RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 DEFB132Q7Z7B7 95 aa11.17□□□□□ -0.62
U2AF1-212ENST00000496462 COL22A1Q8NFW1 1626 aaPredicted RBP11.17□□□□□ -0.62
U2AF1-212ENST00000496462 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
U2AF1-212ENST00000496462 SSH2Q76I76 1423 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 NEFLP07196 543 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 NFE2L2Q16236 605 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 AKAP4Q5JQC9 854 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 CDK12Q9NYV4 1490 aaPredicted RBP11.16□□□□□ -0.62
U2AF1-212ENST00000496462 GNAI1P63096 354 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 SPATA31A1Q5TZJ5 1347 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 IL13P35225 146 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 DCAF5Q96JK2 942 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 AXIN2Q9Y2T1 843 aa11.16□□□□□ -0.62
U2AF1-212ENST00000496462 NBPF14Q5TI25 921 aa11.15□□□□□ -0.62
U2AF1-212ENST00000496462 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.15□□□□□ -0.62
U2AF1-212ENST00000496462 NBPF6Q5VWK0 638 aa11.15□□□□□ -0.62
U2AF1-212ENST00000496462 NBPF4Q96M43 638 aa11.15□□□□□ -0.62
U2AF1-212ENST00000496462 NPHP1O15259 732 aa11.14□□□□□ -0.63
U2AF1-212ENST00000496462 TRIM37O94972 964 aa11.14□□□□□ -0.63
U2AF1-212ENST00000496462 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
U2AF1-212ENST00000496462 STK31Q9BXU1 1019 aa11.14□□□□□ -0.63
U2AF1-212ENST00000496462 TEX13AQ9BXU3 409 aaPredicted RBP11.14□□□□□ -0.63
U2AF1-212ENST00000496462 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
U2AF1-212ENST00000496462 APAF1O14727 1248 aa11.13□□□□□ -0.63
U2AF1-212ENST00000496462 RBM42Q9BTD8 480 aaKnown RBP11.13□□□□□ -0.63
U2AF1-212ENST00000496462 TSPYL4Q9UJ04 414 aa11.13□□□□□ -0.63
U2AF1-212ENST00000496462 IGSF1Q8N6C5 1336 aa11.13□□□□□ -0.63
U2AF1-212ENST00000496462 CD163L1Q9NR16 1453 aa11.13□□□□□ -0.63
U2AF1-212ENST00000496462 OVOS2A0A0G2JMS6 1433 aa11.12□□□□□ -0.63
U2AF1-212ENST00000496462 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
U2AF1-212ENST00000496462 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
U2AF1-212ENST00000496462 MSH5O43196 834 aa11.11□□□□□ -0.63
U2AF1-212ENST00000496462 MPRIPQ6WCQ1 1025 aa11.11□□□□□ -0.63
U2AF1-212ENST00000496462 APBA3O96018 575 aa11.11□□□□□ -0.63
U2AF1-212ENST00000496462 EN1Q05925 392 aaPredicted RBP11.11□□□□□ -0.63
U2AF1-212ENST00000496462 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
U2AF1-212ENST00000496462 ERVV-2B6SEH9 535 aa11.1□□□□□ -0.63
U2AF1-212ENST00000496462 STARD3NLO95772 234 aa11.1□□□□□ -0.63
U2AF1-212ENST00000496462 MS4A1P11836 297 aa11.1□□□□□ -0.63
U2AF1-212ENST00000496462 RRP7AQ9Y3A4 280 aaKnown RBP11.1□□□□□ -0.63
U2AF1-212ENST00000496462 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
U2AF1-212ENST00000496462 TAF7Q15545 349 aaPredicted RBP11.1□□□□□ -0.63
U2AF1-212ENST00000496462 CAMTA1Q9Y6Y1 1673 aa11.1□□□□□ -0.63
U2AF1-212ENST00000496462 TMPOP42166 694 aaKnown RBP11.1□□□□□ -0.63
U2AF1-212ENST00000496462 GLI3P10071 1580 aa11.1□□□□□ -0.63
U2AF1-212ENST00000496462 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
U2AF1-212ENST00000496462 PLEKHG2Q9H7P9 1386 aa11.09□□□□□ -0.63
U2AF1-212ENST00000496462 E9PSI1 815 aa11.09□□□□□ -0.63
U2AF1-212ENST00000496462 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
U2AF1-212ENST00000496462 ABCC6O95255 1503 aa11.09□□□□□ -0.63
U2AF1-212ENST00000496462 KAT6BQ8WYB5 2073 aa11.09□□□□□ -0.63
U2AF1-212ENST00000496462 TOPAZ1Q8N9V7 1692 aa11.09□□□□□ -0.63
U2AF1-212ENST00000496462 COL14A1Q05707 1796 aaKnown RBP11.09□□□□□ -0.63
U2AF1-212ENST00000496462 EP400Q96L91 3159 aa11.09□□□□□ -0.63
U2AF1-212ENST00000496462 SLIT3O75094 1523 aa11.09□□□□□ -0.63
U2AF1-212ENST00000496462 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
U2AF1-212ENST00000496462 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
U2AF1-212ENST00000496462 AEBP1Q8IUX7 1158 aa11.08□□□□□ -0.64
U2AF1-212ENST00000496462 CHMP4BQ9H444 224 aaKnown RBP11.08□□□□□ -0.64
U2AF1-212ENST00000496462 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
U2AF1-212ENST00000496462 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
U2AF1-212ENST00000496462 FMNL2Q96PY5 1086 aa11.08□□□□□ -0.64
U2AF1-212ENST00000496462 HDAC5Q9UQL6 1122 aa11.08□□□□□ -0.64
U2AF1-212ENST00000496462 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
U2AF1-212ENST00000496462 PLCH1Q4KWH8 1693 aa11.07□□□□□ -0.64
U2AF1-212ENST00000496462 COL5A2P05997 1499 aaPredicted RBP11.07□□□□□ -0.64
U2AF1-212ENST00000496462 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
U2AF1-212ENST00000496462 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
U2AF1-212ENST00000496462 BABAM1Q9NWV8 329 aa11.07□□□□□ -0.64
U2AF1-212ENST00000496462 MARF1Q9Y4F3 1742 aaKnown RBP11.07□□□□□ -0.64
U2AF1-212ENST00000496462 STK32BQ9NY57 414 aa11.07□□□□□ -0.64
U2AF1-212ENST00000496462 MON2Q7Z3U7 1717 aa11.07□□□□□ -0.64
U2AF1-212ENST00000496462 SRCAPQ6ZRS2 3230 aa11.07□□□□□ -0.64
U2AF1-212ENST00000496462 DDX58O95786 925 aaKnown RBP11.07□□□□□ -0.64
U2AF1-212ENST00000496462 PHKG2P15735 406 aa11.07□□□□□ -0.64
U2AF1-212ENST00000496462 MTHFSDQ2M296 383 aaKnown RBP11.06□□□□□ -0.64
U2AF1-212ENST00000496462 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
U2AF1-212ENST00000496462 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
U2AF1-212ENST00000496462 AK7Q96M32 723 aa11.06□□□□□ -0.64
U2AF1-212ENST00000496462 A0A087WZG4 1122 aa11.06□□□□□ -0.64
U2AF1-212ENST00000496462 RNMTO43148 476 aaKnown RBP11.06□□□□□ -0.64
U2AF1-212ENST00000496462 AKAP12Q02952 1782 aa11.05□□□□□ -0.64
U2AF1-212ENST00000496462 NRKQ7Z2Y5 1582 aa11.05□□□□□ -0.64
U2AF1-212ENST00000496462 ABCA3Q99758 1704 aa11.05□□□□□ -0.64
U2AF1-212ENST00000496462 EZH2Q15910 746 aaKnown RBP11.05□□□□□ -0.64
U2AF1-212ENST00000496462 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
U2AF1-212ENST00000496462 PRIM1P49642 420 aaKnown RBP11.05□□□□□ -0.64
U2AF1-212ENST00000496462 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
U2AF1-212ENST00000496462 FLAD1Q8NFF5 587 aa11.04□□□□□ -0.64
U2AF1-212ENST00000496462 PHRF1Q9P1Y6 1649 aaKnown RBP11.04□□□□□ -0.64
U2AF1-212ENST00000496462 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
U2AF1-212ENST00000496462 IFT57Q9NWB7 429 aa11.04□□□□□ -0.64
U2AF1-212ENST00000496462 NWD2Q9ULI1 1742 aa11.04□□□□□ -0.64
U2AF1-212ENST00000496462 PIK3C2AO00443 1686 aa11.04□□□□□ -0.64
U2AF1-212ENST00000496462 GTF2E1P29083 439 aaPredicted RBP11.04□□□□□ -0.64
U2AF1-212ENST00000496462 TMX4Q9H1E5 349 aaPredicted RBP11.04□□□□□ -0.64
U2AF1-212ENST00000496462 CCDC30Q5VVM6 783 aa11.03□□□□□ -0.64
U2AF1-212ENST00000496462 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
U2AF1-212ENST00000496462 NCAPD2Q15021 1401 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms