RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 VWDEQ8N2E2 1590 aa9.86□□□□□ -0.83
SEC22C-215ENST00000487701 USB1Q9BQ65 265 aaKnown RBP9.86□□□□□ -0.83
SEC22C-215ENST00000487701 TBC1D2Q9BYX2 928 aa9.86□□□□□ -0.83
SEC22C-215ENST00000487701 FCF1Q9Y324 198 aaKnown RBP9.86□□□□□ -0.83
SEC22C-215ENST00000487701 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
SEC22C-215ENST00000487701 UNC13BO14795 1591 aa9.85□□□□□ -0.83
SEC22C-215ENST00000487701 C6orf229H3BNL8 230 aa9.85□□□□□ -0.83
SEC22C-215ENST00000487701 SLC19A1P41440 591 aa9.85□□□□□ -0.83
SEC22C-215ENST00000487701 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
SEC22C-215ENST00000487701 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
SEC22C-215ENST00000487701 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
SEC22C-215ENST00000487701 ROCK1Q13464 1354 aa9.85□□□□□ -0.83
SEC22C-215ENST00000487701 NPATQ14207 1427 aa9.84□□□□□ -0.83
SEC22C-215ENST00000487701 DIXDC1Q155Q3 683 aa9.84□□□□□ -0.83
SEC22C-215ENST00000487701 ESF1Q9H501 851 aaKnown RBP9.84□□□□□ -0.83
SEC22C-215ENST00000487701 PZPP20742 1482 aa9.84□□□□□ -0.83
SEC22C-215ENST00000487701 STRCQ7RTU9 1775 aa9.83□□□□□ -0.84
SEC22C-215ENST00000487701 ANKRD50Q9ULJ7 1429 aa9.82□□□□□ -0.84
SEC22C-215ENST00000487701 ITGAEP38570 1179 aa9.82□□□□□ -0.84
SEC22C-215ENST00000487701 PLA2G2CQ5R387 149 aa9.82□□□□□ -0.84
SEC22C-215ENST00000487701 PCDHGC3Q9UN70 934 aa9.82□□□□□ -0.84
SEC22C-215ENST00000487701 UHRF1BP1Q6BDS2 1440 aa9.82□□□□□ -0.84
SEC22C-215ENST00000487701 TET3O43151 1660 aa9.81□□□□□ -0.84
SEC22C-215ENST00000487701 SPATA31D1Q6ZQQ2 1576 aa9.81□□□□□ -0.84
SEC22C-215ENST00000487701 CEP170BQ9Y4F5 1589 aaPredicted RBP9.81□□□□□ -0.84
SEC22C-215ENST00000487701 GPBP1L1Q9HC44 474 aaPredicted RBP9.81□□□□□ -0.84
SEC22C-215ENST00000487701 IQGAP3Q86VI3 1631 aa9.81□□□□□ -0.84
SEC22C-215ENST00000487701 EFCAB6Q5THR3 1501 aa9.81□□□□□ -0.84
SEC22C-215ENST00000487701 LMTK2Q8IWU2 1503 aa9.81□□□□□ -0.84
SEC22C-215ENST00000487701 WASHC2CQ9Y4E1 1318 aa9.81□□□□□ -0.84
SEC22C-215ENST00000487701 TPRNQ4KMQ1 711 aa9.8□□□□□ -0.84
SEC22C-215ENST00000487701 LIAT1Q6ZQX7 453 aa9.8□□□□□ -0.84
SEC22C-215ENST00000487701 TRIM67Q6ZTA4 783 aa9.8□□□□□ -0.84
SEC22C-215ENST00000487701 RETREG3Q86VR2 466 aa9.8□□□□□ -0.84
SEC22C-215ENST00000487701 E9PCH4 1651 aa9.8□□□□□ -0.84
SEC22C-215ENST00000487701 ERVK-7P63135 1459 aa9.79□□□□□ -0.84
SEC22C-215ENST00000487701 HSPA2P54652 639 aa9.79□□□□□ -0.84
SEC22C-215ENST00000487701 SPRYD7Q5W111 196 aa9.79□□□□□ -0.84
SEC22C-215ENST00000487701 RSBN1LQ6PCB5 846 aaPredicted RBP9.79□□□□□ -0.84
SEC22C-215ENST00000487701 KDM4CQ9H3R0 1056 aa9.79□□□□□ -0.84
SEC22C-215ENST00000487701 MYO5BQ9ULV0 1848 aa9.78□□□□□ -0.84
SEC22C-215ENST00000487701 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
SEC22C-215ENST00000487701 MMP16P51512 607 aa9.78□□□□□ -0.84
SEC22C-215ENST00000487701 CSPP1Q1MSJ5 1256 aa9.78□□□□□ -0.84
SEC22C-215ENST00000487701 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
SEC22C-215ENST00000487701 CCDC24Q8N4L8 307 aa9.78□□□□□ -0.84
SEC22C-215ENST00000487701 NAIPQ13075 1403 aa9.78□□□□□ -0.84
SEC22C-215ENST00000487701 POLR1AO95602 1720 aaPredicted RBP9.78□□□□□ -0.84
SEC22C-215ENST00000487701 UBR1Q8IWV7 1749 aa9.77□□□□□ -0.85
SEC22C-215ENST00000487701 SYNMO15061 1565 aa9.77□□□□□ -0.85
SEC22C-215ENST00000487701 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.85
SEC22C-215ENST00000487701 JUNDP17535 347 aa9.77□□□□□ -0.85
SEC22C-215ENST00000487701 MTMR2Q13614 643 aa9.77□□□□□ -0.85
SEC22C-215ENST00000487701 RIC3Q7Z5B4 369 aa9.77□□□□□ -0.85
SEC22C-215ENST00000487701 ZNF598Q86UK7 904 aaKnown RBP9.77□□□□□ -0.85
SEC22C-215ENST00000487701 A2ML1A8K2U0 1454 aa9.77□□□□□ -0.85
SEC22C-215ENST00000487701 TNRQ92752 1358 aa9.76□□□□□ -0.85
SEC22C-215ENST00000487701 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
SEC22C-215ENST00000487701 PIK3C2BO00750 1634 aa9.76□□□□□ -0.85
SEC22C-215ENST00000487701 SPTLC1O15269 473 aa9.76□□□□□ -0.85
SEC22C-215ENST00000487701 ZBTB24O43167 697 aaPredicted RBP9.76□□□□□ -0.85
SEC22C-215ENST00000487701 ZNF697Q5TEC3 545 aa9.76□□□□□ -0.85
SEC22C-215ENST00000487701 MYSM1Q5VVJ2 828 aa9.76□□□□□ -0.85
SEC22C-215ENST00000487701 KANK1Q14678 1352 aa9.75□□□□□ -0.85
SEC22C-215ENST00000487701 PCDHB15Q9Y5E8 787 aa9.75□□□□□ -0.85
SEC22C-215ENST00000487701 NLRP1Q9C000 1473 aa9.74□□□□□ -0.85
SEC22C-215ENST00000487701 SPHKAPQ2M3C7 1700 aa9.74□□□□□ -0.85
SEC22C-215ENST00000487701 SPDYE5A6NIY4 337 aa9.74□□□□□ -0.85
SEC22C-215ENST00000487701 GJA5P36382 358 aa9.74□□□□□ -0.85
SEC22C-215ENST00000487701 PRR7Q8TB68 274 aa9.74□□□□□ -0.85
SEC22C-215ENST00000487701 ZBTB3Q9H5J0 574 aa9.74□□□□□ -0.85
SEC22C-215ENST00000487701 KDM5AP29375 1690 aaKnown RBP9.74□□□□□ -0.85
SEC22C-215ENST00000487701 RPRD2Q5VT52 1461 aaKnown RBP9.73□□□□□ -0.85
SEC22C-215ENST00000487701 RPIAP49247 311 aa9.73□□□□□ -0.85
SEC22C-215ENST00000487701 NEUROD2Q15784 382 aa9.73□□□□□ -0.85
SEC22C-215ENST00000487701 RSPH6AQ9H0K4 717 aa9.73□□□□□ -0.85
SEC22C-215ENST00000487701 LIMD1Q9UGP4 676 aa9.73□□□□□ -0.85
SEC22C-215ENST00000487701 NOS1P29475 1434 aa9.73□□□□□ -0.85
SEC22C-215ENST00000487701 NEURL4Q96JN8 1562 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 UGGT1Q9NYU2 1555 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 CD2BP2O95400 341 aaKnown RBP9.72□□□□□ -0.85
SEC22C-215ENST00000487701 CLK2P49760 499 aaKnown RBP9.72□□□□□ -0.85
SEC22C-215ENST00000487701 PRR20EP86478 221 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 PRR20CP86479 221 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 PRR20DP86480 221 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 PRR20BP86481 221 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 PRR20AP86496 221 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 CABLES1Q8TDN4 633 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 NUDT12Q9BQG2 462 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 POLR3EQ9NVU0 708 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 PLA2R1Q13018 1463 aa9.72□□□□□ -0.85
SEC22C-215ENST00000487701 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.86
SEC22C-215ENST00000487701 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.86
SEC22C-215ENST00000487701 TNFRSF10AO00220 468 aa9.71□□□□□ -0.86
SEC22C-215ENST00000487701 HRCP23327 699 aa9.71□□□□□ -0.86
SEC22C-215ENST00000487701 NUTM2DQ5VT03 806 aaPredicted RBP9.71□□□□□ -0.86
SEC22C-215ENST00000487701 NUTM2AQ8IVF1 878 aaPredicted RBP9.71□□□□□ -0.86
SEC22C-215ENST00000487701 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
SEC22C-215ENST00000487701 NUP155O75694 1391 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms