RNA–Protein interactions for RNA: ENST00000500085.2

FAT1-202, Transcript of FAT atypical cadherin 1, humanhuman

TSL 2

Gene FAT1, Length 2,224 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAT1-202ENST00000500085 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
FAT1-202ENST00000500085 ZNF142P52746 1687 aaPredicted RBP16.25■□□□□ 0.19
FAT1-202ENST00000500085 HOXC9P31274 260 aa16.25■□□□□ 0.19
FAT1-202ENST00000500085 SIRT2Q8IXJ6 389 aa16.25■□□□□ 0.19
FAT1-202ENST00000500085 RTF1Q92541 710 aaKnown RBP16.25■□□□□ 0.19
FAT1-202ENST00000500085 RBM33Q96EV2 1170 aaKnown RBP16.25■□□□□ 0.19
FAT1-202ENST00000500085 USP54Q70EL1 1684 aa16.24■□□□□ 0.19
FAT1-202ENST00000500085 MIS18AQ9NYP9 233 aa16.24■□□□□ 0.19
FAT1-202ENST00000500085 GCC1Q96CN9 775 aa16.23■□□□□ 0.19
FAT1-202ENST00000500085 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
FAT1-202ENST00000500085 KIF24Q5T7B8 1368 aa16.23■□□□□ 0.19
FAT1-202ENST00000500085 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
FAT1-202ENST00000500085 RGS12O14924 1447 aa16.23■□□□□ 0.19
FAT1-202ENST00000500085 ANKRD45Q5TZF3 282 aa16.22■□□□□ 0.19
FAT1-202ENST00000500085 INTS3Q68E01 1043 aaKnown RBP16.22■□□□□ 0.19
FAT1-202ENST00000500085 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
FAT1-202ENST00000500085 TSPYL4Q9UJ04 414 aa16.21■□□□□ 0.19
FAT1-202ENST00000500085 BECN1Q14457 450 aa16.21■□□□□ 0.18
FAT1-202ENST00000500085 NWD1Q149M9 1564 aa16.2■□□□□ 0.18
FAT1-202ENST00000500085 ADAMTSL3P82987 1691 aa16.2■□□□□ 0.18
FAT1-202ENST00000500085 PTPRCP08575 1304 aa16.19■□□□□ 0.18
FAT1-202ENST00000500085 MFAP1P55081 439 aaKnown RBP16.19■□□□□ 0.18
FAT1-202ENST00000500085 NFKBIBQ15653 356 aa16.19■□□□□ 0.18
FAT1-202ENST00000500085 LTV1Q96GA3 475 aaPredicted RBP16.19■□□□□ 0.18
FAT1-202ENST00000500085 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
FAT1-202ENST00000500085 SETD1BQ9UPS6 1966 aaKnown RBP16.18■□□□□ 0.18
FAT1-202ENST00000500085 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
FAT1-202ENST00000500085 HTATSF1O43719 755 aaKnown RBP16.18■□□□□ 0.18
FAT1-202ENST00000500085 C22orf23Q9BZE7 217 aa16.18■□□□□ 0.18
FAT1-202ENST00000500085 LTN1O94822 1766 aa16.18■□□□□ 0.18
FAT1-202ENST00000500085 GNAT3A8MTJ3 354 aa16.17■□□□□ 0.18
FAT1-202ENST00000500085 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
FAT1-202ENST00000500085 LRRC37A3O60309 1634 aa16.17■□□□□ 0.18
FAT1-202ENST00000500085 BMP2KLQ5H9B9 411 aa16.17■□□□□ 0.18
FAT1-202ENST00000500085 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
FAT1-202ENST00000500085 MSH6P52701 1360 aa16.16■□□□□ 0.18
FAT1-202ENST00000500085 PSME1Q06323 249 aa16.15■□□□□ 0.18
FAT1-202ENST00000500085 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
FAT1-202ENST00000500085 G2E3Q7L622 706 aa16.15■□□□□ 0.18
FAT1-202ENST00000500085 USHBP1Q8N6Y0 703 aa16.15■□□□□ 0.18
FAT1-202ENST00000500085 NFAT5O94916 1531 aa16.15■□□□□ 0.18
FAT1-202ENST00000500085 MAP3K5Q99683 1374 aa16.14■□□□□ 0.17
FAT1-202ENST00000500085 TBC1D2Q9BYX2 928 aa16.14■□□□□ 0.17
FAT1-202ENST00000500085 DCTPP1Q9H773 170 aa16.14■□□□□ 0.17
FAT1-202ENST00000500085 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.17
FAT1-202ENST00000500085 ANKRD44Q8N8A2 993 aa16.14■□□□□ 0.17
FAT1-202ENST00000500085 IP6K1Q92551 441 aa16.14■□□□□ 0.17
FAT1-202ENST00000500085 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
FAT1-202ENST00000500085 MEIS3Q99687 375 aa16.13■□□□□ 0.17
FAT1-202ENST00000500085 CEP85Q6P2H3 762 aa16.13■□□□□ 0.17
FAT1-202ENST00000500085 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
FAT1-202ENST00000500085 SLKQ9H2G2 1235 aaPredicted RBP16.12■□□□□ 0.17
FAT1-202ENST00000500085 F6X3S4 739 aa16.11■□□□□ 0.17
FAT1-202ENST00000500085 SLC4A10Q6U841 1118 aa16.11■□□□□ 0.17
FAT1-202ENST00000500085 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
FAT1-202ENST00000500085 FRAT2O75474 233 aaPredicted RBP16.1■□□□□ 0.17
FAT1-202ENST00000500085 TAF7Q15545 349 aaPredicted RBP16.1■□□□□ 0.17
FAT1-202ENST00000500085 NBPF6Q5VWK0 638 aa16.1■□□□□ 0.17
FAT1-202ENST00000500085 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
FAT1-202ENST00000500085 NBPF4Q96M43 638 aa16.1■□□□□ 0.17
FAT1-202ENST00000500085 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
FAT1-202ENST00000500085 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
FAT1-202ENST00000500085 FAM208AQ9UK61 1670 aaKnown RBP16.1■□□□□ 0.17
FAT1-202ENST00000500085 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
FAT1-202ENST00000500085 CCT4P50991 539 aaKnown RBP16.09■□□□□ 0.17
FAT1-202ENST00000500085 XPCQ01831 940 aaPredicted RBP16.09■□□□□ 0.17
FAT1-202ENST00000500085 PLEKHM2Q8IWE5 1019 aa16.09■□□□□ 0.17
FAT1-202ENST00000500085 NECTIN2Q92692 538 aa16.09■□□□□ 0.17
FAT1-202ENST00000500085 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
FAT1-202ENST00000500085 RBM25P49756 843 aaKnown RBP16.08■□□□□ 0.16
FAT1-202ENST00000500085 BCL11AQ9H165 835 aa16.08■□□□□ 0.16
FAT1-202ENST00000500085 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.16
FAT1-202ENST00000500085 FLIIQ13045 1269 aa16.07■□□□□ 0.16
FAT1-202ENST00000500085 TBC1D9Q6ZT07 1266 aa16.07■□□□□ 0.16
FAT1-202ENST00000500085 RGPD2P0DJD1 1756 aa16.07■□□□□ 0.16
FAT1-202ENST00000500085 PHRF1Q9P1Y6 1649 aaKnown RBP16.07■□□□□ 0.16
FAT1-202ENST00000500085 GSPT1P15170 499 aaKnown RBP16.07■□□□□ 0.16
FAT1-202ENST00000500085 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
FAT1-202ENST00000500085 FKBP5Q13451 457 aaPredicted RBP16.06■□□□□ 0.16
FAT1-202ENST00000500085 CEMIPQ8WUJ3 1361 aa16.06■□□□□ 0.16
FAT1-202ENST00000500085 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
FAT1-202ENST00000500085 PLEKHG5O94827 1062 aa16.06■□□□□ 0.16
FAT1-202ENST00000500085 LRRC59Q96AG4 307 aaKnown RBP16.06■□□□□ 0.16
FAT1-202ENST00000500085 CACNA1FO60840 1977 aa16.05■□□□□ 0.16
FAT1-202ENST00000500085 GCP02774 474 aa16.05■□□□□ 0.16
FAT1-202ENST00000500085 APBB1O00213 710 aa16.04■□□□□ 0.16
FAT1-202ENST00000500085 SPRYD3Q8NCJ5 442 aa16.04■□□□□ 0.16
FAT1-202ENST00000500085 TTC22Q5TAA0 569 aa16.04■□□□□ 0.16
FAT1-202ENST00000500085 LMOD2Q6P5Q4 547 aa16.04■□□□□ 0.16
FAT1-202ENST00000500085 OTUD7AQ8TE49 926 aaPredicted RBP16.04■□□□□ 0.16
FAT1-202ENST00000500085 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
FAT1-202ENST00000500085 SMARCA5O60264 1052 aaPredicted RBP16.03■□□□□ 0.16
FAT1-202ENST00000500085 HMMRO75330 724 aa16.03■□□□□ 0.16
FAT1-202ENST00000500085 CDC45O75419 566 aa16.03■□□□□ 0.16
FAT1-202ENST00000500085 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
FAT1-202ENST00000500085 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
FAT1-202ENST00000500085 SLIT3O75094 1523 aa16.03■□□□□ 0.16
FAT1-202ENST00000500085 MED1Q15648 1581 aaPredicted RBP16.02■□□□□ 0.16
FAT1-202ENST00000500085 GNAI2P04899 355 aa16.02■□□□□ 0.16
FAT1-202ENST00000500085 HDGFL1Q5TGJ6 251 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms