RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
TM4SF1-203ENST00000493298 KIF24Q5T7B8 1368 aa12.33□□□□□ -0.44
TM4SF1-203ENST00000493298 BAG6P46379 1132 aa12.33□□□□□ -0.44
TM4SF1-203ENST00000493298 RALBP1Q15311 655 aa12.33□□□□□ -0.44
TM4SF1-203ENST00000493298 SMG6Q86US8 1419 aaKnown RBP12.33□□□□□ -0.44
TM4SF1-203ENST00000493298 UTRNP46939 3433 aa12.33□□□□□ -0.44
TM4SF1-203ENST00000493298 INSRP06213 1382 aa12.32□□□□□ -0.44
TM4SF1-203ENST00000493298 CGNL1Q0VF96 1302 aa12.32□□□□□ -0.44
TM4SF1-203ENST00000493298 MYBBP1AQ9BQG0 1328 aaKnown RBP12.32□□□□□ -0.44
TM4SF1-203ENST00000493298 HSP90AB2PQ58FF8 381 aa12.31□□□□□ -0.44
TM4SF1-203ENST00000493298 NBPF6Q5VWK0 638 aa12.31□□□□□ -0.44
TM4SF1-203ENST00000493298 PNISRQ8TF01 805 aaKnown RBP12.31□□□□□ -0.44
TM4SF1-203ENST00000493298 NBPF4Q96M43 638 aa12.31□□□□□ -0.44
TM4SF1-203ENST00000493298 NLRP2Q9NX02 1062 aa12.31□□□□□ -0.44
TM4SF1-203ENST00000493298 EMILIN1Q9Y6C2 1016 aa12.31□□□□□ -0.44
TM4SF1-203ENST00000493298 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
TM4SF1-203ENST00000493298 COL24A1Q17RW2 1714 aa12.31□□□□□ -0.44
TM4SF1-203ENST00000493298 QSER1Q2KHR3 1735 aa12.31□□□□□ -0.44
TM4SF1-203ENST00000493298 NSD2O96028 1365 aa12.3□□□□□ -0.44
TM4SF1-203ENST00000493298 FLT4P35916 1363 aa12.3□□□□□ -0.44
TM4SF1-203ENST00000493298 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
TM4SF1-203ENST00000493298 KCNQ2O43526 872 aa12.3□□□□□ -0.44
TM4SF1-203ENST00000493298 APBA3O96018 575 aa12.3□□□□□ -0.44
TM4SF1-203ENST00000493298 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
TM4SF1-203ENST00000493298 IL2RBP14784 551 aa12.3□□□□□ -0.44
TM4SF1-203ENST00000493298 VIRMAQ69YN4 1812 aaKnown RBP12.3□□□□□ -0.44
TM4SF1-203ENST00000493298 GOLGB1Q14789 3259 aaKnown RBP12.29□□□□□ -0.44
TM4SF1-203ENST00000493298 PLSCR1O15162 318 aa12.29□□□□□ -0.44
TM4SF1-203ENST00000493298 SF3B2Q13435 895 aaKnown RBP12.29□□□□□ -0.44
TM4SF1-203ENST00000493298 BCL11BQ9C0K0 894 aaPredicted RBP12.29□□□□□ -0.44
TM4SF1-203ENST00000493298 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
TM4SF1-203ENST00000493298 MORC1Q86VD1 984 aa12.28□□□□□ -0.44
TM4SF1-203ENST00000493298 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
TM4SF1-203ENST00000493298 EXOC5O00471 708 aa12.27□□□□□ -0.45
TM4SF1-203ENST00000493298 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
TM4SF1-203ENST00000493298 LTV1Q96GA3 475 aaPredicted RBP12.27□□□□□ -0.45
TM4SF1-203ENST00000493298 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
TM4SF1-203ENST00000493298 AMPHP49418 695 aa12.26□□□□□ -0.45
TM4SF1-203ENST00000493298 MTHFSP49914 203 aa12.26□□□□□ -0.45
TM4SF1-203ENST00000493298 R3HDM1Q15032 1099 aaKnown RBP12.25□□□□□ -0.45
TM4SF1-203ENST00000493298 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
TM4SF1-203ENST00000493298 C5P01031 1676 aa12.23□□□□□ -0.45
TM4SF1-203ENST00000493298 PDGFDQ9GZP0 370 aaPredicted RBP12.23□□□□□ -0.45
TM4SF1-203ENST00000493298 MRS2Q9HD23 443 aa12.23□□□□□ -0.45
TM4SF1-203ENST00000493298 ACSBG1Q96GR2 724 aa12.22□□□□□ -0.45
TM4SF1-203ENST00000493298 EYA1Q99502 592 aa12.22□□□□□ -0.45
TM4SF1-203ENST00000493298 LRRC4BQ9NT99 713 aa12.22□□□□□ -0.45
TM4SF1-203ENST00000493298 CYP27B1O15528 508 aa12.21□□□□□ -0.45
TM4SF1-203ENST00000493298 EIF4A2Q14240 407 aaKnown RBP12.21□□□□□ -0.45
TM4SF1-203ENST00000493298 TXNRD1Q16881 649 aa12.21□□□□□ -0.45
TM4SF1-203ENST00000493298 ZCRB1Q8TBF4 217 aaKnown RBP12.21□□□□□ -0.45
TM4SF1-203ENST00000493298 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
TM4SF1-203ENST00000493298 ADAMTS7Q9UKP4 1686 aa12.2□□□□□ -0.46
TM4SF1-203ENST00000493298 IGSF1Q8N6C5 1336 aa12.2□□□□□ -0.46
TM4SF1-203ENST00000493298 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
TM4SF1-203ENST00000493298 UBR3Q6ZT12 1888 aa12.2□□□□□ -0.46
TM4SF1-203ENST00000493298 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
TM4SF1-203ENST00000493298 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
TM4SF1-203ENST00000493298 IL13P35225 146 aa12.19□□□□□ -0.46
TM4SF1-203ENST00000493298 KDRP35968 1356 aa12.18□□□□□ -0.46
TM4SF1-203ENST00000493298 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
TM4SF1-203ENST00000493298 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
TM4SF1-203ENST00000493298 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
TM4SF1-203ENST00000493298 SENP3-EIF4A1A0A087X0R7 540 aa12.17□□□□□ -0.46
TM4SF1-203ENST00000493298 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
TM4SF1-203ENST00000493298 ZNF827Q17R98 1081 aa12.17□□□□□ -0.46
TM4SF1-203ENST00000493298 FAM9BQ8IZU0 186 aa12.17□□□□□ -0.46
TM4SF1-203ENST00000493298 MYH14Q7Z406 1995 aaKnown RBP12.16□□□□□ -0.46
TM4SF1-203ENST00000493298 CICQ96RK0 1608 aaPredicted RBP12.16□□□□□ -0.46
TM4SF1-203ENST00000493298 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
TM4SF1-203ENST00000493298 PCDH11XQ9BZA7 1347 aa12.15□□□□□ -0.46
TM4SF1-203ENST00000493298 PCDH11YQ9BZA8 1340 aa12.15□□□□□ -0.46
TM4SF1-203ENST00000493298 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
TM4SF1-203ENST00000493298 KDM6AO15550 1401 aaPredicted RBP12.15□□□□□ -0.46
TM4SF1-203ENST00000493298 PPM1GO15355 546 aaPredicted RBP12.15□□□□□ -0.46
TM4SF1-203ENST00000493298 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
TM4SF1-203ENST00000493298 PLEKHF1Q96S99 279 aa12.15□□□□□ -0.46
TM4SF1-203ENST00000493298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.15□□□□□ -0.46
TM4SF1-203ENST00000493298 SIPA1L3O60292 1781 aaPredicted RBP12.15□□□□□ -0.46
TM4SF1-203ENST00000493298 TATP17735 454 aaPredicted RBP12.14□□□□□ -0.47
TM4SF1-203ENST00000493298 PTGER2P43116 358 aa12.14□□□□□ -0.47
TM4SF1-203ENST00000493298 KCNQ4P56696 695 aa12.14□□□□□ -0.47
TM4SF1-203ENST00000493298 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
TM4SF1-203ENST00000493298 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
TM4SF1-203ENST00000493298 RAPGEF4Q8WZA2 1011 aa12.14□□□□□ -0.47
TM4SF1-203ENST00000493298 TJP1Q07157 1748 aa12.12□□□□□ -0.47
TM4SF1-203ENST00000493298 NBPF14Q5TI25 921 aa12.12□□□□□ -0.47
TM4SF1-203ENST00000493298 UBR2Q8IWV8 1755 aa12.11□□□□□ -0.47
TM4SF1-203ENST00000493298 PHKG2P15735 406 aa12.11□□□□□ -0.47
TM4SF1-203ENST00000493298 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
TM4SF1-203ENST00000493298 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
TM4SF1-203ENST00000493298 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
TM4SF1-203ENST00000493298 MRC1P22897 1456 aa12.1□□□□□ -0.47
TM4SF1-203ENST00000493298 DIAPH1O60610 1272 aaKnown RBP12.1□□□□□ -0.47
TM4SF1-203ENST00000493298 SLC27A3Q5K4L6 730 aa12.1□□□□□ -0.47
TM4SF1-203ENST00000493298 PIGBQ92521 554 aa12.1□□□□□ -0.47
TM4SF1-203ENST00000493298 PHACTR3Q96KR7 559 aa12.1□□□□□ -0.47
TM4SF1-203ENST00000493298 RSPH6AQ9H0K4 717 aa12.1□□□□□ -0.47
TM4SF1-203ENST00000493298 C4AP0C0L4 1744 aa12.1□□□□□ -0.47
TM4SF1-203ENST00000493298 CCDC146Q8IYE0 955 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms