RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
GABRE-210ENST00000489333 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
GABRE-210ENST00000489333 SF3B2Q13435 895 aaKnown RBP11.01□□□□□ -0.65
GABRE-210ENST00000489333 C20orf194Q5TEA3 1177 aa11.01□□□□□ -0.65
GABRE-210ENST00000489333 SPDYE1Q8NFV5 336 aaPredicted RBP11.01□□□□□ -0.65
GABRE-210ENST00000489333 PRR36Q9H6K5 1346 aa11.01□□□□□ -0.65
GABRE-210ENST00000489333 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
GABRE-210ENST00000489333 BECN1Q14457 450 aa11□□□□□ -0.65
GABRE-210ENST00000489333 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
GABRE-210ENST00000489333 NGDNQ8NEJ9 315 aaKnown RBP11□□□□□ -0.65
GABRE-210ENST00000489333 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
GABRE-210ENST00000489333 WASLO00401 505 aaPredicted RBP10.99□□□□□ -0.65
GABRE-210ENST00000489333 DEKP35659 375 aaKnown RBP10.99□□□□□ -0.65
GABRE-210ENST00000489333 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
GABRE-210ENST00000489333 ZKSCAN2Q63HK3 967 aa10.99□□□□□ -0.65
GABRE-210ENST00000489333 KRT27Q7Z3Y8 459 aa10.99□□□□□ -0.65
GABRE-210ENST00000489333 BTG4Q9NY30 223 aa10.99□□□□□ -0.65
GABRE-210ENST00000489333 FCHSD2O94868 740 aa10.98□□□□□ -0.65
GABRE-210ENST00000489333 U2AF1L5P0DN76 240 aaPredicted RBP10.98□□□□□ -0.65
GABRE-210ENST00000489333 U2AF1Q01081 240 aaKnown RBP eCLIP10.98□□□□□ -0.65
GABRE-210ENST00000489333 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
GABRE-210ENST00000489333 NPM2Q86SE8 214 aaKnown RBP10.98□□□□□ -0.65
GABRE-210ENST00000489333 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
GABRE-210ENST00000489333 A0A1W2PP64 1363 aa10.98□□□□□ -0.65
GABRE-210ENST00000489333 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
GABRE-210ENST00000489333 BCAR3O75815 825 aa10.97□□□□□ -0.65
GABRE-210ENST00000489333 ALDH1L2Q3SY69 923 aa10.97□□□□□ -0.65
GABRE-210ENST00000489333 C8orf34Q49A92 452 aa10.97□□□□□ -0.65
GABRE-210ENST00000489333 DDX19BQ9UMR2 479 aa10.97□□□□□ -0.65
GABRE-210ENST00000489333 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
GABRE-210ENST00000489333 RGPD1P0DJD0 1748 aa10.97□□□□□ -0.65
GABRE-210ENST00000489333 TOPAZ1Q8N9V7 1692 aa10.96□□□□□ -0.65
GABRE-210ENST00000489333 PPIP5K1Q6PFW1 1433 aa10.96□□□□□ -0.65
GABRE-210ENST00000489333 ONECUT3O60422 494 aaPredicted RBP10.96□□□□□ -0.65
GABRE-210ENST00000489333 DIAPH1O60610 1272 aaKnown RBP10.96□□□□□ -0.65
GABRE-210ENST00000489333 BRPF1P55201 1214 aaPredicted RBP10.96□□□□□ -0.65
GABRE-210ENST00000489333 LMOD3Q0VAK6 560 aa10.96□□□□□ -0.65
GABRE-210ENST00000489333 CFAP44Q96MT7 982 aa10.96□□□□□ -0.65
GABRE-210ENST00000489333 SRCAPQ6ZRS2 3230 aa10.96□□□□□ -0.66
GABRE-210ENST00000489333 FXR2P51116 673 aaKnown RBP eCLIP10.95□□□□□ -0.66
GABRE-210ENST00000489333 MVPQ14764 893 aaKnown RBP10.95□□□□□ -0.66
GABRE-210ENST00000489333 NUTM2GQ5VZR2 741 aa10.95□□□□□ -0.66
GABRE-210ENST00000489333 POTEHQ6S545 545 aa10.95□□□□□ -0.66
GABRE-210ENST00000489333 FTSJ3Q8IY81 847 aaKnown RBP10.95□□□□□ -0.66
GABRE-210ENST00000489333 NUDT16Q96DE0 195 aaKnown RBP10.95□□□□□ -0.66
GABRE-210ENST00000489333 PRDM11Q9NQV5 511 aa10.95□□□□□ -0.66
GABRE-210ENST00000489333 AATKQ6ZMQ8 1374 aa10.94□□□□□ -0.66
GABRE-210ENST00000489333 TMPOP42166 694 aaKnown RBP10.94□□□□□ -0.66
GABRE-210ENST00000489333 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
GABRE-210ENST00000489333 NBR1Q14596 966 aa10.94□□□□□ -0.66
GABRE-210ENST00000489333 FAM182BQ5T319 152 aa10.94□□□□□ -0.66
GABRE-210ENST00000489333 DZIP1LQ8IYY4 767 aaKnown RBP10.94□□□□□ -0.66
GABRE-210ENST00000489333 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
GABRE-210ENST00000489333 PLEKHF1Q96S99 279 aa10.94□□□□□ -0.66
GABRE-210ENST00000489333 CDK19Q9BWU1 502 aa10.94□□□□□ -0.66
GABRE-210ENST00000489333 CABP2Q9NPB3 220 aa10.94□□□□□ -0.66
GABRE-210ENST00000489333 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
GABRE-210ENST00000489333 THSD7AQ9UPZ6 1657 aa10.94□□□□□ -0.66
GABRE-210ENST00000489333 EDC4Q6P2E9 1401 aaKnown RBP10.93□□□□□ -0.66
GABRE-210ENST00000489333 KIAA0232Q92628 1395 aa10.93□□□□□ -0.66
GABRE-210ENST00000489333 TNS1Q9HBL0 1735 aaKnown RBP10.93□□□□□ -0.66
GABRE-210ENST00000489333 SPATA31A5Q5VU36 1347 aa10.93□□□□□ -0.66
GABRE-210ENST00000489333 SPATA31A7Q8IWB4 1347 aa10.93□□□□□ -0.66
GABRE-210ENST00000489333 FYB1O15117 783 aa10.93□□□□□ -0.66
GABRE-210ENST00000489333 BAG6P46379 1132 aa10.93□□□□□ -0.66
GABRE-210ENST00000489333 CHRNA2Q15822 529 aa10.93□□□□□ -0.66
GABRE-210ENST00000489333 ARHGAP45Q92619 1136 aa10.93□□□□□ -0.66
GABRE-210ENST00000489333 STRN4Q9NRL3 753 aa10.93□□□□□ -0.66
GABRE-210ENST00000489333 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
GABRE-210ENST00000489333 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
GABRE-210ENST00000489333 ZC3H6P61129 1189 aaKnown RBP10.92□□□□□ -0.66
GABRE-210ENST00000489333 FRAT1Q92837 279 aaPredicted RBP10.92□□□□□ -0.66
GABRE-210ENST00000489333 BCL11AQ9H165 835 aa10.92□□□□□ -0.66
GABRE-210ENST00000489333 COG6Q9Y2V7 657 aa10.92□□□□□ -0.66
GABRE-210ENST00000489333 LRP5O75197 1615 aa10.91□□□□□ -0.66
GABRE-210ENST00000489333 NRKQ7Z2Y5 1582 aa10.91□□□□□ -0.66
GABRE-210ENST00000489333 TNNT2P45379 298 aaPredicted RBP10.91□□□□□ -0.66
GABRE-210ENST00000489333 ATF7IPQ6VMQ6 1270 aa10.91□□□□□ -0.66
GABRE-210ENST00000489333 ACEP12821 1306 aa10.9□□□□□ -0.66
GABRE-210ENST00000489333 IGHDP01880 384 aa10.9□□□□□ -0.66
GABRE-210ENST00000489333 RGS3P49796 1198 aa10.9□□□□□ -0.66
GABRE-210ENST00000489333 EN1Q05925 392 aaPredicted RBP10.9□□□□□ -0.66
GABRE-210ENST00000489333 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
GABRE-210ENST00000489333 SMC4Q9NTJ3 1288 aa10.9□□□□□ -0.66
GABRE-210ENST00000489333 KIF24Q5T7B8 1368 aa10.9□□□□□ -0.67
GABRE-210ENST00000489333 SPATA31A1Q5TZJ5 1347 aa10.89□□□□□ -0.67
GABRE-210ENST00000489333 U2SURPO15042 1029 aaKnown RBP10.89□□□□□ -0.67
GABRE-210ENST00000489333 EVA1CP58658 441 aa10.89□□□□□ -0.67
GABRE-210ENST00000489333 GNAI1P63096 354 aa10.89□□□□□ -0.67
GABRE-210ENST00000489333 PANK1Q8TE04 598 aa10.89□□□□□ -0.67
GABRE-210ENST00000489333 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
GABRE-210ENST00000489333 CPSF1Q10570 1443 aaKnown RBP10.89□□□□□ -0.67
GABRE-210ENST00000489333 MON2Q7Z3U7 1717 aa10.89□□□□□ -0.67
GABRE-210ENST00000489333 RIPK4P57078 832 aa10.88□□□□□ -0.67
GABRE-210ENST00000489333 ABTB2Q8N961 1025 aa10.88□□□□□ -0.67
GABRE-210ENST00000489333 SSH2Q76I76 1423 aa10.87□□□□□ -0.67
GABRE-210ENST00000489333 ZBTB7CA1YPR0 619 aa10.87□□□□□ -0.67
GABRE-210ENST00000489333 GCC1Q96CN9 775 aa10.87□□□□□ -0.67
GABRE-210ENST00000489333 GGNBP2Q9H3C7 697 aa10.87□□□□□ -0.67
GABRE-210ENST00000489333 IFT57Q9NWB7 429 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms