RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 FAM43AQ8N2R8 423 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 ANKRD44Q8N8A2 993 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 MEIS3Q99687 375 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 PANK2Q9BZ23 570 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 C3P01024 1663 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 TECPR2O15040 1411 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 TTC22Q5TAA0 569 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 CEP85Q6P2H3 762 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 RPAP2Q8IXW5 612 aaPredicted RBP9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 MSH6P52701 1360 aa9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 KIF24Q5T7B8 1368 aa9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 ITSN1Q15811 1721 aa9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 PLEKHG3A1L390 1219 aa9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 F6X3S4 739 aa9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 MTHFSDQ2M296 383 aaKnown RBP9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 GAS2L2Q8NHY3 880 aa9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 GBP4Q96PP9 640 aa9.44□□□□□ -0.9
PPARGC1A-204ENST00000506055 CEBPAP49715 358 aaPredicted RBP9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 RAB3GAP1Q15042 981 aa9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 TSPYL4Q9UJ04 414 aa9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 CIZ1Q9ULV3 898 aaPredicted RBP9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 PTPRCP08575 1304 aa9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 MAP3K19Q56UN5 1328 aa9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 KNDC1Q76NI1 1749 aa9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 AKAP12Q02952 1782 aa9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 G2E3Q7L622 706 aa9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 RGS12O14924 1447 aa9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 USP6P35125 1406 aa9.43□□□□□ -0.9
PPARGC1A-204ENST00000506055 SDSP20132 328 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 AMPHP49418 695 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 NGDNQ8NEJ9 315 aaKnown RBP9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 RTL1A6NKG5 1358 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 KIAA0232Q92628 1395 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 USP26Q9BXU7 913 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 AMOTL2Q9Y2J4 779 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 OVOS2A0A0J9YW53 1432 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 OVOS2Q6IE36 1432 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 ADAMTS13Q76LX8 1427 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 ATP10DQ9P241 1426 aa9.42□□□□□ -0.9
PPARGC1A-204ENST00000506055 SSFA2P28290 1259 aa9.41□□□□□ -0.9
PPARGC1A-204ENST00000506055 CASC1Q6TDU7 716 aa9.41□□□□□ -0.9
PPARGC1A-204ENST00000506055 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.41□□□□□ -0.9
PPARGC1A-204ENST00000506055 CRB1P82279 1406 aa9.41□□□□□ -0.9
PPARGC1A-204ENST00000506055 MRE11P49959 708 aa9.41□□□□□ -0.9
PPARGC1A-204ENST00000506055 NUTM2GQ5VZR2 741 aa9.41□□□□□ -0.9
PPARGC1A-204ENST00000506055 RRAGDQ9NQL2 400 aaPredicted RBP9.41□□□□□ -0.9
PPARGC1A-204ENST00000506055 EID1Q9Y6B2 187 aa9.41□□□□□ -0.9
PPARGC1A-204ENST00000506055 RABEP1Q15276 862 aa9.4□□□□□ -0.9
PPARGC1A-204ENST00000506055 EYA1Q99502 592 aa9.4□□□□□ -0.9
PPARGC1A-204ENST00000506055 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.9
PPARGC1A-204ENST00000506055 NRKQ7Z2Y5 1582 aa9.4□□□□□ -0.9
PPARGC1A-204ENST00000506055 PEAK1Q9H792 1746 aa9.4□□□□□ -0.9
PPARGC1A-204ENST00000506055 HMMRO75330 724 aa9.4□□□□□ -0.9
PPARGC1A-204ENST00000506055 EIF5BO60841 1220 aaKnown RBP9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 STK31Q9BXU1 1019 aa9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 UBR1Q8IWV7 1749 aa9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 PLEKHG1Q9ULL1 1385 aa9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 CCT4P50991 539 aaKnown RBP9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 NLRP6P59044 892 aa9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 SKOR2Q2VWA4 1001 aaPredicted RBP9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 TSHZ3Q63HK5 1081 aa9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 EXOC6BQ9Y2D4 811 aa9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 PTPRUQ92729 1446 aa9.39□□□□□ -0.91
PPARGC1A-204ENST00000506055 FKBP5Q13451 457 aaPredicted RBP9.38□□□□□ -0.91
PPARGC1A-204ENST00000506055 LTV1Q96GA3 475 aaPredicted RBP9.38□□□□□ -0.91
PPARGC1A-204ENST00000506055 ARHGEF10O15013 1369 aa9.38□□□□□ -0.91
PPARGC1A-204ENST00000506055 FLT4P35916 1363 aa9.38□□□□□ -0.91
PPARGC1A-204ENST00000506055 TTC21AQ8NDW8 1320 aa9.38□□□□□ -0.91
PPARGC1A-204ENST00000506055 GOLGA6L22H0YM25 854 aa9.38□□□□□ -0.91
PPARGC1A-204ENST00000506055 GNAI2P04899 355 aa9.38□□□□□ -0.91
PPARGC1A-204ENST00000506055 GAS2L3Q86XJ1 694 aa9.38□□□□□ -0.91
PPARGC1A-204ENST00000506055 REC8O95072 547 aa9.37□□□□□ -0.91
PPARGC1A-204ENST00000506055 PDE1AP54750 535 aa9.37□□□□□ -0.91
PPARGC1A-204ENST00000506055 SBNO1A3KN83 1393 aa9.37□□□□□ -0.91
PPARGC1A-204ENST00000506055 RIMS1Q86UR5 1692 aaKnown RBP9.37□□□□□ -0.91
PPARGC1A-204ENST00000506055 ERC2O15083 957 aa9.37□□□□□ -0.91
PPARGC1A-204ENST00000506055 BAG4O95429 457 aaKnown RBP9.37□□□□□ -0.91
PPARGC1A-204ENST00000506055 DDX49Q9Y6V7 483 aaKnown RBP9.37□□□□□ -0.91
PPARGC1A-204ENST00000506055 SSH2Q76I76 1423 aa9.37□□□□□ -0.91
PPARGC1A-204ENST00000506055 GNAT3A8MTJ3 354 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 ST18O60284 1047 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 PTMSP20962 102 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 FLIIQ13045 1269 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 PKP1Q13835 747 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 MCTP1Q6DN14 999 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 CCDC30Q5VVM6 783 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 C14orf37Q86TY3 774 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 IGSF1Q8N6C5 1336 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 RGPD1P0DJD0 1748 aa9.36□□□□□ -0.91
PPARGC1A-204ENST00000506055 PNMA6EA0A0J9YXQ4 647 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 ZGPATQ8N5A5 531 aaKnown RBP9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 LRRCC1Q9C099 1032 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 CEP170BQ9Y4F5 1589 aaPredicted RBP9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 TOPAZ1Q8N9V7 1692 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms