RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 IGSF1Q8N6C5 1336 aa24.07■■□□□ 1.44
LMNB1-206ENST00000492190 BAG6P46379 1132 aa24.06■■□□□ 1.44
LMNB1-206ENST00000492190 EN1Q05925 392 aaPredicted RBP24.06■■□□□ 1.44
LMNB1-206ENST00000492190 DDX54Q8TDD1 881 aaKnown RBP24.06■■□□□ 1.44
LMNB1-206ENST00000492190 DOT1LQ8TEK3 1739 aa24.05■■□□□ 1.44
LMNB1-206ENST00000492190 TATP17735 454 aaPredicted RBP24.05■■□□□ 1.44
LMNB1-206ENST00000492190 APBA3O96018 575 aa24.04■■□□□ 1.44
LMNB1-206ENST00000492190 IL13P35225 146 aa24.04■■□□□ 1.44
LMNB1-206ENST00000492190 BTAF1O14981 1849 aa24.04■■□□□ 1.44
LMNB1-206ENST00000492190 COL3A1P02461 1466 aaPredicted RBP24.04■■□□□ 1.44
LMNB1-206ENST00000492190 RREB1Q92766 1687 aa24.04■■□□□ 1.44
LMNB1-206ENST00000492190 KCNQ2O43526 872 aa24.03■■□□□ 1.44
LMNB1-206ENST00000492190 DDX10Q13206 875 aaKnown RBP24.03■■□□□ 1.44
LMNB1-206ENST00000492190 RGPD3A6NKT7 1758 aaPredicted RBP24.02■■□□□ 1.44
LMNB1-206ENST00000492190 RGPD4Q7Z3J3 1758 aa24.02■■□□□ 1.44
LMNB1-206ENST00000492190 CAMKK2Q96RR4 588 aa24.02■■□□□ 1.44
LMNB1-206ENST00000492190 BCL11BQ9C0K0 894 aaPredicted RBP24.02■■□□□ 1.44
LMNB1-206ENST00000492190 EZH2Q15910 746 aaKnown RBP24.01■■□□□ 1.43
LMNB1-206ENST00000492190 ACSBG1Q96GR2 724 aa24.01■■□□□ 1.43
LMNB1-206ENST00000492190 AEBP1Q8IUX7 1158 aa24■■□□□ 1.43
LMNB1-206ENST00000492190 NUP188Q5SRE5 1749 aa24■■□□□ 1.43
LMNB1-206ENST00000492190 TOGARAM1Q9Y4F4 1720 aa24■■□□□ 1.43
LMNB1-206ENST00000492190 ITGB4P16144 1822 aa23.99■■□□□ 1.43
LMNB1-206ENST00000492190 CYP27B1O15528 508 aa23.99■■□□□ 1.43
LMNB1-206ENST00000492190 PPP2R1AP30153 589 aa23.98■■□□□ 1.43
LMNB1-206ENST00000492190 KDRP35968 1356 aa23.96■■□□□ 1.43
LMNB1-206ENST00000492190 PARD3Q8TEW0 1356 aa23.96■■□□□ 1.43
LMNB1-206ENST00000492190 PCDH11XQ9BZA7 1347 aa23.96■■□□□ 1.43
LMNB1-206ENST00000492190 PCDH11YQ9BZA8 1340 aa23.96■■□□□ 1.43
LMNB1-206ENST00000492190 DIAPH1O60610 1272 aaKnown RBP23.94■■□□□ 1.42
LMNB1-206ENST00000492190 SULT6B1Q6IMI4 303 aa23.94■■□□□ 1.42
LMNB1-206ENST00000492190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.94■■□□□ 1.42
LMNB1-206ENST00000492190 PLSCR1O15162 318 aa23.93■■□□□ 1.42
LMNB1-206ENST00000492190 PLEKHG2Q9H7P9 1386 aa23.92■■□□□ 1.42
LMNB1-206ENST00000492190 VIRMAQ69YN4 1812 aaKnown RBP23.92■■□□□ 1.42
LMNB1-206ENST00000492190 SPG7Q9UQ90 795 aa23.92■■□□□ 1.42
LMNB1-206ENST00000492190 PRIM1P49642 420 aaKnown RBP23.91■■□□□ 1.42
LMNB1-206ENST00000492190 PROM2Q8N271 834 aa23.91■■□□□ 1.42
LMNB1-206ENST00000492190 HMOX1P09601 288 aa23.89■■□□□ 1.41
LMNB1-206ENST00000492190 NKX1-1Q15270 411 aaPredicted RBP23.89■■□□□ 1.41
LMNB1-206ENST00000492190 LY75O60449 1722 aa23.89■■□□□ 1.41
LMNB1-206ENST00000492190 PHKG2P15735 406 aa23.88■■□□□ 1.41
LMNB1-206ENST00000492190 SRCAPQ6ZRS2 3230 aa23.87■■□□□ 1.41
LMNB1-206ENST00000492190 SYTL4Q96C24 671 aaPredicted RBP23.87■■□□□ 1.41
LMNB1-206ENST00000492190 PLEKHO1Q53GL0 409 aaPredicted RBP23.86■■□□□ 1.41
LMNB1-206ENST00000492190 IFNL2Q8IZJ0 200 aa23.86■■□□□ 1.41
LMNB1-206ENST00000492190 CFAP53Q96M91 514 aa23.85■■□□□ 1.41
LMNB1-206ENST00000492190 SCN11AQ9UI33 1791 aa23.84■■□□□ 1.41
LMNB1-206ENST00000492190 ZNF316A6NFI3 1004 aaPredicted RBP23.84■■□□□ 1.41
LMNB1-206ENST00000492190 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
LMNB1-206ENST00000492190 TXNRD1Q16881 649 aa23.84■■□□□ 1.41
LMNB1-206ENST00000492190 AMOTQ4VCS5 1084 aa23.83■■□□□ 1.41
LMNB1-206ENST00000492190 ZNF530Q6P9A1 599 aaPredicted RBP23.83■■□□□ 1.41
LMNB1-206ENST00000492190 RALBP1Q15311 655 aa23.82■■□□□ 1.4
LMNB1-206ENST00000492190 PAPPAQ13219 1627 aa23.81■■□□□ 1.4
LMNB1-206ENST00000492190 PSDA5PKW4 1024 aaPredicted RBP23.81■■□□□ 1.4
LMNB1-206ENST00000492190 KDM6AO15550 1401 aaPredicted RBP23.81■■□□□ 1.4
LMNB1-206ENST00000492190 R3HDM1Q15032 1099 aaKnown RBP23.79■■□□□ 1.4
LMNB1-206ENST00000492190 MPRIPQ6WCQ1 1025 aa23.79■■□□□ 1.4
LMNB1-206ENST00000492190 ANO8Q9HCE9 1232 aaPredicted RBP23.79■■□□□ 1.4
LMNB1-206ENST00000492190 TAF1LQ8IZX4 1826 aa23.78■■□□□ 1.4
LMNB1-206ENST00000492190 PIGBQ92521 554 aa23.78■■□□□ 1.4
LMNB1-206ENST00000492190 LRRC4BQ9NT99 713 aa23.78■■□□□ 1.4
LMNB1-206ENST00000492190 MTHFSDQ2M296 383 aaKnown RBP23.77■■□□□ 1.4
LMNB1-206ENST00000492190 RSPH6AQ9H0K4 717 aa23.77■■□□□ 1.4
LMNB1-206ENST00000492190 ADAMTS7Q9UKP4 1686 aa23.76■■□□□ 1.39
LMNB1-206ENST00000492190 KCNQ4P56696 695 aa23.75■■□□□ 1.39
LMNB1-206ENST00000492190 DCAF5Q96JK2 942 aa23.75■■□□□ 1.39
LMNB1-206ENST00000492190 NUDCQ9Y266 331 aa23.75■■□□□ 1.39
LMNB1-206ENST00000492190 TUBGCP6Q96RT7 1819 aa23.75■■□□□ 1.39
LMNB1-206ENST00000492190 U2AF1L5P0DN76 240 aaPredicted RBP23.74■■□□□ 1.39
LMNB1-206ENST00000492190 U2AF1Q01081 240 aaKnown RBP eCLIP23.74■■□□□ 1.39
LMNB1-206ENST00000492190 C1orf141Q5JVX7 400 aa23.74■■□□□ 1.39
LMNB1-206ENST00000492190 PRKRIP1Q9H875 184 aaPredicted RBP23.74■■□□□ 1.39
LMNB1-206ENST00000492190 MYBBP1AQ9BQG0 1328 aaKnown RBP23.74■■□□□ 1.39
LMNB1-206ENST00000492190 HSP90AB1P08238 724 aaKnown RBP23.73■■□□□ 1.39
LMNB1-206ENST00000492190 NBPF14Q5TI25 921 aa23.73■■□□□ 1.39
LMNB1-206ENST00000492190 PHACTR3Q96KR7 559 aa23.73■■□□□ 1.39
LMNB1-206ENST00000492190 ERVV-2B6SEH9 535 aa23.72■■□□□ 1.39
LMNB1-206ENST00000492190 PRKAR2BP31323 418 aa23.72■■□□□ 1.39
LMNB1-206ENST00000492190 AKAP4Q5JQC9 854 aa23.72■■□□□ 1.39
LMNB1-206ENST00000492190 TMOD3Q9NYL9 352 aa23.72■■□□□ 1.39
LMNB1-206ENST00000492190 DLG5Q8TDM6 1919 aa23.72■■□□□ 1.39
LMNB1-206ENST00000492190 CASZ1Q86V15 1759 aa23.71■■□□□ 1.39
LMNB1-206ENST00000492190 C5P01031 1676 aa23.71■■□□□ 1.39
LMNB1-206ENST00000492190 PALLDQ8WX93 1383 aa23.71■■□□□ 1.39
LMNB1-206ENST00000492190 LGR6Q9HBX8 967 aa23.71■■□□□ 1.39
LMNB1-206ENST00000492190 SLC27A3Q5K4L6 730 aa23.7■■□□□ 1.38
LMNB1-206ENST00000492190 ASAP1Q9ULH1 1129 aa23.7■■□□□ 1.38
LMNB1-206ENST00000492190 FCHSD2O94868 740 aa23.69■■□□□ 1.38
LMNB1-206ENST00000492190 SIPA1L3O60292 1781 aaPredicted RBP23.68■■□□□ 1.38
LMNB1-206ENST00000492190 QSER1Q2KHR3 1735 aa23.68■■□□□ 1.38
LMNB1-206ENST00000492190 ZNF827Q17R98 1081 aa23.68■■□□□ 1.38
LMNB1-206ENST00000492190 ATG3Q9NT62 314 aa23.68■■□□□ 1.38
LMNB1-206ENST00000492190 CCNL1Q9UK58 526 aaPredicted RBP23.68■■□□□ 1.38
LMNB1-206ENST00000492190 RNMTO43148 476 aaKnown RBP23.67■■□□□ 1.38
LMNB1-206ENST00000492190 SLC15A2Q16348 729 aa23.67■■□□□ 1.38
LMNB1-206ENST00000492190 MRC1P22897 1456 aa23.67■■□□□ 1.38
LMNB1-206ENST00000492190 CABP4P57796 275 aa23.66■■□□□ 1.38
LMNB1-206ENST00000492190 SMARCC1Q92922 1105 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms