RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 ESCO1Q5FWF5 840 aa13.63□□□□□ -0.23
AC055717.1-201ENST00000502221 BMP2KLQ5H9B9 411 aa13.63□□□□□ -0.23
AC055717.1-201ENST00000502221 ADAMTS2O95450 1211 aa13.63□□□□□ -0.23
AC055717.1-201ENST00000502221 TCP11L2Q8N4U5 519 aa13.63□□□□□ -0.23
AC055717.1-201ENST00000502221 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
AC055717.1-201ENST00000502221 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
AC055717.1-201ENST00000502221 USP32Q8NFA0 1604 aa13.62□□□□□ -0.23
AC055717.1-201ENST00000502221 NUCB1Q02818 461 aa13.62□□□□□ -0.23
AC055717.1-201ENST00000502221 PDLIM2Q96JY6 352 aa13.62□□□□□ -0.23
AC055717.1-201ENST00000502221 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
AC055717.1-201ENST00000502221 FOXO3O43524 673 aa13.61□□□□□ -0.23
AC055717.1-201ENST00000502221 PRDM4Q9UKN5 801 aa13.61□□□□□ -0.23
AC055717.1-201ENST00000502221 DDX49Q9Y6V7 483 aaKnown RBP13.61□□□□□ -0.23
AC055717.1-201ENST00000502221 IL16Q14005 1332 aa13.6□□□□□ -0.23
AC055717.1-201ENST00000502221 RGS12O14924 1447 aa13.6□□□□□ -0.23
AC055717.1-201ENST00000502221 UTP14CQ5TAP6 766 aaKnown RBP13.6□□□□□ -0.23
AC055717.1-201ENST00000502221 CWC22Q9HCG8 908 aaKnown RBP13.6□□□□□ -0.23
AC055717.1-201ENST00000502221 RXRBP28702 533 aa13.6□□□□□ -0.23
AC055717.1-201ENST00000502221 RIPK4P57078 832 aa13.6□□□□□ -0.23
AC055717.1-201ENST00000502221 ZNF428Q96B54 188 aa13.6□□□□□ -0.23
AC055717.1-201ENST00000502221 CCDC39Q9UFE4 941 aa13.6□□□□□ -0.23
AC055717.1-201ENST00000502221 MORC1Q86VD1 984 aa13.59□□□□□ -0.23
AC055717.1-201ENST00000502221 GCC1Q96CN9 775 aa13.59□□□□□ -0.23
AC055717.1-201ENST00000502221 PUS7Q96PZ0 661 aaKnown RBP13.59□□□□□ -0.23
AC055717.1-201ENST00000502221 PODXL2Q9NZ53 605 aa13.59□□□□□ -0.23
AC055717.1-201ENST00000502221 NSD2O96028 1365 aa13.59□□□□□ -0.23
AC055717.1-201ENST00000502221 NPHP3Q7Z494 1330 aa13.59□□□□□ -0.23
AC055717.1-201ENST00000502221 SASS6Q6UVJ0 657 aa13.58□□□□□ -0.24
AC055717.1-201ENST00000502221 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
AC055717.1-201ENST00000502221 PRAM1Q96QH2 718 aa13.58□□□□□ -0.24
AC055717.1-201ENST00000502221 CDK12Q9NYV4 1490 aaPredicted RBP13.58□□□□□ -0.24
AC055717.1-201ENST00000502221 DLC1Q96QB1 1528 aa13.58□□□□□ -0.24
AC055717.1-201ENST00000502221 BAG4O95429 457 aaKnown RBP13.58□□□□□ -0.24
AC055717.1-201ENST00000502221 ZKSCAN5Q9Y2L8 839 aa13.58□□□□□ -0.24
AC055717.1-201ENST00000502221 ABCA3Q99758 1704 aa13.58□□□□□ -0.24
AC055717.1-201ENST00000502221 ADGRB2O60241 1585 aa13.57□□□□□ -0.24
AC055717.1-201ENST00000502221 UPF1Q92900 1129 aaKnown RBP eCLIP13.57□□□□□ -0.24
AC055717.1-201ENST00000502221 NGLY1Q96IV0 654 aa13.57□□□□□ -0.24
AC055717.1-201ENST00000502221 QTRT2Q9H974 415 aaKnown RBP13.57□□□□□ -0.24
AC055717.1-201ENST00000502221 ARHGEF28Q8N1W1 1705 aaKnown RBP13.57□□□□□ -0.24
AC055717.1-201ENST00000502221 RABEP1Q15276 862 aa13.56□□□□□ -0.24
AC055717.1-201ENST00000502221 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
AC055717.1-201ENST00000502221 CARD14Q9BXL6 1004 aa13.56□□□□□ -0.24
AC055717.1-201ENST00000502221 ZBTB40Q9NUA8 1239 aa13.56□□□□□ -0.24
AC055717.1-201ENST00000502221 KLHL34Q8N239 644 aa13.56□□□□□ -0.24
AC055717.1-201ENST00000502221 SIRT1Q96EB6 747 aa13.56□□□□□ -0.24
AC055717.1-201ENST00000502221 R3HCC1Q9Y3T6 440 aaKnown RBP13.56□□□□□ -0.24
AC055717.1-201ENST00000502221 UQCRHLA0A096LP55 91 aa13.55□□□□□ -0.24
AC055717.1-201ENST00000502221 UQCRHP07919 91 aa13.55□□□□□ -0.24
AC055717.1-201ENST00000502221 TNNT2P45379 298 aaPredicted RBP13.55□□□□□ -0.24
AC055717.1-201ENST00000502221 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
AC055717.1-201ENST00000502221 ALDH1L2Q3SY69 923 aa13.55□□□□□ -0.24
AC055717.1-201ENST00000502221 SMC4Q9NTJ3 1288 aa13.55□□□□□ -0.24
AC055717.1-201ENST00000502221 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
AC055717.1-201ENST00000502221 FAM13BQ9NYF5 915 aa13.54□□□□□ -0.24
AC055717.1-201ENST00000502221 TRIM27P14373 513 aa13.54□□□□□ -0.24
AC055717.1-201ENST00000502221 RBM6P78332 1123 aaKnown RBP13.54□□□□□ -0.24
AC055717.1-201ENST00000502221 HMGN5P82970 282 aaKnown RBP13.54□□□□□ -0.24
AC055717.1-201ENST00000502221 KIF2CQ99661 725 aa13.54□□□□□ -0.24
AC055717.1-201ENST00000502221 USP21Q9UK80 565 aa13.54□□□□□ -0.24
AC055717.1-201ENST00000502221 TRPM3Q9HCF6 1732 aaPredicted RBP13.54□□□□□ -0.24
AC055717.1-201ENST00000502221 MINK1Q8N4C8 1332 aaPredicted RBP13.54□□□□□ -0.24
AC055717.1-201ENST00000502221 ATRNO75882 1429 aa13.53□□□□□ -0.24
AC055717.1-201ENST00000502221 BCL9LQ86UU0 1499 aa13.53□□□□□ -0.24
AC055717.1-201ENST00000502221 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.53□□□□□ -0.24
AC055717.1-201ENST00000502221 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
AC055717.1-201ENST00000502221 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
AC055717.1-201ENST00000502221 ZSCAN23Q3MJ62 389 aa13.52□□□□□ -0.24
AC055717.1-201ENST00000502221 PRIMPOLQ96LW4 560 aa13.52□□□□□ -0.24
AC055717.1-201ENST00000502221 CCDC94Q9BW85 323 aaPredicted RBP13.52□□□□□ -0.24
AC055717.1-201ENST00000502221 PLCH1Q4KWH8 1693 aa13.52□□□□□ -0.25
AC055717.1-201ENST00000502221 MBD3O95983 291 aa13.52□□□□□ -0.25
AC055717.1-201ENST00000502221 NEUROD2Q15784 382 aa13.52□□□□□ -0.25
AC055717.1-201ENST00000502221 KRT28Q7Z3Y7 464 aa13.52□□□□□ -0.25
AC055717.1-201ENST00000502221 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
AC055717.1-201ENST00000502221 CDC45O75419 566 aa13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 SSFA2P28290 1259 aa13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 GTPBP4Q9BZE4 634 aaKnown RBP13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 TNNQ9UQP3 1299 aa13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 NSD3Q9BZ95 1437 aa13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 CYP2E1P05181 493 aaPredicted RBP13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 BCL2L13Q9BXK5 485 aa13.51□□□□□ -0.25
AC055717.1-201ENST00000502221 TNS3Q68CZ2 1445 aa13.5□□□□□ -0.25
AC055717.1-201ENST00000502221 GLI3P10071 1580 aa13.5□□□□□ -0.25
AC055717.1-201ENST00000502221 LRSAM1Q6UWE0 723 aa13.5□□□□□ -0.25
AC055717.1-201ENST00000502221 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
AC055717.1-201ENST00000502221 ALS2Q96Q42 1657 aa13.5□□□□□ -0.25
AC055717.1-201ENST00000502221 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
AC055717.1-201ENST00000502221 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
AC055717.1-201ENST00000502221 DMTNQ08495 405 aa13.49□□□□□ -0.25
AC055717.1-201ENST00000502221 CABLES1Q8TDN4 633 aa13.49□□□□□ -0.25
AC055717.1-201ENST00000502221 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
AC055717.1-201ENST00000502221 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
AC055717.1-201ENST00000502221 CRYBG1Q9Y4K1 1723 aa13.49□□□□□ -0.25
AC055717.1-201ENST00000502221 SLIT2O94813 1529 aa13.49□□□□□ -0.25
AC055717.1-201ENST00000502221 TULP4Q9NRJ4 1543 aa13.49□□□□□ -0.25
AC055717.1-201ENST00000502221 ANKARQ7Z5J8 1434 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms