RNA–Protein interactions for RNA: ENST00000505453.1

PDE4D-212, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-212ENST00000505453 TRMT2AQ8IZ69 625 aaKnown RBP13.58□□□□□ -0.24
PDE4D-212ENST00000505453 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
PDE4D-212ENST00000505453 PNNQ9H307 717 aaKnown RBP13.58□□□□□ -0.24
PDE4D-212ENST00000505453 STRCQ7RTU9 1775 aa13.57□□□□□ -0.24
PDE4D-212ENST00000505453 HMOX1P09601 288 aa13.57□□□□□ -0.24
PDE4D-212ENST00000505453 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
PDE4D-212ENST00000505453 DCCP43146 1447 aa13.57□□□□□ -0.24
PDE4D-212ENST00000505453 STRCP1A6NGW2 1772 aa13.57□□□□□ -0.24
PDE4D-212ENST00000505453 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
PDE4D-212ENST00000505453 IQSEC2Q5JU85 1478 aa13.57□□□□□ -0.24
PDE4D-212ENST00000505453 MSH6P52701 1360 aa13.57□□□□□ -0.24
PDE4D-212ENST00000505453 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
PDE4D-212ENST00000505453 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
PDE4D-212ENST00000505453 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
PDE4D-212ENST00000505453 CCDC27Q2M243 656 aa13.56□□□□□ -0.24
PDE4D-212ENST00000505453 BCL11BQ9C0K0 894 aaPredicted RBP13.56□□□□□ -0.24
PDE4D-212ENST00000505453 LRRC7Q96NW7 1537 aa13.56□□□□□ -0.24
PDE4D-212ENST00000505453 AMPHP49418 695 aa13.56□□□□□ -0.24
PDE4D-212ENST00000505453 RCAN3Q9UKA8 241 aa13.56□□□□□ -0.24
PDE4D-212ENST00000505453 RNF123Q5XPI4 1314 aa13.55□□□□□ -0.24
PDE4D-212ENST00000505453 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
PDE4D-212ENST00000505453 SBNO1A3KN83 1393 aa13.55□□□□□ -0.24
PDE4D-212ENST00000505453 E9PSI1 815 aa13.55□□□□□ -0.24
PDE4D-212ENST00000505453 STK25O00506 426 aa13.55□□□□□ -0.24
PDE4D-212ENST00000505453 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
PDE4D-212ENST00000505453 DDX17Q92841 729 aaKnown RBP13.55□□□□□ -0.24
PDE4D-212ENST00000505453 PHACTR3Q96KR7 559 aa13.55□□□□□ -0.24
PDE4D-212ENST00000505453 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
PDE4D-212ENST00000505453 HOXC9P31274 260 aa13.53□□□□□ -0.24
PDE4D-212ENST00000505453 RIPK4P57078 832 aa13.53□□□□□ -0.24
PDE4D-212ENST00000505453 LMOD2Q6P5Q4 547 aa13.53□□□□□ -0.24
PDE4D-212ENST00000505453 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
PDE4D-212ENST00000505453 FLT4P35916 1363 aa13.52□□□□□ -0.24
PDE4D-212ENST00000505453 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.25
PDE4D-212ENST00000505453 AEBP1Q8IUX7 1158 aa13.52□□□□□ -0.25
PDE4D-212ENST00000505453 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.25
PDE4D-212ENST00000505453 BRINP3Q76B58 766 aa13.51□□□□□ -0.25
PDE4D-212ENST00000505453 EFCAB3Q8N7B9 438 aa13.51□□□□□ -0.25
PDE4D-212ENST00000505453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDE4D-212ENST00000505453 SLAIN2Q9P270 581 aa13.51□□□□□ -0.25
PDE4D-212ENST00000505453 GCP02774 474 aa13.5□□□□□ -0.25
PDE4D-212ENST00000505453 NEFMP07197 916 aa13.5□□□□□ -0.25
PDE4D-212ENST00000505453 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
PDE4D-212ENST00000505453 KIF24Q5T7B8 1368 aa13.5□□□□□ -0.25
PDE4D-212ENST00000505453 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
PDE4D-212ENST00000505453 HS6ST3Q8IZP7 471 aa13.49□□□□□ -0.25
PDE4D-212ENST00000505453 IP6K1Q92551 441 aa13.49□□□□□ -0.25
PDE4D-212ENST00000505453 EYA1Q99502 592 aa13.49□□□□□ -0.25
PDE4D-212ENST00000505453 USP19O94966 1318 aa13.49□□□□□ -0.25
PDE4D-212ENST00000505453 NPHP3Q7Z494 1330 aa13.49□□□□□ -0.25
PDE4D-212ENST00000505453 PEAK1Q9H792 1746 aa13.49□□□□□ -0.25
PDE4D-212ENST00000505453 ZBTB7CA1YPR0 619 aa13.48□□□□□ -0.25
PDE4D-212ENST00000505453 LTV1Q96GA3 475 aaPredicted RBP13.48□□□□□ -0.25
PDE4D-212ENST00000505453 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
PDE4D-212ENST00000505453 ARHGEF25Q86VW2 580 aa13.47□□□□□ -0.25
PDE4D-212ENST00000505453 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
PDE4D-212ENST00000505453 PDCD7Q8N8D1 485 aaKnown RBP13.47□□□□□ -0.25
PDE4D-212ENST00000505453 ARHGEF10O15013 1369 aa13.47□□□□□ -0.25
PDE4D-212ENST00000505453 KIF1AQ12756 1690 aa13.46□□□□□ -0.26
PDE4D-212ENST00000505453 RTL1A6NKG5 1358 aa13.46□□□□□ -0.26
PDE4D-212ENST00000505453 IL16Q14005 1332 aa13.46□□□□□ -0.26
PDE4D-212ENST00000505453 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.26
PDE4D-212ENST00000505453 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.26
PDE4D-212ENST00000505453 MYH16Q9H6N6 1097 aa13.46□□□□□ -0.26
PDE4D-212ENST00000505453 USP54Q70EL1 1684 aa13.45□□□□□ -0.26
PDE4D-212ENST00000505453 NFAT5O94916 1531 aa13.45□□□□□ -0.26
PDE4D-212ENST00000505453 MARF1Q9Y4F3 1742 aaKnown RBP13.44□□□□□ -0.26
PDE4D-212ENST00000505453 SLIT3O75094 1523 aa13.44□□□□□ -0.26
PDE4D-212ENST00000505453 PLIN1O60240 522 aa13.44□□□□□ -0.26
PDE4D-212ENST00000505453 ZC3H6P61129 1189 aaKnown RBP13.43□□□□□ -0.26
PDE4D-212ENST00000505453 CABLES1Q8TDN4 633 aa13.43□□□□□ -0.26
PDE4D-212ENST00000505453 TSR2Q969E8 191 aaKnown RBP13.43□□□□□ -0.26
PDE4D-212ENST00000505453 THUMPD2Q9BTF0 503 aaKnown RBP13.43□□□□□ -0.26
PDE4D-212ENST00000505453 PXDNQ92626 1479 aa13.43□□□□□ -0.26
PDE4D-212ENST00000505453 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
PDE4D-212ENST00000505453 MTHFSDQ2M296 383 aaKnown RBP13.42□□□□□ -0.26
PDE4D-212ENST00000505453 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
PDE4D-212ENST00000505453 L3MBTL3Q96JM7 780 aaPredicted RBP13.42□□□□□ -0.26
PDE4D-212ENST00000505453 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
PDE4D-212ENST00000505453 PPP4R2Q9NY27 417 aa13.42□□□□□ -0.26
PDE4D-212ENST00000505453 AXIN2Q9Y2T1 843 aa13.42□□□□□ -0.26
PDE4D-212ENST00000505453 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
PDE4D-212ENST00000505453 TNS3Q68CZ2 1445 aa13.42□□□□□ -0.26
PDE4D-212ENST00000505453 KDRP35968 1356 aa13.42□□□□□ -0.26
PDE4D-212ENST00000505453 XIRP1Q702N8 1843 aaKnown RBP13.41□□□□□ -0.26
PDE4D-212ENST00000505453 FANCIQ9NVI1 1328 aa13.41□□□□□ -0.26
PDE4D-212ENST00000505453 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
PDE4D-212ENST00000505453 BCAR3O75815 825 aa13.41□□□□□ -0.26
PDE4D-212ENST00000505453 EXOSC9Q06265 439 aaKnown RBP13.41□□□□□ -0.26
PDE4D-212ENST00000505453 LMOD3Q0VAK6 560 aa13.41□□□□□ -0.26
PDE4D-212ENST00000505453 DCTN1Q14203 1278 aa13.41□□□□□ -0.26
PDE4D-212ENST00000505453 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
PDE4D-212ENST00000505453 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
PDE4D-212ENST00000505453 LRRC59Q96AG4 307 aaKnown RBP13.4□□□□□ -0.26
PDE4D-212ENST00000505453 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
PDE4D-212ENST00000505453 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
PDE4D-212ENST00000505453 CALD1Q05682 793 aaKnown RBP13.39□□□□□ -0.27
PDE4D-212ENST00000505453 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
PDE4D-212ENST00000505453 RGPD1P0DJD0 1748 aa13.39□□□□□ -0.27
PDE4D-212ENST00000505453 RARSP54136 660 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms