RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 EID1Q9Y6B2 187 aa18.3■□□□□ 0.52
GCOM1-212ENST00000496627 TTC21AQ8NDW8 1320 aa18.3■□□□□ 0.52
GCOM1-212ENST00000496627 RIMS1Q86UR5 1692 aaKnown RBP18.3■□□□□ 0.52
GCOM1-212ENST00000496627 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
GCOM1-212ENST00000496627 PLEKHM2Q8IWE5 1019 aa18.3■□□□□ 0.52
GCOM1-212ENST00000496627 DDX11L8A8MPP1 907 aa18.29■□□□□ 0.52
GCOM1-212ENST00000496627 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
GCOM1-212ENST00000496627 KIF2CQ99661 725 aa18.29■□□□□ 0.52
GCOM1-212ENST00000496627 RPAP2Q8IXW5 612 aaPredicted RBP18.29■□□□□ 0.52
GCOM1-212ENST00000496627 CRB1P82279 1406 aa18.29■□□□□ 0.52
GCOM1-212ENST00000496627 SSH2Q76I76 1423 aa18.29■□□□□ 0.52
GCOM1-212ENST00000496627 RGPD8O14715 1765 aaPredicted RBP18.28■□□□□ 0.52
GCOM1-212ENST00000496627 HSP90AA1P07900 732 aaKnown RBP18.28■□□□□ 0.52
GCOM1-212ENST00000496627 DDIT3P35638 169 aa18.28■□□□□ 0.52
GCOM1-212ENST00000496627 MAP3K19Q56UN5 1328 aa18.28■□□□□ 0.52
GCOM1-212ENST00000496627 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
GCOM1-212ENST00000496627 CEP85Q6P2H3 762 aa18.28■□□□□ 0.52
GCOM1-212ENST00000496627 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
GCOM1-212ENST00000496627 FLT4P35916 1363 aa18.27■□□□□ 0.52
GCOM1-212ENST00000496627 TRAK2O60296 914 aa18.27■□□□□ 0.52
GCOM1-212ENST00000496627 TTC22Q5TAA0 569 aa18.27■□□□□ 0.52
GCOM1-212ENST00000496627 SBNO1A3KN83 1393 aa18.27■□□□□ 0.52
GCOM1-212ENST00000496627 RTL1A6NKG5 1358 aa18.27■□□□□ 0.52
GCOM1-212ENST00000496627 GZF1Q9H116 711 aaPredicted RBP18.27■□□□□ 0.52
GCOM1-212ENST00000496627 AMOTL2Q9Y2J4 779 aa18.27■□□□□ 0.52
GCOM1-212ENST00000496627 TSPYL4Q9UJ04 414 aa18.26■□□□□ 0.51
GCOM1-212ENST00000496627 GOLGA6L3A6NEY3 463 aa18.26■□□□□ 0.51
GCOM1-212ENST00000496627 K7ELQ4 463 aaPredicted RBP18.26■□□□□ 0.51
GCOM1-212ENST00000496627 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
GCOM1-212ENST00000496627 NGDNQ8NEJ9 315 aaKnown RBP18.26■□□□□ 0.51
GCOM1-212ENST00000496627 DIP2AQ14689 1571 aa18.26■□□□□ 0.51
GCOM1-212ENST00000496627 MEIS3Q99687 375 aa18.25■□□□□ 0.51
GCOM1-212ENST00000496627 CEBPAP49715 358 aaPredicted RBP18.25■□□□□ 0.51
GCOM1-212ENST00000496627 MTHFSDQ2M296 383 aaKnown RBP18.25■□□□□ 0.51
GCOM1-212ENST00000496627 ARXQ96QS3 562 aa18.25■□□□□ 0.51
GCOM1-212ENST00000496627 MIS18AQ9NYP9 233 aa18.25■□□□□ 0.51
GCOM1-212ENST00000496627 FOXO3O43524 673 aa18.24■□□□□ 0.51
GCOM1-212ENST00000496627 CD2BP2O95400 341 aaKnown RBP18.24■□□□□ 0.51
GCOM1-212ENST00000496627 AMPHP49418 695 aa18.24■□□□□ 0.51
GCOM1-212ENST00000496627 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
GCOM1-212ENST00000496627 TNPO1Q92973 898 aaKnown RBP18.24■□□□□ 0.51
GCOM1-212ENST00000496627 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
GCOM1-212ENST00000496627 PIK3C2AO00443 1686 aa18.23■□□□□ 0.51
GCOM1-212ENST00000496627 APBB1O00213 710 aa18.23■□□□□ 0.51
GCOM1-212ENST00000496627 GBP4Q96PP9 640 aa18.23■□□□□ 0.51
GCOM1-212ENST00000496627 SLIT1O75093 1534 aa18.23■□□□□ 0.51
GCOM1-212ENST00000496627 GAS2L2Q8NHY3 880 aa18.23■□□□□ 0.51
GCOM1-212ENST00000496627 FOXD4L1Q9NU39 408 aa18.23■□□□□ 0.51
GCOM1-212ENST00000496627 KDRP35968 1356 aa18.23■□□□□ 0.51
GCOM1-212ENST00000496627 CEP170BQ9Y4F5 1589 aaPredicted RBP18.22■□□□□ 0.51
GCOM1-212ENST00000496627 ARHGAP23Q9P227 1491 aa18.22■□□□□ 0.51
GCOM1-212ENST00000496627 HMMRO75330 724 aa18.22■□□□□ 0.51
GCOM1-212ENST00000496627 RAB3GAP1Q15042 981 aa18.22■□□□□ 0.51
GCOM1-212ENST00000496627 SMARCA5O60264 1052 aaPredicted RBP18.21■□□□□ 0.51
GCOM1-212ENST00000496627 CASC1Q6TDU7 716 aa18.21■□□□□ 0.51
GCOM1-212ENST00000496627 SLC4A10Q6U841 1118 aa18.21■□□□□ 0.51
GCOM1-212ENST00000496627 OTUD7AQ8TE49 926 aaPredicted RBP18.21■□□□□ 0.51
GCOM1-212ENST00000496627 TBX22Q9Y458 520 aa18.21■□□□□ 0.51
GCOM1-212ENST00000496627 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
GCOM1-212ENST00000496627 FSD2A1L4K1 749 aa18.21■□□□□ 0.51
GCOM1-212ENST00000496627 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
GCOM1-212ENST00000496627 FAM43AQ8N2R8 423 aa18.21■□□□□ 0.51
GCOM1-212ENST00000496627 CCT4P50991 539 aaKnown RBP18.2■□□□□ 0.5
GCOM1-212ENST00000496627 RABEP1Q15276 862 aa18.2■□□□□ 0.5
GCOM1-212ENST00000496627 EYA1Q99502 592 aa18.2■□□□□ 0.5
GCOM1-212ENST00000496627 G2E3Q7L622 706 aa18.2■□□□□ 0.5
GCOM1-212ENST00000496627 STK31Q9BXU1 1019 aa18.19■□□□□ 0.5
GCOM1-212ENST00000496627 FAM208AQ9UK61 1670 aaKnown RBP18.19■□□□□ 0.5
GCOM1-212ENST00000496627 LRRC37A3O60309 1634 aa18.19■□□□□ 0.5
GCOM1-212ENST00000496627 F6X3S4 739 aa18.18■□□□□ 0.5
GCOM1-212ENST00000496627 SDSP20132 328 aa18.18■□□□□ 0.5
GCOM1-212ENST00000496627 XRCC6P12956 609 aaKnown RBP eCLIP18.18■□□□□ 0.5
GCOM1-212ENST00000496627 PTMSP20962 102 aa18.18■□□□□ 0.5
GCOM1-212ENST00000496627 FER1L4A9Z1Z3 1794 aa18.18■□□□□ 0.5
GCOM1-212ENST00000496627 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
GCOM1-212ENST00000496627 NLRP6P59044 892 aa18.17■□□□□ 0.5
GCOM1-212ENST00000496627 XRN1Q8IZH2 1706 aaKnown RBP18.17■□□□□ 0.5
GCOM1-212ENST00000496627 USP26Q9BXU7 913 aa18.17■□□□□ 0.5
GCOM1-212ENST00000496627 AK9Q5TCS8 1911 aa18.16■□□□□ 0.5
GCOM1-212ENST00000496627 HTATSF1O43719 755 aaKnown RBP18.16■□□□□ 0.5
GCOM1-212ENST00000496627 GNAI2P04899 355 aa18.15■□□□□ 0.5
GCOM1-212ENST00000496627 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
GCOM1-212ENST00000496627 THEMISQ8N1K5 641 aaPredicted RBP18.15■□□□□ 0.5
GCOM1-212ENST00000496627 MARF1Q9Y4F3 1742 aaKnown RBP18.15■□□□□ 0.5
GCOM1-212ENST00000496627 GNAT3A8MTJ3 354 aa18.14■□□□□ 0.49
GCOM1-212ENST00000496627 SKOR2Q2VWA4 1001 aaPredicted RBP18.14■□□□□ 0.49
GCOM1-212ENST00000496627 CCDC30Q5VVM6 783 aa18.14■□□□□ 0.49
GCOM1-212ENST00000496627 MRE11P49959 708 aa18.14■□□□□ 0.49
GCOM1-212ENST00000496627 REC8O95072 547 aa18.13■□□□□ 0.49
GCOM1-212ENST00000496627 HOXC9P31274 260 aa18.13■□□□□ 0.49
GCOM1-212ENST00000496627 SSFA2P28290 1259 aa18.13■□□□□ 0.49
GCOM1-212ENST00000496627 FLIIQ13045 1269 aa18.13■□□□□ 0.49
GCOM1-212ENST00000496627 FKBP5Q13451 457 aaPredicted RBP18.13■□□□□ 0.49
GCOM1-212ENST00000496627 NUTM2GQ5VZR2 741 aa18.13■□□□□ 0.49
GCOM1-212ENST00000496627 USP54Q70EL1 1684 aa18.13■□□□□ 0.49
GCOM1-212ENST00000496627 GOLGA6L22H0YM25 854 aa18.12■□□□□ 0.49
GCOM1-212ENST00000496627 ISY1Q9ULR0 285 aaKnown RBP18.12■□□□□ 0.49
GCOM1-212ENST00000496627 GNAI3P08754 354 aa18.12■□□□□ 0.49
GCOM1-212ENST00000496627 PANK2Q9BZ23 570 aa18.12■□□□□ 0.49
GCOM1-212ENST00000496627 MAP3K5Q99683 1374 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms