RNA–Protein interactions for RNA: ENST00000498414.5

RPP21-229, Transcript of ribonuclease P/MRP subunit p21, human

TSL 5

Gene RPP21, Length 1,492 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP21-229	ENST00000498414	ZCRB1	Q8TBF4	217 aa	Known RBP	32.34	■■■□□ 2.77
RPP21-229	ENST00000498414	DDX54	Q8TDD1	881 aa	Known RBP	32.3	■■■□□ 2.76
RPP21-229	ENST00000498414	COL3A1	P02461	1466 aa	Predicted RBP	32.3	■■■□□ 2.76
RPP21-229	ENST00000498414	IL13	P35225	146 aa		32.29	■■■□□ 2.76
RPP21-229	ENST00000498414	DDX10	Q13206	875 aa	Known RBP	32.29	■■■□□ 2.76
RPP21-229	ENST00000498414	DOT1L	Q8TEK3	1739 aa		32.29	■■■□□ 2.76
RPP21-229	ENST00000498414	KAT6B	Q8WYB5	2073 aa		32.28	■■■□□ 2.76
RPP21-229	ENST00000498414	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.28	■■■□□ 2.76
RPP21-229	ENST00000498414	RGPD4	Q7Z3J3	1758 aa		32.28	■■■□□ 2.76
RPP21-229	ENST00000498414	APBA3	O96018	575 aa		32.27	■■■□□ 2.76
RPP21-229	ENST00000498414	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.26	■■■□□ 2.75
RPP21-229	ENST00000498414	RREB1	Q92766	1687 aa		32.25	■■■□□ 2.75
RPP21-229	ENST00000498414	PLEKHG2	Q9H7P9	1386 aa		32.25	■■■□□ 2.75
RPP21-229	ENST00000498414	EN1	Q05925	392 aa	Predicted RBP	32.25	■■■□□ 2.75
RPP21-229	ENST00000498414	PTF1A	Q7RTS3	328 aa		32.25	■■■□□ 2.75
RPP21-229	ENST00000498414	PCDH11X	Q9BZA7	1347 aa		32.25	■■■□□ 2.75
RPP21-229	ENST00000498414	PCDH11Y	Q9BZA8	1340 aa		32.25	■■■□□ 2.75
RPP21-229	ENST00000498414	PARD3	Q8TEW0	1356 aa		32.24	■■■□□ 2.75
RPP21-229	ENST00000498414	BTAF1	O14981	1849 aa		32.24	■■■□□ 2.75
RPP21-229	ENST00000498414	PPP2R1A	P30153	589 aa		32.23	■■■□□ 2.75
RPP21-229	ENST00000498414	ACSBG1	Q96GR2	724 aa		32.22	■■■□□ 2.75
RPP21-229	ENST00000498414	KDR	P35968	1356 aa		32.21	■■■□□ 2.75
RPP21-229	ENST00000498414	DIAPH1	O60610	1272 aa	Known RBP	32.21	■■■□□ 2.75
RPP21-229	ENST00000498414	CAMKK2	Q96RR4	588 aa		32.21	■■■□□ 2.75
RPP21-229	ENST00000498414	KCNQ2	O43526	872 aa		32.2	■■■□□ 2.75
RPP21-229	ENST00000498414	AEBP1	Q8IUX7	1158 aa		32.2	■■■□□ 2.75
RPP21-229	ENST00000498414	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.2	■■■□□ 2.75
RPP21-229	ENST00000498414	SPG7	Q9UQ90	795 aa		32.19	■■■□□ 2.74
RPP21-229	ENST00000498414	NUP188	Q5SRE5	1749 aa		32.19	■■■□□ 2.74
RPP21-229	ENST00000498414	CYP27B1	O15528	508 aa		32.18	■■■□□ 2.74
RPP21-229	ENST00000498414	EZH2	Q15910	746 aa	Known RBP	32.18	■■■□□ 2.74
RPP21-229	ENST00000498414	TOGARAM1	Q9Y4F4	1720 aa		32.18	■■■□□ 2.74
RPP21-229	ENST00000498414	SULT6B1	Q6IMI4	303 aa		32.17	■■■□□ 2.74
RPP21-229	ENST00000498414	PLSCR1	O15162	318 aa		32.14	■■■□□ 2.74
RPP21-229	ENST00000498414	CFAP53	Q96M91	514 aa		32.14	■■■□□ 2.74
RPP21-229	ENST00000498414	ITGB4	P16144	1822 aa		32.13	■■■□□ 2.73
RPP21-229	ENST00000498414	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.11	■■■□□ 2.73
RPP21-229	ENST00000498414	HMOX1	P09601	288 aa		32.09	■■■□□ 2.73
RPP21-229	ENST00000498414	PHKG2	P15735	406 aa		32.09	■■■□□ 2.73
RPP21-229	ENST00000498414	PRIM1	P49642	420 aa	Known RBP	32.09	■■■□□ 2.73
RPP21-229	ENST00000498414	NKX1-1	Q15270	411 aa	Predicted RBP	32.09	■■■□□ 2.73
RPP21-229	ENST00000498414	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.09	■■■□□ 2.73
RPP21-229	ENST00000498414	RALBP1	Q15311	655 aa		32.08	■■■□□ 2.73
RPP21-229	ENST00000498414	AMOT	Q4VCS5	1084 aa		32.08	■■■□□ 2.73
RPP21-229	ENST00000498414	IFNL2	Q8IZJ0	200 aa		32.08	■■■□□ 2.73
RPP21-229	ENST00000498414	U2SURP	O15042	1029 aa	Known RBP	32.06	■■■□□ 2.72
RPP21-229	ENST00000498414	SYTL4	Q96C24	671 aa	Predicted RBP	32.06	■■■□□ 2.72
RPP21-229	ENST00000498414	LY75	O60449	1722 aa		32.03	■■■□□ 2.72
RPP21-229	ENST00000498414	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.03	■■■□□ 2.72
RPP21-229	ENST00000498414	PROM2	Q8N271	834 aa		32.01	■■■□□ 2.71
RPP21-229	ENST00000498414	NUDC	Q9Y266	331 aa		32.01	■■■□□ 2.71
RPP21-229	ENST00000498414	VIRMA	Q69YN4	1812 aa	Known RBP	31.99	■■■□□ 2.71
RPP21-229	ENST00000498414	TXNRD1	Q16881	649 aa		31.99	■■■□□ 2.71
RPP21-229	ENST00000498414	SCN11A	Q9UI33	1791 aa		31.98	■■■□□ 2.71
RPP21-229	ENST00000498414	MYBBP1A	Q9BQG0	1328 aa	Known RBP	31.97	■■■□□ 2.71
RPP21-229	ENST00000498414	KDM6A	O15550	1401 aa	Predicted RBP	31.97	■■■□□ 2.71
RPP21-229	ENST00000498414	HSP90AB1	P08238	724 aa	Known RBP	31.97	■■■□□ 2.71
RPP21-229	ENST00000498414	PAPPA	Q13219	1627 aa		31.96	■■■□□ 2.71
RPP21-229	ENST00000498414	C1orf141	Q5JVX7	400 aa		31.96	■■■□□ 2.71
RPP21-229	ENST00000498414	MPRIP	Q6WCQ1	1025 aa		31.95	■■■□□ 2.7
RPP21-229	ENST00000498414	DCAF5	Q96JK2	942 aa		31.94	■■■□□ 2.7
RPP21-229	ENST00000498414	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.93	■■■□□ 2.7
RPP21-229	ENST00000498414	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.93	■■■□□ 2.7
RPP21-229	ENST00000498414	RSPH6A	Q9H0K4	717 aa		31.93	■■■□□ 2.7
RPP21-229	ENST00000498414	PRKRIP1	Q9H875	184 aa	Predicted RBP	31.93	■■■□□ 2.7
RPP21-229	ENST00000498414	NBPF14	Q5TI25	921 aa		31.92	■■■□□ 2.7
RPP21-229	ENST00000498414	ADAMTS7	Q9UKP4	1686 aa		31.92	■■■□□ 2.7
RPP21-229	ENST00000498414	PSD	A5PKW4	1024 aa	Predicted RBP	31.91	■■■□□ 2.7
RPP21-229	ENST00000498414	MTHFSD	Q2M296	383 aa	Known RBP	31.91	■■■□□ 2.7
RPP21-229	ENST00000498414	AKAP4	Q5JQC9	854 aa		31.91	■■■□□ 2.7
RPP21-229	ENST00000498414	PIGB	Q92521	554 aa		31.91	■■■□□ 2.7
RPP21-229	ENST00000498414	TMOD3	Q9NYL9	352 aa		31.91	■■■□□ 2.7
RPP21-229	ENST00000498414	PRKAR2B	P31323	418 aa		31.9	■■■□□ 2.7
RPP21-229	ENST00000498414	R3HDM1	Q15032	1099 aa	Known RBP	31.9	■■■□□ 2.7
RPP21-229	ENST00000498414	ERVV-2	B6SEH9	535 aa		31.89	■■■□□ 2.7
RPP21-229	ENST00000498414	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.89	■■■□□ 2.7
RPP21-229	ENST00000498414	SLC27A3	Q5K4L6	730 aa		31.87	■■■□□ 2.69
RPP21-229	ENST00000498414	LRRC4B	Q9NT99	713 aa		31.87	■■■□□ 2.69
RPP21-229	ENST00000498414	PALLD	Q8WX93	1383 aa		31.87	■■■□□ 2.69
RPP21-229	ENST00000498414	FCHSD2	O94868	740 aa		31.86	■■■□□ 2.69
RPP21-229	ENST00000498414	TAF1L	Q8IZX4	1826 aa		31.85	■■■□□ 2.69
RPP21-229	ENST00000498414	GAS2L2	Q8NHY3	880 aa		31.84	■■■□□ 2.69
RPP21-229	ENST00000498414	SMARCC1	Q92922	1105 aa	Predicted RBP	31.84	■■■□□ 2.69
RPP21-229	ENST00000498414	C5	P01031	1676 aa		31.84	■■■□□ 2.69
RPP21-229	ENST00000498414	MRC1	P22897	1456 aa		31.84	■■■□□ 2.69
RPP21-229	ENST00000498414	PHACTR3	Q96KR7	559 aa		31.84	■■■□□ 2.69
RPP21-229	ENST00000498414	CCNL1	Q9UK58	526 aa	Predicted RBP	31.82	■■■□□ 2.68
RPP21-229	ENST00000498414	MAP3K5	Q99683	1374 aa		31.81	■■■□□ 2.68
RPP21-229	ENST00000498414	CABP4	P57796	275 aa		31.81	■■■□□ 2.68
RPP21-229	ENST00000498414	KCNQ4	P56696	695 aa		31.8	■■■□□ 2.68
RPP21-229	ENST00000498414	STK32B	Q9NY57	414 aa		31.8	■■■□□ 2.68
RPP21-229	ENST00000498414	CASZ1	Q86V15	1759 aa		31.8	■■■□□ 2.68
RPP21-229	ENST00000498414	TUBGCP6	Q96RT7	1819 aa		31.8	■■■□□ 2.68
RPP21-229	ENST00000498414	RNMT	O43148	476 aa	Known RBP	31.79	■■■□□ 2.68
RPP21-229	ENST00000498414	LGR6	Q9HBX8	967 aa		31.79	■■■□□ 2.68
RPP21-229	ENST00000498414	ASAP1	Q9ULH1	1129 aa		31.79	■■■□□ 2.68
RPP21-229	ENST00000498414	QSER1	Q2KHR3	1735 aa		31.79	■■■□□ 2.68
RPP21-229	ENST00000498414	SLC15A2	Q16348	729 aa		31.78	■■■□□ 2.68
RPP21-229	ENST00000498414	ATG3	Q9NT62	314 aa		31.78	■■■□□ 2.68
RPP21-229	ENST00000498414	ZNF831	Q5JPB2	1677 aa		31.77	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms