RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 TSPOAP1O95153 1857 aa13.46□□□□□ -0.26
COL2A1-208ENST00000493991 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
COL2A1-208ENST00000493991 PHAXQ9H814 394 aaKnown RBP13.45□□□□□ -0.26
COL2A1-208ENST00000493991 ABCC11Q96J66 1382 aa13.45□□□□□ -0.26
COL2A1-208ENST00000493991 AAMPQ13685 434 aa13.45□□□□□ -0.26
COL2A1-208ENST00000493991 KRT28Q7Z3Y7 464 aa13.45□□□□□ -0.26
COL2A1-208ENST00000493991 LRRCC1Q9C099 1032 aa13.45□□□□□ -0.26
COL2A1-208ENST00000493991 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
COL2A1-208ENST00000493991 TRPM2O94759 1503 aa13.44□□□□□ -0.26
COL2A1-208ENST00000493991 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
COL2A1-208ENST00000493991 KDM4AO75164 1064 aa13.44□□□□□ -0.26
COL2A1-208ENST00000493991 ZMYM4Q5VZL5 1548 aa13.44□□□□□ -0.26
COL2A1-208ENST00000493991 PPP6R1Q9UPN7 881 aa13.44□□□□□ -0.26
COL2A1-208ENST00000493991 GOLGA6L4A6NEF3 574 aa13.44□□□□□ -0.26
COL2A1-208ENST00000493991 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
COL2A1-208ENST00000493991 RNF214Q8ND24 703 aa13.44□□□□□ -0.26
COL2A1-208ENST00000493991 ADCY10Q96PN6 1610 aa13.44□□□□□ -0.26
COL2A1-208ENST00000493991 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
COL2A1-208ENST00000493991 CWC27Q6UX04 472 aaKnown RBP13.43□□□□□ -0.26
COL2A1-208ENST00000493991 PLEKHF1Q96S99 279 aa13.43□□□□□ -0.26
COL2A1-208ENST00000493991 MCM4P33991 863 aa13.43□□□□□ -0.26
COL2A1-208ENST00000493991 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
COL2A1-208ENST00000493991 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
COL2A1-208ENST00000493991 GPATCH3Q96I76 525 aa13.43□□□□□ -0.26
COL2A1-208ENST00000493991 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
COL2A1-208ENST00000493991 DDX58O95786 925 aaKnown RBP13.43□□□□□ -0.26
COL2A1-208ENST00000493991 TATP17735 454 aaPredicted RBP13.43□□□□□ -0.26
COL2A1-208ENST00000493991 DNAJC2Q99543 621 aaKnown RBP13.43□□□□□ -0.26
COL2A1-208ENST00000493991 CHPF2Q9P2E5 772 aa13.43□□□□□ -0.26
COL2A1-208ENST00000493991 TRMT2AQ8IZ69 625 aaKnown RBP13.42□□□□□ -0.26
COL2A1-208ENST00000493991 RRAGDQ9NQL2 400 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-208ENST00000493991 NUTM2BA6NNL0 878 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-208ENST00000493991 NUTM2EB1AL46 878 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-208ENST00000493991 NUTM2AQ8IVF1 878 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-208ENST00000493991 ANKRD24Q8TF21 1146 aa13.42□□□□□ -0.26
COL2A1-208ENST00000493991 ZBTB7BO15156 539 aaPredicted RBP13.41□□□□□ -0.26
COL2A1-208ENST00000493991 NINLQ9Y2I6 1382 aa13.41□□□□□ -0.26
COL2A1-208ENST00000493991 CABP4P57796 275 aa13.41□□□□□ -0.26
COL2A1-208ENST00000493991 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
COL2A1-208ENST00000493991 PPFIA3O75145 1194 aa13.41□□□□□ -0.26
COL2A1-208ENST00000493991 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
COL2A1-208ENST00000493991 CCDC8Q9H0W5 538 aaPredicted RBP13.41□□□□□ -0.26
COL2A1-208ENST00000493991 R3HCC1Q9Y3T6 440 aaKnown RBP13.41□□□□□ -0.26
COL2A1-208ENST00000493991 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
COL2A1-208ENST00000493991 VPS37CA5D8V6 355 aaPredicted RBP13.4□□□□□ -0.26
COL2A1-208ENST00000493991 KCNQ3O43525 872 aa13.4□□□□□ -0.26
COL2A1-208ENST00000493991 NUCB1Q02818 461 aa13.4□□□□□ -0.26
COL2A1-208ENST00000493991 TOMM22Q9NS69 142 aa13.4□□□□□ -0.26
COL2A1-208ENST00000493991 MLH3Q9UHC1 1453 aa13.4□□□□□ -0.26
COL2A1-208ENST00000493991 IL16Q14005 1332 aa13.39□□□□□ -0.27
COL2A1-208ENST00000493991 GCP02774 474 aa13.39□□□□□ -0.27
COL2A1-208ENST00000493991 XRCC6P12956 609 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL2A1-208ENST00000493991 HOXC9P31274 260 aa13.39□□□□□ -0.27
COL2A1-208ENST00000493991 PPP1R42Q7Z4L9 355 aa13.39□□□□□ -0.27
COL2A1-208ENST00000493991 AACSQ86V21 672 aa13.39□□□□□ -0.27
COL2A1-208ENST00000493991 PUS7Q96PZ0 661 aaKnown RBP13.39□□□□□ -0.27
COL2A1-208ENST00000493991 FSD1Q9BTV5 496 aa13.39□□□□□ -0.27
COL2A1-208ENST00000493991 TMEM2Q9UHN6 1383 aa13.39□□□□□ -0.27
COL2A1-208ENST00000493991 GTF2E1P29083 439 aaPredicted RBP13.39□□□□□ -0.27
COL2A1-208ENST00000493991 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
COL2A1-208ENST00000493991 PA2G4Q9UQ80 394 aaKnown RBP13.39□□□□□ -0.27
COL2A1-208ENST00000493991 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
COL2A1-208ENST00000493991 DDX11L8A8MPP1 907 aa13.38□□□□□ -0.27
COL2A1-208ENST00000493991 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
COL2A1-208ENST00000493991 NBPF6Q5VWK0 638 aa13.38□□□□□ -0.27
COL2A1-208ENST00000493991 NBPF4Q96M43 638 aa13.38□□□□□ -0.27
COL2A1-208ENST00000493991 PODXL2Q9NZ53 605 aa13.38□□□□□ -0.27
COL2A1-208ENST00000493991 SPG7Q9UQ90 795 aa13.38□□□□□ -0.27
COL2A1-208ENST00000493991 PRPF40AO75400 957 aaKnown RBP13.38□□□□□ -0.27
COL2A1-208ENST00000493991 SDSP20132 328 aa13.38□□□□□ -0.27
COL2A1-208ENST00000493991 NEO1Q92859 1461 aa13.38□□□□□ -0.27
COL2A1-208ENST00000493991 BOLA2Q9H3K6 86 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 SBNO2Q9Y2G9 1366 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 CAVIN1Q6NZI2 390 aaKnown RBP13.37□□□□□ -0.27
COL2A1-208ENST00000493991 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 MAP3K2Q9Y2U5 619 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 IQGAP3Q86VI3 1631 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 ERC2O15083 957 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 MX1P20591 662 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 SMC5Q8IY18 1101 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 MYD88Q99836 296 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 CHMP4AQ9BY43 222 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 GRPEL1Q9HAV7 217 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 TBX22Q9Y458 520 aa13.37□□□□□ -0.27
COL2A1-208ENST00000493991 STK3Q13188 491 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 KCNH5Q8NCM2 988 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 DNAAF4Q8WXU2 420 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 ZBTB3Q9H5J0 574 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 ESPNB1AK53 854 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 K7ELQ4 463 aaPredicted RBP13.36□□□□□ -0.27
COL2A1-208ENST00000493991 MRE11P49959 708 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 NFATC2IPQ8NCF5 419 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 CROCC2H7BZ55 1655 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 INSRP06213 1382 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 ABCC3O15438 1527 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 SSFA2P28290 1259 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 PIP4K2BP78356 416 aa13.36□□□□□ -0.27
COL2A1-208ENST00000493991 E9PCH4 1651 aa13.35□□□□□ -0.27
COL2A1-208ENST00000493991 CEP85Q6P2H3 762 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 375.7 ms