ 0.16
SPDL1-206ENST00000507232 MAP3K5Q99683 1374 aa16.07■□□□□ 0.16
SPDL1-206ENST00000507232 NWD1Q149M9 1564 aa16.07■□□□□ 0.16
SPDL1-206ENST00000507232 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
SPDL1-206ENST00000507232 PSME1Q06323 249 aa16.06■□□□□ 0.16
SPDL1-206ENST00000507232 NBPF6Q5VWK0 638 aa16.06■□□□□ 0.16
SPDL1-206ENST00000507232 NBPF4Q96M43 638 aa16.06■□□□□ 0.16
SPDL1-206ENST00000507232 LGR6Q9HBX8 967 aa16.06■□□□□ 0.16
SPDL1-206ENST00000507232 ANKARQ7Z5J8 1434 aa16.06■□□□□ 0.16
SPDL1-206ENST00000507232 PNMA6EA0A0J9YXQ4 647 aa16.06■□□□□ 0.16
SPDL1-206ENST00000507232 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
SPDL1-206ENST00000507232 GNAI2P04899 355 aa16.04■□□□□ 0.16
SPDL1-206ENST00000507232 TAF7Q15545 349 aaPredicted RBP16.04■□□□□ 0.16
SPDL1-206ENST00000507232 K7ELQ4 463 aaPredicted RBP16.04■□□□□ 0.16
SPDL1-206ENST00000507232 KCNQ3O43525 872 aa16.04■□□□□ 0.16
SPDL1-206ENST00000507232 DDIT3P35638 169 aa16.04■□□□□ 0.16
SPDL1-206ENST00000507232 ANKLE2Q86XL3 938 aa16.04■□□□□ 0.16
SPDL1-206ENST00000507232 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms