RNA–Protein interactions for RNA: ENST00000494062.2

SPART-209, Transcript of spartin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPART, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-209ENST00000494062 CHD1LQ86WJ1 897 aa23.16■■□□□ 1.3
SPART-209ENST00000494062 G2E3Q7L622 706 aa23.16■■□□□ 1.3
SPART-209ENST00000494062 RIMS1Q86UR5 1692 aaKnown RBP23.15■■□□□ 1.3
SPART-209ENST00000494062 ABCC4O15439 1325 aa23.14■■□□□ 1.29
SPART-209ENST00000494062 NRKQ7Z2Y5 1582 aa23.14■■□□□ 1.29
SPART-209ENST00000494062 NUCB1Q02818 461 aa23.14■■□□□ 1.29
SPART-209ENST00000494062 ARHGAP45Q92619 1136 aa23.14■■□□□ 1.29
SPART-209ENST00000494062 TOPAZ1Q8N9V7 1692 aa23.13■■□□□ 1.29
SPART-209ENST00000494062 SETD1BQ9UPS6 1966 aaKnown RBP23.13■■□□□ 1.29
SPART-209ENST00000494062 CEP170BQ9Y4F5 1589 aaPredicted RBP23.13■■□□□ 1.29
SPART-209ENST00000494062 LRRC59Q96AG4 307 aaKnown RBP23.12■■□□□ 1.29
SPART-209ENST00000494062 BRPF1P55201 1214 aaPredicted RBP23.11■■□□□ 1.29
SPART-209ENST00000494062 PIK3R4Q99570 1358 aa23.11■■□□□ 1.29
SPART-209ENST00000494062 MEIS3Q99687 375 aa23.11■■□□□ 1.29
SPART-209ENST00000494062 IGSF1Q8N6C5 1336 aa23.1■■□□□ 1.29
SPART-209ENST00000494062 NFKBIBQ15653 356 aa23.1■■□□□ 1.29
SPART-209ENST00000494062 GAS2L2Q8NHY3 880 aa23.1■■□□□ 1.29
SPART-209ENST00000494062 ARHGEF10O15013 1369 aa23.09■■□□□ 1.29
SPART-209ENST00000494062 TBC1D32Q96NH3 1257 aa23.09■■□□□ 1.29
SPART-209ENST00000494062 C16orf71Q8IYS4 520 aaPredicted RBP23.08■■□□□ 1.29
SPART-209ENST00000494062 GNAT3A8MTJ3 354 aa23.08■■□□□ 1.28
SPART-209ENST00000494062 C22orf23Q9BZE7 217 aa23.07■■□□□ 1.28
SPART-209ENST00000494062 CRB1P82279 1406 aa23.07■■□□□ 1.28
SPART-209ENST00000494062 SMARCA5O60264 1052 aaPredicted RBP23.06■■□□□ 1.28
SPART-209ENST00000494062 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
SPART-209ENST00000494062 MSH6P52701 1360 aa23.06■■□□□ 1.28
SPART-209ENST00000494062 PIK3C2AO00443 1686 aa23.06■■□□□ 1.28
SPART-209ENST00000494062 NBPF6Q5VWK0 638 aa23.06■■□□□ 1.28
SPART-209ENST00000494062 DDX17Q92841 729 aaKnown RBP23.06■■□□□ 1.28
SPART-209ENST00000494062 NBPF4Q96M43 638 aa23.06■■□□□ 1.28
SPART-209ENST00000494062 FRAT2O75474 233 aaPredicted RBP23.06■■□□□ 1.28
SPART-209ENST00000494062 PROSER2Q86WR7 435 aaPredicted RBP23.05■■□□□ 1.28
SPART-209ENST00000494062 EIF2S2P20042 333 aaKnown RBP23.05■■□□□ 1.28
SPART-209ENST00000494062 BECN1Q14457 450 aa23.05■■□□□ 1.28
SPART-209ENST00000494062 CHMP4BQ9H444 224 aaKnown RBP23.04■■□□□ 1.28
SPART-209ENST00000494062 FKBP5Q13451 457 aaPredicted RBP23.04■■□□□ 1.28
SPART-209ENST00000494062 OTUD7AQ8TE49 926 aaPredicted RBP23.04■■□□□ 1.28
SPART-209ENST00000494062 STK31Q9BXU1 1019 aa23.03■■□□□ 1.28
SPART-209ENST00000494062 GCC1Q96CN9 775 aa23.03■■□□□ 1.28
SPART-209ENST00000494062 TBC1D2Q9BYX2 928 aa23.03■■□□□ 1.28
SPART-209ENST00000494062 LGR6Q9HBX8 967 aa23.02■■□□□ 1.28
SPART-209ENST00000494062 XRN1Q8IZH2 1706 aaKnown RBP23.02■■□□□ 1.28
SPART-209ENST00000494062 ANKARQ7Z5J8 1434 aa23.01■■□□□ 1.27
SPART-209ENST00000494062 INTS3Q68E01 1043 aaKnown RBP23.01■■□□□ 1.27
SPART-209ENST00000494062 KDRP35968 1356 aa23■■□□□ 1.27
SPART-209ENST00000494062 HAP1P54257 671 aaPredicted RBP23■■□□□ 1.27
SPART-209ENST00000494062 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
SPART-209ENST00000494062 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
SPART-209ENST00000494062 NALCNQ8IZF0 1738 aa22.99■■□□□ 1.27
SPART-209ENST00000494062 ANXA1P04083 346 aa22.99■■□□□ 1.27
SPART-209ENST00000494062 CEP85Q6P2H3 762 aa22.98■■□□□ 1.27
SPART-209ENST00000494062 KCNQ3O43525 872 aa22.98■■□□□ 1.27
SPART-209ENST00000494062 IP6K1Q92551 441 aa22.98■■□□□ 1.27
SPART-209ENST00000494062 KIAA0232Q92628 1395 aa22.97■■□□□ 1.27
SPART-209ENST00000494062 GCP02774 474 aa22.97■■□□□ 1.27
SPART-209ENST00000494062 RGS12O14924 1447 aa22.97■■□□□ 1.27
SPART-209ENST00000494062 FLIIQ13045 1269 aa22.97■■□□□ 1.27
SPART-209ENST00000494062 TAF7Q15545 349 aaPredicted RBP22.96■■□□□ 1.27
SPART-209ENST00000494062 MAP3K5Q99683 1374 aa22.96■■□□□ 1.27
SPART-209ENST00000494062 TSHZ3Q63HK5 1081 aa22.95■■□□□ 1.26
SPART-209ENST00000494062 ZNF530Q6P9A1 599 aaPredicted RBP22.95■■□□□ 1.26
SPART-209ENST00000494062 PHAXQ9H814 394 aaKnown RBP22.95■■□□□ 1.26
SPART-209ENST00000494062 PTPRCP08575 1304 aa22.95■■□□□ 1.26
SPART-209ENST00000494062 NPHP4O75161 1426 aaPredicted RBP22.95■■□□□ 1.26
SPART-209ENST00000494062 EXOC6BQ9Y2D4 811 aa22.95■■□□□ 1.26
SPART-209ENST00000494062 HDGFL1Q5TGJ6 251 aa22.94■■□□□ 1.26
SPART-209ENST00000494062 TBC1D9Q6ZT07 1266 aa22.94■■□□□ 1.26
SPART-209ENST00000494062 ANKRD44Q8N8A2 993 aa22.94■■□□□ 1.26
SPART-209ENST00000494062 RGPD1P0DJD0 1748 aa22.94■■□□□ 1.26
SPART-209ENST00000494062 RTL1A6NKG5 1358 aa22.93■■□□□ 1.26
SPART-209ENST00000494062 CCDC30Q5VVM6 783 aa22.93■■□□□ 1.26
SPART-209ENST00000494062 DCTPP1Q9H773 170 aa22.93■■□□□ 1.26
SPART-209ENST00000494062 FOXD4L1Q9NU39 408 aa22.93■■□□□ 1.26
SPART-209ENST00000494062 BMP2KLQ5H9B9 411 aa22.93■■□□□ 1.26
SPART-209ENST00000494062 KRT28Q7Z3Y7 464 aa22.93■■□□□ 1.26
SPART-209ENST00000494062 GSPT1P15170 499 aaKnown RBP22.92■■□□□ 1.26
SPART-209ENST00000494062 HSPA2P54652 639 aa22.92■■□□□ 1.26
SPART-209ENST00000494062 CABLES1Q8TDN4 633 aa22.92■■□□□ 1.26
SPART-209ENST00000494062 AXIN2Q9Y2T1 843 aa22.92■■□□□ 1.26
SPART-209ENST00000494062 PLEKHM2Q8IWE5 1019 aa22.92■■□□□ 1.26
SPART-209ENST00000494062 FMN2Q9NZ56 1722 aa22.92■■□□□ 1.26
SPART-209ENST00000494062 ADGRL3Q9HAR2 1447 aa22.92■■□□□ 1.26
SPART-209ENST00000494062 VIRMAQ69YN4 1812 aaKnown RBP22.91■■□□□ 1.26
SPART-209ENST00000494062 TEFQ10587 303 aa22.91■■□□□ 1.26
SPART-209ENST00000494062 ANKRD24Q8TF21 1146 aa22.9■■□□□ 1.26
SPART-209ENST00000494062 RBM42Q9BTD8 480 aaKnown RBP22.9■■□□□ 1.26
SPART-209ENST00000494062 KCNH5Q8NCM2 988 aa22.9■■□□□ 1.26
SPART-209ENST00000494062 USP35Q9P2H5 1018 aa22.9■■□□□ 1.26
SPART-209ENST00000494062 ATP10DQ9P241 1426 aa22.88■■□□□ 1.25
SPART-209ENST00000494062 RPAP2Q8IXW5 612 aaPredicted RBP22.88■■□□□ 1.25
SPART-209ENST00000494062 CCT4P50991 539 aaKnown RBP22.87■■□□□ 1.25
SPART-209ENST00000494062 PNMA6EA0A0J9YXQ4 647 aa22.86■■□□□ 1.25
SPART-209ENST00000494062 BTBD11A6QL63 1104 aa22.86■■□□□ 1.25
SPART-209ENST00000494062 CHPF2Q9P2E5 772 aa22.86■■□□□ 1.25
SPART-209ENST00000494062 LRRFIP2Q9Y608 721 aaKnown RBP22.86■■□□□ 1.25
SPART-209ENST00000494062 HTATSF1O43719 755 aaKnown RBP22.86■■□□□ 1.25
SPART-209ENST00000494062 NWD1Q149M9 1564 aa22.86■■□□□ 1.25
SPART-209ENST00000494062 HSCBQ8IWL3 235 aa22.86■■□□□ 1.25
SPART-209ENST00000494062 GNAI2P04899 355 aa22.85■■□□□ 1.25
SPART-209ENST00000494062 CHD2O14647 1828 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms