RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 PRR36Q9H6K5 1346 aa12.18□□□□□ -0.46
CMSS1-206ENST00000491299 MAP3K9P80192 1104 aa12.18□□□□□ -0.46
CMSS1-206ENST00000491299 TOPAZ1Q8N9V7 1692 aa12.18□□□□□ -0.46
CMSS1-206ENST00000491299 TRPM3Q9HCF6 1732 aaPredicted RBP12.17□□□□□ -0.46
CMSS1-206ENST00000491299 QTRT2Q9H974 415 aaKnown RBP12.17□□□□□ -0.46
CMSS1-206ENST00000491299 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
CMSS1-206ENST00000491299 ABCA3Q99758 1704 aa12.17□□□□□ -0.46
CMSS1-206ENST00000491299 RBM6P78332 1123 aaKnown RBP12.16□□□□□ -0.46
CMSS1-206ENST00000491299 TRPC5Q9UL62 973 aaPredicted RBP12.16□□□□□ -0.46
CMSS1-206ENST00000491299 ALS2Q96Q42 1657 aa12.16□□□□□ -0.46
CMSS1-206ENST00000491299 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
CMSS1-206ENST00000491299 EVC2Q86UK5 1308 aa12.15□□□□□ -0.46
CMSS1-206ENST00000491299 PSDA5PKW4 1024 aaPredicted RBP12.15□□□□□ -0.46
CMSS1-206ENST00000491299 EVI5O60447 810 aa12.15□□□□□ -0.46
CMSS1-206ENST00000491299 FNBP4Q8N3X1 1017 aaPredicted RBP12.15□□□□□ -0.46
CMSS1-206ENST00000491299 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.14□□□□□ -0.47
CMSS1-206ENST00000491299 PPIP5K1Q6PFW1 1433 aa12.14□□□□□ -0.47
CMSS1-206ENST00000491299 CAMK2BQ13554 666 aa12.14□□□□□ -0.47
CMSS1-206ENST00000491299 CARD11Q9BXL7 1154 aa12.14□□□□□ -0.47
CMSS1-206ENST00000491299 WDR70Q9NW82 654 aa12.14□□□□□ -0.47
CMSS1-206ENST00000491299 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
CMSS1-206ENST00000491299 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
CMSS1-206ENST00000491299 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
CMSS1-206ENST00000491299 ACEP12821 1306 aa12.12□□□□□ -0.47
CMSS1-206ENST00000491299 NWD2Q9ULI1 1742 aa12.12□□□□□ -0.47
CMSS1-206ENST00000491299 DPYSL4O14531 572 aa12.12□□□□□ -0.47
CMSS1-206ENST00000491299 NBPF8Q3BBV2 869 aa12.12□□□□□ -0.47
CMSS1-206ENST00000491299 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
CMSS1-206ENST00000491299 POLR3AO14802 1390 aaPredicted RBP12.12□□□□□ -0.47
CMSS1-206ENST00000491299 PLEKHG3A1L390 1219 aa12.11□□□□□ -0.47
CMSS1-206ENST00000491299 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
CMSS1-206ENST00000491299 ATRNO75882 1429 aa12.11□□□□□ -0.47
CMSS1-206ENST00000491299 BCL9LQ86UU0 1499 aa12.1□□□□□ -0.47
CMSS1-206ENST00000491299 UNC5CLQ8IV45 518 aa12.1□□□□□ -0.47
CMSS1-206ENST00000491299 SLIT2O94813 1529 aa12.1□□□□□ -0.47
CMSS1-206ENST00000491299 RGS12O14924 1447 aa12.1□□□□□ -0.47
CMSS1-206ENST00000491299 COL14A1Q05707 1796 aaKnown RBP12.1□□□□□ -0.47
CMSS1-206ENST00000491299 BRD4O60885 1362 aaPredicted RBP12.09□□□□□ -0.47
CMSS1-206ENST00000491299 ATAD2Q6PL18 1390 aa12.09□□□□□ -0.47
CMSS1-206ENST00000491299 SPNS2Q8IVW8 549 aa12.09□□□□□ -0.47
CMSS1-206ENST00000491299 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
CMSS1-206ENST00000491299 AXIN2Q9Y2T1 843 aa12.09□□□□□ -0.47
CMSS1-206ENST00000491299 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
CMSS1-206ENST00000491299 CLSPNQ9HAW4 1339 aa12.09□□□□□ -0.47
CMSS1-206ENST00000491299 CRYBG1Q9Y4K1 1723 aa12.08□□□□□ -0.47
CMSS1-206ENST00000491299 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
CMSS1-206ENST00000491299 SBNO2Q9Y2G9 1366 aa12.08□□□□□ -0.48
CMSS1-206ENST00000491299 E2F4Q16254 413 aa12.08□□□□□ -0.48
CMSS1-206ENST00000491299 ABTB2Q8N961 1025 aa12.08□□□□□ -0.48
CMSS1-206ENST00000491299 GJD4Q96KN9 370 aaPredicted RBP12.08□□□□□ -0.48
CMSS1-206ENST00000491299 CABP1Q9NZU7 370 aa12.08□□□□□ -0.48
CMSS1-206ENST00000491299 PBX2P40425 430 aa12.07□□□□□ -0.48
CMSS1-206ENST00000491299 POTEEQ6S8J3 1075 aa12.07□□□□□ -0.48
CMSS1-206ENST00000491299 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
CMSS1-206ENST00000491299 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
CMSS1-206ENST00000491299 NUTM2GQ5VZR2 741 aa12.06□□□□□ -0.48
CMSS1-206ENST00000491299 NLRP13Q86W25 1043 aa12.06□□□□□ -0.48
CMSS1-206ENST00000491299 AKAP12Q02952 1782 aa12.05□□□□□ -0.48
CMSS1-206ENST00000491299 USP6P35125 1406 aa12.05□□□□□ -0.48
CMSS1-206ENST00000491299 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
CMSS1-206ENST00000491299 ANKRD13DQ6ZTN6 518 aa12.05□□□□□ -0.48
CMSS1-206ENST00000491299 ANO8Q9HCE9 1232 aaPredicted RBP12.05□□□□□ -0.48
CMSS1-206ENST00000491299 BTG4Q9NY30 223 aa12.05□□□□□ -0.48
CMSS1-206ENST00000491299 TIMELESSQ9UNS1 1208 aa12.05□□□□□ -0.48
CMSS1-206ENST00000491299 NRAPQ86VF7 1730 aa12.05□□□□□ -0.48
CMSS1-206ENST00000491299 A0A0G2JS52 829 aa12.04□□□□□ -0.48
CMSS1-206ENST00000491299 FOSBP53539 338 aa12.04□□□□□ -0.48
CMSS1-206ENST00000491299 LSM11P83369 360 aaKnown RBP eCLIP12.04□□□□□ -0.48
CMSS1-206ENST00000491299 MYT1Q01538 1121 aa12.04□□□□□ -0.48
CMSS1-206ENST00000491299 VPS72Q15906 364 aa12.04□□□□□ -0.48
CMSS1-206ENST00000491299 GLI3P10071 1580 aa12.04□□□□□ -0.48
CMSS1-206ENST00000491299 NRKQ7Z2Y5 1582 aa12.04□□□□□ -0.48
CMSS1-206ENST00000491299 KIAA0232Q92628 1395 aa12.03□□□□□ -0.48
CMSS1-206ENST00000491299 ARHGAP33O14559 1287 aa12.02□□□□□ -0.49
CMSS1-206ENST00000491299 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.49
CMSS1-206ENST00000491299 TMC1Q8TDI8 760 aa12.02□□□□□ -0.49
CMSS1-206ENST00000491299 MON2Q7Z3U7 1717 aa12.02□□□□□ -0.49
CMSS1-206ENST00000491299 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.49
CMSS1-206ENST00000491299 PSEN2P49810 448 aa12.01□□□□□ -0.49
CMSS1-206ENST00000491299 HDGFL2Q7Z4V5 671 aaPredicted RBP12.01□□□□□ -0.49
CMSS1-206ENST00000491299 KCNK17Q96T54 332 aa12.01□□□□□ -0.49
CMSS1-206ENST00000491299 USP19O94966 1318 aa12.01□□□□□ -0.49
CMSS1-206ENST00000491299 TTC21AQ8NDW8 1320 aa12.01□□□□□ -0.49
CMSS1-206ENST00000491299 PIK3C2AO00443 1686 aa12□□□□□ -0.49
CMSS1-206ENST00000491299 ST20-MTHFSA0A0A6YYL1 179 aa12□□□□□ -0.49
CMSS1-206ENST00000491299 EVA1CP58658 441 aa12□□□□□ -0.49
CMSS1-206ENST00000491299 MMRN1Q13201 1228 aa12□□□□□ -0.49
CMSS1-206ENST00000491299 CHRNA2Q15822 529 aa12□□□□□ -0.49
CMSS1-206ENST00000491299 STRN4Q9NRL3 753 aa12□□□□□ -0.49
CMSS1-206ENST00000491299 USP47Q96K76 1375 aa12□□□□□ -0.49
CMSS1-206ENST00000491299 BRWD3Q6RI45 1802 aa12□□□□□ -0.49
CMSS1-206ENST00000491299 ZBTB7CA1YPR0 619 aa11.99□□□□□ -0.49
CMSS1-206ENST00000491299 GCP02774 474 aa11.99□□□□□ -0.49
CMSS1-206ENST00000491299 PUS7Q96PZ0 661 aaKnown RBP11.99□□□□□ -0.49
CMSS1-206ENST00000491299 TERF2IPQ9NYB0 399 aa11.99□□□□□ -0.49
CMSS1-206ENST00000491299 CPDO75976 1380 aa11.99□□□□□ -0.49
CMSS1-206ENST00000491299 NINLQ9Y2I6 1382 aa11.99□□□□□ -0.49
CMSS1-206ENST00000491299 SLIT3O75094 1523 aa11.98□□□□□ -0.49
CMSS1-206ENST00000491299 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
CMSS1-206ENST00000491299 TTC21BQ7Z4L5 1316 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms