RNA–Protein interactions for RNA: ENST00000497403.5

GRHL1-208, Transcript of grainyhead like transcription factor 1, human

TSL 2

Gene GRHL1, Length 5,400 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRHL1-208	ENST00000497403	RAB11FIP3	O75154	756 aa		13.68	□□□□□ -0.22
GRHL1-208	ENST00000497403	IL16	Q14005	1332 aa		13.68	□□□□□ -0.22
GRHL1-208	ENST00000497403	MYL6B	P14649	208 aa		13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	TMPO	P42166	694 aa	Known RBP	13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	IK	Q13123	557 aa	Predicted RBP	13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	SNRPA1	P09661	255 aa	Known RBP	13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	PPP4R3B	Q5MIZ7	849 aa		13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	NBR1	Q14596	966 aa		13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	TPRN	Q4KMQ1	711 aa		13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	ATF7IP	Q6VMQ6	1270 aa		13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	ANKRD20A12P	Q8NF67	263 aa		13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	PIK3R4	Q99570	1358 aa		13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	NPAT	Q14207	1427 aa		13.67	□□□□□ -0.22
GRHL1-208	ENST00000497403	NPHP4	O75161	1426 aa	Predicted RBP	13.66	□□□□□ -0.22
GRHL1-208	ENST00000497403	RBM5	P52756	815 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
GRHL1-208	ENST00000497403	HSPA2	P54652	639 aa		13.66	□□□□□ -0.22
GRHL1-208	ENST00000497403	MPRIP	Q6WCQ1	1025 aa		13.66	□□□□□ -0.22
GRHL1-208	ENST00000497403	PRAG1	Q86YV5	1406 aa		13.66	□□□□□ -0.22
GRHL1-208	ENST00000497403	CRBN	Q96SW2	442 aa		13.66	□□□□□ -0.22
GRHL1-208	ENST00000497403	STK32B	Q9NY57	414 aa		13.66	□□□□□ -0.22
GRHL1-208	ENST00000497403	PTPRC	P08575	1304 aa		13.66	□□□□□ -0.22
GRHL1-208	ENST00000497403	PLEKHG1	Q9ULL1	1385 aa		13.66	□□□□□ -0.22
GRHL1-208	ENST00000497403	SLC5A1	P13866	664 aa		13.65	□□□□□ -0.22
GRHL1-208	ENST00000497403	AKAP4	Q5JQC9	854 aa		13.65	□□□□□ -0.22
GRHL1-208	ENST00000497403	MCM2	P49736	904 aa		13.65	□□□□□ -0.22
GRHL1-208	ENST00000497403	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.65	□□□□□ -0.22
GRHL1-208	ENST00000497403	LRRCC1	Q9C099	1032 aa		13.65	□□□□□ -0.22
GRHL1-208	ENST00000497403	ANKRD18B	A2A2Z9	1011 aa		13.65	□□□□□ -0.23
GRHL1-208	ENST00000497403	LDHC	P07864	332 aa		13.65	□□□□□ -0.23
GRHL1-208	ENST00000497403	TPD52L1	Q16890	204 aa	Predicted RBP	13.65	□□□□□ -0.23
GRHL1-208	ENST00000497403	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.65	□□□□□ -0.23
GRHL1-208	ENST00000497403	DDX46	Q7L014	1031 aa	Known RBP	13.65	□□□□□ -0.23
GRHL1-208	ENST00000497403	EFCAB6	Q5THR3	1501 aa		13.64	□□□□□ -0.23
GRHL1-208	ENST00000497403	TPM1	P09493	284 aa		13.64	□□□□□ -0.23
GRHL1-208	ENST00000497403	ZNF772	Q68DY9	489 aa	Predicted RBP	13.64	□□□□□ -0.23
GRHL1-208	ENST00000497403	YEATS2	Q9ULM3	1422 aa		13.64	□□□□□ -0.23
GRHL1-208	ENST00000497403	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.64	□□□□□ -0.23
GRHL1-208	ENST00000497403	TSR1	Q2NL82	804 aa	Known RBP	13.64	□□□□□ -0.23
GRHL1-208	ENST00000497403	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.64	□□□□□ -0.23
GRHL1-208	ENST00000497403	PDIA4	P13667	645 aa	Known RBP	13.63	□□□□□ -0.23
GRHL1-208	ENST00000497403	ANKRD1	Q15327	319 aa		13.63	□□□□□ -0.23
GRHL1-208	ENST00000497403	DUSP27	Q5VZP5	1158 aa		13.63	□□□□□ -0.23
GRHL1-208	ENST00000497403	ASXL1	Q8IXJ9	1541 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	DDX11L8	A8MPP1	907 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	NCBP3	Q53F19	620 aa	Known RBP	13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	BICDL1	Q6ZP65	573 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	KDM5C	P41229	1560 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	FYB1	O15117	783 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	IFIT5	Q13325	482 aa	Known RBP	13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	PLXNC1	O60486	1568 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	BAG6	P46379	1132 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	GSTO1	P78417	241 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	IL27	Q8NEV9	243 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	FLAD1	Q8NFF5	587 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	PARP3	Q9Y6F1	533 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	PREX2	Q70Z35	1606 aa		13.62	□□□□□ -0.23
GRHL1-208	ENST00000497403	DNAJC2	Q99543	621 aa	Known RBP	13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	TRMT112	Q9UI30	125 aa	Known RBP	13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	HDAC9	Q9UKV0	1011 aa		13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	MYO1B	O43795	1136 aa		13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	ZGPAT	Q8N5A5	531 aa	Known RBP	13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	TPM3	P06753	285 aa		13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	METTL24	Q5JXM2	366 aa		13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	BABAM1	Q9NWV8	329 aa		13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	EDC4	Q6P2E9	1401 aa	Known RBP	13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	ANKIB1	Q9P2G1	1089 aa		13.61	□□□□□ -0.23
GRHL1-208	ENST00000497403	CCDC152	Q4G0S7	254 aa		13.6	□□□□□ -0.23
GRHL1-208	ENST00000497403	NOB1	Q9ULX3	412 aa	Known RBP	13.6	□□□□□ -0.23
GRHL1-208	ENST00000497403	DCAF5	Q96JK2	942 aa		13.6	□□□□□ -0.23
GRHL1-208	ENST00000497403	SLAIN2	Q9P270	581 aa		13.6	□□□□□ -0.23
GRHL1-208	ENST00000497403	PTCD1	O75127	700 aa	Known RBP	13.6	□□□□□ -0.23
GRHL1-208	ENST00000497403	KRT32	Q14532	448 aa		13.6	□□□□□ -0.23
GRHL1-208	ENST00000497403	CWC25	Q9NXE8	425 aa	Predicted RBP	13.6	□□□□□ -0.23
GRHL1-208	ENST00000497403	SAMD9L	Q8IVG5	1584 aa		13.6	□□□□□ -0.23
GRHL1-208	ENST00000497403	UGGT1	Q9NYU2	1555 aa		13.6	□□□□□ -0.23
GRHL1-208	ENST00000497403	CDKL5	O76039	1030 aa		13.59	□□□□□ -0.23
GRHL1-208	ENST00000497403	RAI14	Q9P0K7	980 aa		13.59	□□□□□ -0.23
GRHL1-208	ENST00000497403	TTF1	Q15361	905 aa	Predicted RBP	13.59	□□□□□ -0.23
GRHL1-208	ENST00000497403	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.59	□□□□□ -0.23
GRHL1-208	ENST00000497403	RTCB	Q9Y3I0	505 aa	Known RBP	13.59	□□□□□ -0.23
GRHL1-208	ENST00000497403	IP6K1	Q92551	441 aa		13.59	□□□□□ -0.23
GRHL1-208	ENST00000497403	SETDB2	Q96T68	719 aa		13.59	□□□□□ -0.23
GRHL1-208	ENST00000497403	MPHOSPH6	Q99547	160 aa	Known RBP	13.59	□□□□□ -0.23
GRHL1-208	ENST00000497403	PTPRK	Q15262	1439 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	LRP2BP	Q9P2M1	347 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	TRAF1	Q13077	416 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	SOGA3	Q5TF21	947 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	MCTP1	Q6DN14	999 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	DNAAF4	Q8WXU2	420 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	EHMT1	Q9H9B1	1298 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	SMC3	Q9UQE7	1217 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	EMILIN1	Q9Y6C2	1016 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	SHROOM2	Q13796	1616 aa		13.58	□□□□□ -0.24
GRHL1-208	ENST00000497403	PDC	P20941	246 aa		13.57	□□□□□ -0.24
GRHL1-208	ENST00000497403	ATP6V1A	P38606	617 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 140 ms