RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 CNGB1Q14028 1251 aaPredicted RBP13.21□□□□□ -0.29
SATB1-215ENST00000487699 RGPD1P0DJD0 1748 aa13.21□□□□□ -0.3
SATB1-215ENST00000487699 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
SATB1-215ENST00000487699 EZH2Q15910 746 aaKnown RBP13.2□□□□□ -0.3
SATB1-215ENST00000487699 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
SATB1-215ENST00000487699 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
SATB1-215ENST00000487699 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
SATB1-215ENST00000487699 APBA3O96018 575 aa13.19□□□□□ -0.3
SATB1-215ENST00000487699 TATP17735 454 aaPredicted RBP13.19□□□□□ -0.3
SATB1-215ENST00000487699 PPP2R1AP30153 589 aa13.19□□□□□ -0.3
SATB1-215ENST00000487699 PROM2Q8N271 834 aa13.19□□□□□ -0.3
SATB1-215ENST00000487699 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
SATB1-215ENST00000487699 KDRP35968 1356 aa13.19□□□□□ -0.3
SATB1-215ENST00000487699 PARD3Q8TEW0 1356 aa13.19□□□□□ -0.3
SATB1-215ENST00000487699 BAG6P46379 1132 aa13.18□□□□□ -0.3
SATB1-215ENST00000487699 ACSBG1Q96GR2 724 aa13.18□□□□□ -0.3
SATB1-215ENST00000487699 PKD1L3Q7Z443 1732 aa13.17□□□□□ -0.3
SATB1-215ENST00000487699 PLSCR1O15162 318 aa13.17□□□□□ -0.3
SATB1-215ENST00000487699 SF3B2Q13435 895 aaKnown RBP13.17□□□□□ -0.3
SATB1-215ENST00000487699 NKX1-1Q15270 411 aaPredicted RBP13.17□□□□□ -0.3
SATB1-215ENST00000487699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.3
SATB1-215ENST00000487699 NHSQ6T4R5 1651 aa13.15□□□□□ -0.3
SATB1-215ENST00000487699 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
SATB1-215ENST00000487699 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
SATB1-215ENST00000487699 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
SATB1-215ENST00000487699 PRIM1P49642 420 aaKnown RBP13.14□□□□□ -0.31
SATB1-215ENST00000487699 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
SATB1-215ENST00000487699 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
SATB1-215ENST00000487699 PHKG2P15735 406 aa13.13□□□□□ -0.31
SATB1-215ENST00000487699 RREB1Q92766 1687 aa13.12□□□□□ -0.31
SATB1-215ENST00000487699 HMOX1P09601 288 aa13.12□□□□□ -0.31
SATB1-215ENST00000487699 SPG7Q9UQ90 795 aa13.12□□□□□ -0.31
SATB1-215ENST00000487699 TOGARAM1Q9Y4F4 1720 aa13.12□□□□□ -0.31
SATB1-215ENST00000487699 RGPD3A6NKT7 1758 aaPredicted RBP13.1□□□□□ -0.31
SATB1-215ENST00000487699 RGPD4Q7Z3J3 1758 aa13.1□□□□□ -0.31
SATB1-215ENST00000487699 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
SATB1-215ENST00000487699 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
SATB1-215ENST00000487699 IFNL2Q8IZJ0 200 aa13.1□□□□□ -0.31
SATB1-215ENST00000487699 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
SATB1-215ENST00000487699 SRCAPQ6ZRS2 3230 aa13.1□□□□□ -0.31
SATB1-215ENST00000487699 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
SATB1-215ENST00000487699 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
SATB1-215ENST00000487699 BTAF1O14981 1849 aa13.09□□□□□ -0.31
SATB1-215ENST00000487699 KDM6AO15550 1401 aaPredicted RBP13.09□□□□□ -0.31
SATB1-215ENST00000487699 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
SATB1-215ENST00000487699 PLEKHO1Q53GL0 409 aaPredicted RBP13.09□□□□□ -0.31
SATB1-215ENST00000487699 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
SATB1-215ENST00000487699 RALBP1Q15311 655 aa13.08□□□□□ -0.32
SATB1-215ENST00000487699 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
SATB1-215ENST00000487699 PIGBQ92521 554 aa13.08□□□□□ -0.32
SATB1-215ENST00000487699 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
SATB1-215ENST00000487699 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
SATB1-215ENST00000487699 PHACTR3Q96KR7 559 aa13.07□□□□□ -0.32
SATB1-215ENST00000487699 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
SATB1-215ENST00000487699 U2SURPO15042 1029 aaKnown RBP13.06□□□□□ -0.32
SATB1-215ENST00000487699 SYTL4Q96C24 671 aaPredicted RBP13.06□□□□□ -0.32
SATB1-215ENST00000487699 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
SATB1-215ENST00000487699 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
SATB1-215ENST00000487699 KCNQ4P56696 695 aa13.05□□□□□ -0.32
SATB1-215ENST00000487699 R3HDM1Q15032 1099 aaKnown RBP13.05□□□□□ -0.32
SATB1-215ENST00000487699 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
SATB1-215ENST00000487699 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
SATB1-215ENST00000487699 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
SATB1-215ENST00000487699 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
SATB1-215ENST00000487699 ITGB4P16144 1822 aa13.04□□□□□ -0.32
SATB1-215ENST00000487699 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
SATB1-215ENST00000487699 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
SATB1-215ENST00000487699 PLEKHF1Q96S99 279 aa13.04□□□□□ -0.32
SATB1-215ENST00000487699 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
SATB1-215ENST00000487699 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
SATB1-215ENST00000487699 LY75O60449 1722 aa13.03□□□□□ -0.32
SATB1-215ENST00000487699 FCHSD2O94868 740 aa13.03□□□□□ -0.32
SATB1-215ENST00000487699 PRKAR2BP31323 418 aa13.03□□□□□ -0.32
SATB1-215ENST00000487699 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
SATB1-215ENST00000487699 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
SATB1-215ENST00000487699 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
SATB1-215ENST00000487699 MYBBP1AQ9BQG0 1328 aaKnown RBP13.03□□□□□ -0.32
SATB1-215ENST00000487699 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
SATB1-215ENST00000487699 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.33
SATB1-215ENST00000487699 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
SATB1-215ENST00000487699 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
SATB1-215ENST00000487699 ZNF827Q17R98 1081 aa13.02□□□□□ -0.33
SATB1-215ENST00000487699 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.33
SATB1-215ENST00000487699 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
SATB1-215ENST00000487699 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
SATB1-215ENST00000487699 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
SATB1-215ENST00000487699 NUDCQ9Y266 331 aa13.01□□□□□ -0.33
SATB1-215ENST00000487699 PALLDQ8WX93 1383 aa13.01□□□□□ -0.33
SATB1-215ENST00000487699 MRC1P22897 1456 aa13□□□□□ -0.33
SATB1-215ENST00000487699 CCDC184Q52MB2 194 aa13□□□□□ -0.33
SATB1-215ENST00000487699 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
SATB1-215ENST00000487699 NFATC2IPQ8NCF5 419 aa13□□□□□ -0.33
SATB1-215ENST00000487699 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
SATB1-215ENST00000487699 KAT6BQ8WYB5 2073 aa13□□□□□ -0.33
SATB1-215ENST00000487699 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
SATB1-215ENST00000487699 CCNL1Q9UK58 526 aaPredicted RBP12.99□□□□□ -0.33
SATB1-215ENST00000487699 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
SATB1-215ENST00000487699 ITPK1Q13572 414 aa12.98□□□□□ -0.33
SATB1-215ENST00000487699 AMIGO3Q86WK7 504 aa12.98□□□□□ -0.33
SATB1-215ENST00000487699 SMARCC1Q92922 1105 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms