RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 GCC1Q96CN9 775 aa18.87■□□□□ 0.61
COL9A1-208ENST00000489611 THUMPD2Q9BTF0 503 aaKnown RBP18.87■□□□□ 0.61
COL9A1-208ENST00000489611 MST1RQ04912 1400 aa18.87■□□□□ 0.61
COL9A1-208ENST00000489611 CHL1O00533 1208 aa18.86■□□□□ 0.61
COL9A1-208ENST00000489611 NBR1Q14596 966 aa18.86■□□□□ 0.61
COL9A1-208ENST00000489611 CADPS2Q86UW7 1296 aa18.86■□□□□ 0.61
COL9A1-208ENST00000489611 DCCP43146 1447 aa18.86■□□□□ 0.61
COL9A1-208ENST00000489611 ZBTB7BO15156 539 aaPredicted RBP18.86■□□□□ 0.61
COL9A1-208ENST00000489611 BECN1Q14457 450 aa18.86■□□□□ 0.61
COL9A1-208ENST00000489611 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
COL9A1-208ENST00000489611 NLRP6P59044 892 aa18.85■□□□□ 0.61
COL9A1-208ENST00000489611 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
COL9A1-208ENST00000489611 ABTB2Q8N961 1025 aa18.85■□□□□ 0.61
COL9A1-208ENST00000489611 HTATSF1O43719 755 aaKnown RBP18.84■□□□□ 0.61
COL9A1-208ENST00000489611 TSPYL6Q8N831 410 aa18.84■□□□□ 0.61
COL9A1-208ENST00000489611 USP19O94966 1318 aa18.84■□□□□ 0.61
COL9A1-208ENST00000489611 NUCB1Q02818 461 aa18.84■□□□□ 0.61
COL9A1-208ENST00000489611 IGSF1Q8N6C5 1336 aa18.83■□□□□ 0.61
COL9A1-208ENST00000489611 XIRP1Q702N8 1843 aaKnown RBP18.83■□□□□ 0.6
COL9A1-208ENST00000489611 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
COL9A1-208ENST00000489611 C8orf58Q8NAV2 365 aa18.82■□□□□ 0.6
COL9A1-208ENST00000489611 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
COL9A1-208ENST00000489611 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
COL9A1-208ENST00000489611 AMPHP49418 695 aa18.82■□□□□ 0.6
COL9A1-208ENST00000489611 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
COL9A1-208ENST00000489611 PTPRCP08575 1304 aa18.81■□□□□ 0.6
COL9A1-208ENST00000489611 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
COL9A1-208ENST00000489611 RTF1Q92541 710 aaKnown RBP18.81■□□□□ 0.6
COL9A1-208ENST00000489611 EIF5BO60841 1220 aaKnown RBP18.8■□□□□ 0.6
COL9A1-208ENST00000489611 KRT28Q7Z3Y7 464 aa18.8■□□□□ 0.6
COL9A1-208ENST00000489611 TBC1D32Q96NH3 1257 aa18.8■□□□□ 0.6
COL9A1-208ENST00000489611 SOS1Q07889 1333 aaPredicted RBP18.8■□□□□ 0.6
COL9A1-208ENST00000489611 CRB1P82279 1406 aa18.8■□□□□ 0.6
COL9A1-208ENST00000489611 MARF1Q9Y4F3 1742 aaKnown RBP18.79■□□□□ 0.6
COL9A1-208ENST00000489611 INTS3Q68E01 1043 aaKnown RBP18.79■□□□□ 0.6
COL9A1-208ENST00000489611 CHD1LQ86WJ1 897 aa18.79■□□□□ 0.6
COL9A1-208ENST00000489611 BABAM1Q9NWV8 329 aa18.78■□□□□ 0.6
COL9A1-208ENST00000489611 ELL2O00472 640 aaPredicted RBP18.77■□□□□ 0.6
COL9A1-208ENST00000489611 DCTN1Q14203 1278 aa18.77■□□□□ 0.6
COL9A1-208ENST00000489611 LMOD2Q6P5Q4 547 aa18.77■□□□□ 0.6
COL9A1-208ENST00000489611 PLEKHG5O94827 1062 aa18.76■□□□□ 0.59
COL9A1-208ENST00000489611 SEC24BO95487 1268 aa18.76■□□□□ 0.59
COL9A1-208ENST00000489611 LRRC37A3O60309 1634 aa18.76■□□□□ 0.59
COL9A1-208ENST00000489611 KIF1AQ12756 1690 aa18.76■□□□□ 0.59
COL9A1-208ENST00000489611 BRINP3Q76B58 766 aa18.75■□□□□ 0.59
COL9A1-208ENST00000489611 SLAIN2Q9P270 581 aa18.75■□□□□ 0.59
COL9A1-208ENST00000489611 BMP2KLQ5H9B9 411 aa18.74■□□□□ 0.59
COL9A1-208ENST00000489611 MCM10Q7L590 875 aa18.74■□□□□ 0.59
COL9A1-208ENST00000489611 EYA1Q99502 592 aa18.74■□□□□ 0.59
COL9A1-208ENST00000489611 CACNA1FO60840 1977 aa18.74■□□□□ 0.59
COL9A1-208ENST00000489611 HOXC9P31274 260 aa18.74■□□□□ 0.59
COL9A1-208ENST00000489611 MTHFSDQ2M296 383 aaKnown RBP18.74■□□□□ 0.59
COL9A1-208ENST00000489611 PHRF1Q9P1Y6 1649 aaKnown RBP18.73■□□□□ 0.59
COL9A1-208ENST00000489611 DEKP35659 375 aaKnown RBP18.73■□□□□ 0.59
COL9A1-208ENST00000489611 RPAP2Q8IXW5 612 aaPredicted RBP18.72■□□□□ 0.59
COL9A1-208ENST00000489611 NPHP3Q7Z494 1330 aa18.72■□□□□ 0.59
COL9A1-208ENST00000489611 KCNH5Q8NCM2 988 aa18.71■□□□□ 0.59
COL9A1-208ENST00000489611 CHMP4AQ9BY43 222 aa18.71■□□□□ 0.59
COL9A1-208ENST00000489611 TSPYL4Q9UJ04 414 aa18.71■□□□□ 0.59
COL9A1-208ENST00000489611 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
COL9A1-208ENST00000489611 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
COL9A1-208ENST00000489611 RGS12O14924 1447 aa18.7■□□□□ 0.58
COL9A1-208ENST00000489611 LTN1O94822 1766 aa18.7■□□□□ 0.58
COL9A1-208ENST00000489611 C22orf23Q9BZE7 217 aa18.7■□□□□ 0.58
COL9A1-208ENST00000489611 ANKRD45Q5TZF3 282 aa18.69■□□□□ 0.58
COL9A1-208ENST00000489611 LNPKQ9C0E8 428 aa18.69■□□□□ 0.58
COL9A1-208ENST00000489611 SLC4A3P48751 1232 aa18.68■□□□□ 0.58
COL9A1-208ENST00000489611 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
COL9A1-208ENST00000489611 GCP02774 474 aa18.68■□□□□ 0.58
COL9A1-208ENST00000489611 NFKBIBQ15653 356 aa18.68■□□□□ 0.58
COL9A1-208ENST00000489611 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
COL9A1-208ENST00000489611 DCTPP1Q9H773 170 aa18.68■□□□□ 0.58
COL9A1-208ENST00000489611 ZBTB7CA1YPR0 619 aa18.67■□□□□ 0.58
COL9A1-208ENST00000489611 CCT4P50991 539 aaKnown RBP18.67■□□□□ 0.58
COL9A1-208ENST00000489611 SIRT2Q8IXJ6 389 aa18.67■□□□□ 0.58
COL9A1-208ENST00000489611 NFAT5O94916 1531 aa18.67■□□□□ 0.58
COL9A1-208ENST00000489611 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
COL9A1-208ENST00000489611 IP6K1Q92551 441 aa18.66■□□□□ 0.58
COL9A1-208ENST00000489611 STK31Q9BXU1 1019 aa18.66■□□□□ 0.58
COL9A1-208ENST00000489611 PXDNQ92626 1479 aa18.66■□□□□ 0.58
COL9A1-208ENST00000489611 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
COL9A1-208ENST00000489611 RBM25P49756 843 aaKnown RBP18.65■□□□□ 0.58
COL9A1-208ENST00000489611 CCDC30Q5VVM6 783 aa18.65■□□□□ 0.58
COL9A1-208ENST00000489611 HMMRO75330 724 aa18.64■□□□□ 0.58
COL9A1-208ENST00000489611 ATP10DQ9P241 1426 aa18.64■□□□□ 0.58
COL9A1-208ENST00000489611 SPATA31A3Q5VYP0 1347 aa18.64■□□□□ 0.57
COL9A1-208ENST00000489611 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
COL9A1-208ENST00000489611 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
COL9A1-208ENST00000489611 FAM208AQ9UK61 1670 aaKnown RBP18.63■□□□□ 0.57
COL9A1-208ENST00000489611 TNS3Q68CZ2 1445 aa18.63■□□□□ 0.57
COL9A1-208ENST00000489611 MFAP1P55081 439 aaKnown RBP18.63■□□□□ 0.57
COL9A1-208ENST00000489611 LTV1Q96GA3 475 aaPredicted RBP18.63■□□□□ 0.57
COL9A1-208ENST00000489611 N4BP2Q86UW6 1770 aaPredicted RBP18.63■□□□□ 0.57
COL9A1-208ENST00000489611 SLIT3O75094 1523 aa18.63■□□□□ 0.57
COL9A1-208ENST00000489611 TAF7Q15545 349 aaPredicted RBP18.62■□□□□ 0.57
COL9A1-208ENST00000489611 CABLES1Q8TDN4 633 aa18.62■□□□□ 0.57
COL9A1-208ENST00000489611 KRT24Q2M2I5 525 aa18.62■□□□□ 0.57
COL9A1-208ENST00000489611 SOS2Q07890 1332 aaPredicted RBP18.62■□□□□ 0.57
COL9A1-208ENST00000489611 PXDNLA1KZ92 1463 aa18.61■□□□□ 0.57
COL9A1-208ENST00000489611 ARHGEF25Q86VW2 580 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms