RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 FSD2A1L4K1 749 aa28.69■■■□□ 2.18
SNF8-202ENST00000502492 CHL1O00533 1208 aa28.69■■■□□ 2.18
SNF8-202ENST00000502492 HAP1P54257 671 aaPredicted RBP28.69■■■□□ 2.18
SNF8-202ENST00000502492 SULT6B1Q6IMI4 303 aa28.69■■■□□ 2.18
SNF8-202ENST00000502492 DCTPP1Q9H773 170 aa28.69■■■□□ 2.18
SNF8-202ENST00000502492 CIZ1Q9ULV3 898 aaPredicted RBP28.68■■■□□ 2.18
SNF8-202ENST00000502492 OVOS2A0A0J9YW53 1432 aa28.68■■■□□ 2.18
SNF8-202ENST00000502492 OVOS2Q6IE36 1432 aa28.68■■■□□ 2.18
SNF8-202ENST00000502492 FAM43AQ8N2R8 423 aa28.68■■■□□ 2.18
SNF8-202ENST00000502492 TRAK2O60296 914 aa28.67■■■□□ 2.18
SNF8-202ENST00000502492 RGS12O14924 1447 aa28.67■■■□□ 2.18
SNF8-202ENST00000502492 TOPAZ1Q8N9V7 1692 aa28.66■■■□□ 2.18
SNF8-202ENST00000502492 KIAA0232Q92628 1395 aa28.66■■■□□ 2.18
SNF8-202ENST00000502492 DDX11L8A8MPP1 907 aa28.66■■■□□ 2.18
SNF8-202ENST00000502492 PLEKHG3A1L390 1219 aa28.65■■■□□ 2.18
SNF8-202ENST00000502492 CDC45O75419 566 aa28.65■■■□□ 2.18
SNF8-202ENST00000502492 PLEKHM2Q8IWE5 1019 aa28.65■■■□□ 2.18
SNF8-202ENST00000502492 RBM33Q96EV2 1170 aaKnown RBP28.64■■■□□ 2.18
SNF8-202ENST00000502492 ACEP12821 1306 aa28.64■■■□□ 2.18
SNF8-202ENST00000502492 RGPD1P0DJD0 1748 aa28.63■■■□□ 2.17
SNF8-202ENST00000502492 HSP90AB1P08238 724 aaKnown RBP28.63■■■□□ 2.17
SNF8-202ENST00000502492 PROSER2Q86WR7 435 aaPredicted RBP28.63■■■□□ 2.17
SNF8-202ENST00000502492 STRCP1A6NGW2 1772 aa28.63■■■□□ 2.17
SNF8-202ENST00000502492 NALCNQ8IZF0 1738 aa28.63■■■□□ 2.17
SNF8-202ENST00000502492 GOLGA6L3A6NEY3 463 aa28.63■■■□□ 2.17
SNF8-202ENST00000502492 GSPT1P15170 499 aaKnown RBP28.63■■■□□ 2.17
SNF8-202ENST00000502492 ANKRD44Q8N8A2 993 aa28.63■■■□□ 2.17
SNF8-202ENST00000502492 ATP10DQ9P241 1426 aa28.63■■■□□ 2.17
SNF8-202ENST00000502492 USP6P35125 1406 aa28.62■■■□□ 2.17
SNF8-202ENST00000502492 USP31Q70CQ4 1352 aa28.61■■■□□ 2.17
SNF8-202ENST00000502492 PEAK1Q9H792 1746 aa28.61■■■□□ 2.17
SNF8-202ENST00000502492 KRT24Q2M2I5 525 aa28.61■■■□□ 2.17
SNF8-202ENST00000502492 EIF5BO60841 1220 aaKnown RBP28.6■■■□□ 2.17
SNF8-202ENST00000502492 AEBP2Q6ZN18 517 aaPredicted RBP28.6■■■□□ 2.17
SNF8-202ENST00000502492 RPAP2Q8IXW5 612 aaPredicted RBP28.6■■■□□ 2.17
SNF8-202ENST00000502492 CD2BP2O95400 341 aaKnown RBP28.6■■■□□ 2.17
SNF8-202ENST00000502492 MCM10Q7L590 875 aa28.6■■■□□ 2.17
SNF8-202ENST00000502492 PTPRCP08575 1304 aa28.6■■■□□ 2.17
SNF8-202ENST00000502492 XRCC6P12956 609 aaKnown RBP eCLIP28.59■■■□□ 2.171e-6■■■■■ 27.1
SNF8-202ENST00000502492 ZNF335Q9H4Z2 1342 aaPredicted RBP28.59■■■□□ 2.17
SNF8-202ENST00000502492 RAB3GAP1Q15042 981 aa28.59■■■□□ 2.17
SNF8-202ENST00000502492 TNPO1Q92973 898 aaKnown RBP28.59■■■□□ 2.17
SNF8-202ENST00000502492 GZF1Q9H116 711 aaPredicted RBP28.59■■■□□ 2.17
SNF8-202ENST00000502492 ADGRL3Q9HAR2 1447 aa28.59■■■□□ 2.17
SNF8-202ENST00000502492 K7ELQ4 463 aaPredicted RBP28.58■■■□□ 2.17
SNF8-202ENST00000502492 HSP90AB2PQ58FF8 381 aa28.58■■■□□ 2.17
SNF8-202ENST00000502492 TTC22Q5TAA0 569 aa28.58■■■□□ 2.17
SNF8-202ENST00000502492 CRB1P82279 1406 aa28.58■■■□□ 2.17
SNF8-202ENST00000502492 CEP85Q6P2H3 762 aa28.57■■■□□ 2.16
SNF8-202ENST00000502492 SSH2Q76I76 1423 aa28.56■■■□□ 2.16
SNF8-202ENST00000502492 TMEM94Q12767 1356 aa28.55■■■□□ 2.16
SNF8-202ENST00000502492 C14orf37Q86TY3 774 aa28.55■■■□□ 2.16
SNF8-202ENST00000502492 RBM42Q9BTD8 480 aaKnown RBP28.55■■■□□ 2.16
SNF8-202ENST00000502492 ANO8Q9HCE9 1232 aaPredicted RBP28.55■■■□□ 2.16
SNF8-202ENST00000502492 RTL1A6NKG5 1358 aa28.55■■■□□ 2.16
SNF8-202ENST00000502492 MSH6P52701 1360 aa28.54■■■□□ 2.16
SNF8-202ENST00000502492 GBP4Q96PP9 640 aa28.53■■■□□ 2.16
SNF8-202ENST00000502492 ARHGEF10O15013 1369 aa28.53■■■□□ 2.16
SNF8-202ENST00000502492 C16orf71Q8IYS4 520 aaPredicted RBP28.53■■■□□ 2.16
SNF8-202ENST00000502492 NUTM2FA1L443 756 aa28.52■■■□□ 2.16
SNF8-202ENST00000502492 HSP90AA1P07900 732 aaKnown RBP28.51■■■□□ 2.15
SNF8-202ENST00000502492 ISY1Q9ULR0 285 aaKnown RBP28.49■■■□□ 2.15
SNF8-202ENST00000502492 MEIS3Q99687 375 aa28.49■■■□□ 2.15
SNF8-202ENST00000502492 TTC21AQ8NDW8 1320 aa28.48■■■□□ 2.15
SNF8-202ENST00000502492 MRE11P49959 708 aa28.48■■■□□ 2.15
SNF8-202ENST00000502492 RABEP1Q15276 862 aa28.48■■■□□ 2.15
SNF8-202ENST00000502492 C19orf44Q9H6X5 657 aa28.48■■■□□ 2.15
SNF8-202ENST00000502492 MAP3K19Q56UN5 1328 aa28.48■■■□□ 2.15
SNF8-202ENST00000502492 SLC4A2P04920 1241 aa28.48■■■□□ 2.15
SNF8-202ENST00000502492 GAS2L2Q8NHY3 880 aa28.48■■■□□ 2.15
SNF8-202ENST00000502492 USP26Q9BXU7 913 aa28.48■■■□□ 2.15
SNF8-202ENST00000502492 FMN2Q9NZ56 1722 aa28.47■■■□□ 2.15
SNF8-202ENST00000502492 ANKARQ7Z5J8 1434 aa28.47■■■□□ 2.15
SNF8-202ENST00000502492 PTMSP20962 102 aa28.47■■■□□ 2.15
SNF8-202ENST00000502492 OTUD7AQ8TE49 926 aaPredicted RBP28.47■■■□□ 2.15
SNF8-202ENST00000502492 KDRP35968 1356 aa28.46■■■□□ 2.15
SNF8-202ENST00000502492 SKOR2Q2VWA4 1001 aaPredicted RBP28.46■■■□□ 2.15
SNF8-202ENST00000502492 ARXQ96QS3 562 aa28.46■■■□□ 2.15
SNF8-202ENST00000502492 MTHFSDQ2M296 383 aaKnown RBP28.45■■■□□ 2.14
SNF8-202ENST00000502492 CLEC17AQ6ZS10 378 aa28.45■■■□□ 2.14
SNF8-202ENST00000502492 PANK2Q9BZ23 570 aa28.45■■■□□ 2.14
SNF8-202ENST00000502492 SBNO1A3KN83 1393 aa28.45■■■□□ 2.14
SNF8-202ENST00000502492 FOXD4L1Q9NU39 408 aa28.44■■■□□ 2.14
SNF8-202ENST00000502492 FLT4P35916 1363 aa28.44■■■□□ 2.14
SNF8-202ENST00000502492 SDSP20132 328 aa28.44■■■□□ 2.14
SNF8-202ENST00000502492 FOXO3O43524 673 aa28.43■■■□□ 2.14
SNF8-202ENST00000502492 MIS18AQ9NYP9 233 aa28.43■■■□□ 2.14
SNF8-202ENST00000502492 SMARCA5O60264 1052 aaPredicted RBP28.42■■■□□ 2.14
SNF8-202ENST00000502492 RTF1Q92541 710 aaKnown RBP28.42■■■□□ 2.14
SNF8-202ENST00000502492 RRAGDQ9NQL2 400 aaPredicted RBP28.42■■■□□ 2.14
SNF8-202ENST00000502492 SOX12O15370 315 aa28.41■■■□□ 2.14
SNF8-202ENST00000502492 GRPEL1Q9HAV7 217 aa28.41■■■□□ 2.14
SNF8-202ENST00000502492 TSPYL4Q9UJ04 414 aa28.41■■■□□ 2.14
SNF8-202ENST00000502492 DCCP43146 1447 aa28.41■■■□□ 2.14
SNF8-202ENST00000502492 HMMRO75330 724 aa28.41■■■□□ 2.14
SNF8-202ENST00000502492 CCT4P50991 539 aaKnown RBP28.4■■■□□ 2.14
SNF8-202ENST00000502492 G2E3Q7L622 706 aa28.4■■■□□ 2.14
SNF8-202ENST00000502492 IGSF1Q8N6C5 1336 aa28.4■■■□□ 2.14
SNF8-202ENST00000502492 CASC1Q6TDU7 716 aa28.4■■■□□ 2.14
SNF8-202ENST00000502492 XIRP1Q702N8 1843 aaKnown RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms