RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 AEBP1Q8IUX7 1158 aa11.51□□□□□ -0.57
NEDD4-203ENST00000502612 ANKMY2Q8IV38 441 aa11.51□□□□□ -0.57
NEDD4-203ENST00000502612 STAU1O95793 577 aaKnown RBP11.5□□□□□ -0.57
NEDD4-203ENST00000502612 MPNDQ8N594 471 aa11.5□□□□□ -0.57
NEDD4-203ENST00000502612 ZNF784Q8NCA9 323 aaPredicted RBP11.5□□□□□ -0.57
NEDD4-203ENST00000502612 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
NEDD4-203ENST00000502612 ALDH1A1P00352 501 aa11.49□□□□□ -0.57
NEDD4-203ENST00000502612 PPP1R26Q5T8A7 1209 aaPredicted RBP11.49□□□□□ -0.57
NEDD4-203ENST00000502612 ATP1A2P50993 1020 aa11.48□□□□□ -0.57
NEDD4-203ENST00000502612 ERVK-9P63128 1117 aa11.48□□□□□ -0.57
NEDD4-203ENST00000502612 PSME1Q06323 249 aa11.48□□□□□ -0.57
NEDD4-203ENST00000502612 USP4Q13107 963 aa11.48□□□□□ -0.57
NEDD4-203ENST00000502612 CCDC116Q8IYX3 515 aa11.48□□□□□ -0.57
NEDD4-203ENST00000502612 FAM200AQ8TCP9 573 aa11.48□□□□□ -0.57
NEDD4-203ENST00000502612 SFI1A8K8P3 1242 aa11.47□□□□□ -0.57
NEDD4-203ENST00000502612 TNFRSF10AO00220 468 aa11.47□□□□□ -0.57
NEDD4-203ENST00000502612 FAM69CQ0P6D2 419 aa11.47□□□□□ -0.57
NEDD4-203ENST00000502612 CCDC102BQ68D86 513 aa11.47□□□□□ -0.57
NEDD4-203ENST00000502612 SIX5Q8N196 739 aa11.47□□□□□ -0.57
NEDD4-203ENST00000502612 LARGE2Q8N3Y3 721 aa11.47□□□□□ -0.57
NEDD4-203ENST00000502612 TPCN2Q8NHX9 752 aa11.47□□□□□ -0.57
NEDD4-203ENST00000502612 LGR5O75473 907 aa11.46□□□□□ -0.57
NEDD4-203ENST00000502612 MYCP01106 439 aaPredicted RBP11.46□□□□□ -0.57
NEDD4-203ENST00000502612 NR5A1Q13285 461 aa11.46□□□□□ -0.57
NEDD4-203ENST00000502612 CC2D2BQ6DHV5 1058 aa11.46□□□□□ -0.57
NEDD4-203ENST00000502612 OSBPL3Q9H4L5 887 aa11.46□□□□□ -0.57
NEDD4-203ENST00000502612 V9GY48 417 aaPredicted RBP11.46□□□□□ -0.57
NEDD4-203ENST00000502612 LILRA1O75019 489 aa11.45□□□□□ -0.58
NEDD4-203ENST00000502612 NNTQ13423 1086 aa11.45□□□□□ -0.58
NEDD4-203ENST00000502612 CCDC125Q86Z20 511 aa11.45□□□□□ -0.58
NEDD4-203ENST00000502612 J3QL48 77 aa11.44□□□□□ -0.58
NEDD4-203ENST00000502612 GDF9O60383 454 aa11.44□□□□□ -0.58
NEDD4-203ENST00000502612 DHX9Q08211 1270 aaKnown RBP11.44□□□□□ -0.58
NEDD4-203ENST00000502612 PDE4CQ08493 712 aa11.44□□□□□ -0.58
NEDD4-203ENST00000502612 SIRT1Q96EB6 747 aa11.44□□□□□ -0.58
NEDD4-203ENST00000502612 ADD1P35611 737 aaKnown RBP11.43□□□□□ -0.58
NEDD4-203ENST00000502612 TRIM67Q6ZTA4 783 aa11.43□□□□□ -0.58
NEDD4-203ENST00000502612 PODXL2Q9NZ53 605 aa11.43□□□□□ -0.58
NEDD4-203ENST00000502612 KCTD17Q8N5Z5 321 aa11.42□□□□□ -0.58
NEDD4-203ENST00000502612 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
NEDD4-203ENST00000502612 SNIP1Q8TAD8 396 aaKnown RBP11.42□□□□□ -0.58
NEDD4-203ENST00000502612 WASF2Q9Y6W5 498 aa11.42□□□□□ -0.58
NEDD4-203ENST00000502612 SEC13P55735 322 aa11.41□□□□□ -0.58
NEDD4-203ENST00000502612 MYT1Q01538 1121 aa11.41□□□□□ -0.58
NEDD4-203ENST00000502612 ZBTB7CA1YPR0 619 aa11.4□□□□□ -0.58
NEDD4-203ENST00000502612 TMEM229AB2RXF0 380 aa11.4□□□□□ -0.58
NEDD4-203ENST00000502612 BRD1O95696 1058 aa11.4□□□□□ -0.58
NEDD4-203ENST00000502612 SCNN1DP51172 638 aa11.4□□□□□ -0.58
NEDD4-203ENST00000502612 PHLDB3Q6NSJ2 640 aa11.4□□□□□ -0.58
NEDD4-203ENST00000502612 TTC24A2A3L6 582 aaPredicted RBP11.39□□□□□ -0.59
NEDD4-203ENST00000502612 CBLBQ13191 982 aa11.39□□□□□ -0.59
NEDD4-203ENST00000502612 TSEN2Q8NCE0 465 aaKnown RBP11.39□□□□□ -0.59
NEDD4-203ENST00000502612 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
NEDD4-203ENST00000502612 ZNF358Q9NW07 568 aa11.39□□□□□ -0.59
NEDD4-203ENST00000502612 SCNN1AP37088 669 aa11.38□□□□□ -0.59
NEDD4-203ENST00000502612 CYP4X1Q8N118 509 aa11.38□□□□□ -0.59
NEDD4-203ENST00000502612 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
NEDD4-203ENST00000502612 ITPKCQ96DU7 683 aa11.38□□□□□ -0.59
NEDD4-203ENST00000502612 ETNK1Q9HBU6 452 aa11.38□□□□□ -0.59
NEDD4-203ENST00000502612 RAB6BQ9NRW1 208 aa11.38□□□□□ -0.59
NEDD4-203ENST00000502612 TOR4AQ9NXH8 423 aa11.38□□□□□ -0.59
NEDD4-203ENST00000502612 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
NEDD4-203ENST00000502612 EMILIN1Q9Y6C2 1016 aa11.38□□□□□ -0.59
NEDD4-203ENST00000502612 PRMT3O60678 531 aa11.37□□□□□ -0.59
NEDD4-203ENST00000502612 SMPD1P17405 629 aa11.37□□□□□ -0.59
NEDD4-203ENST00000502612 GDF10P55107 478 aa11.37□□□□□ -0.59
NEDD4-203ENST00000502612 GAS2L2Q8NHY3 880 aa11.37□□□□□ -0.59
NEDD4-203ENST00000502612 PRIMPOLQ96LW4 560 aa11.37□□□□□ -0.59
NEDD4-203ENST00000502612 ZFAND3Q9H8U3 227 aa11.37□□□□□ -0.59
NEDD4-203ENST00000502612 RBM19Q9Y4C8 960 aaKnown RBP11.37□□□□□ -0.59
NEDD4-203ENST00000502612 KLF16Q9BXK1 252 aaPredicted RBP11.36□□□□□ -0.59
NEDD4-203ENST00000502612 SERTAD1Q9UHV2 236 aa11.36□□□□□ -0.59
NEDD4-203ENST00000502612 ZIC2O95409 532 aaPredicted RBP11.35□□□□□ -0.59
NEDD4-203ENST00000502612 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
NEDD4-203ENST00000502612 SWI5Q1ZZU3 235 aa11.35□□□□□ -0.59
NEDD4-203ENST00000502612 KDF1Q8NAX2 398 aaPredicted RBP11.35□□□□□ -0.59
NEDD4-203ENST00000502612 TIMP2P16035 220 aa11.34□□□□□ -0.59
NEDD4-203ENST00000502612 SSFA2P28290 1259 aa11.34□□□□□ -0.59
NEDD4-203ENST00000502612 WDR4P57081 412 aaKnown RBP11.34□□□□□ -0.59
NEDD4-203ENST00000502612 KCNA1Q09470 495 aa11.34□□□□□ -0.59
NEDD4-203ENST00000502612 CYP2U1Q7Z449 544 aa11.34□□□□□ -0.59
NEDD4-203ENST00000502612 HINFPQ9BQA5 517 aa11.34□□□□□ -0.59
NEDD4-203ENST00000502612 ARHGEF10LQ9HCE6 1279 aa11.34□□□□□ -0.59
NEDD4-203ENST00000502612 HPS1Q92902 700 aa11.33□□□□□ -0.6
NEDD4-203ENST00000502612 AGBL1Q96MI9 1066 aa11.33□□□□□ -0.6
NEDD4-203ENST00000502612 IVNS1ABPQ9Y6Y0 642 aa11.33□□□□□ -0.6
NEDD4-203ENST00000502612 ADH1AP07327 375 aa11.32□□□□□ -0.6
NEDD4-203ENST00000502612 OCLNQ16625 522 aa11.32□□□□□ -0.6
NEDD4-203ENST00000502612 TNS4Q8IZW8 715 aa11.32□□□□□ -0.6
NEDD4-203ENST00000502612 PURBQ96QR8 312 aaKnown RBP11.32□□□□□ -0.6
NEDD4-203ENST00000502612 IL2RAP01589 272 aa11.31□□□□□ -0.6
NEDD4-203ENST00000502612 INHAP05111 366 aa11.31□□□□□ -0.6
NEDD4-203ENST00000502612 PRR20EP86478 221 aa11.31□□□□□ -0.6
NEDD4-203ENST00000502612 PRR20CP86479 221 aa11.31□□□□□ -0.6
NEDD4-203ENST00000502612 PRR20DP86480 221 aa11.31□□□□□ -0.6
NEDD4-203ENST00000502612 PRR20BP86481 221 aa11.31□□□□□ -0.6
NEDD4-203ENST00000502612 PRR20AP86496 221 aa11.31□□□□□ -0.6
NEDD4-203ENST00000502612 GZF1Q9H116 711 aaPredicted RBP11.31□□□□□ -0.6
NEDD4-203ENST00000502612 M0R2N6 131 aa11.3□□□□□ -0.6
NEDD4-203ENST00000502612 GNRH1P01148 92 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms