RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MCM10Q7L590 875 aa32.71■■■□□ 2.83
HLA-C-208ENST00000487245 NLRP6P59044 892 aa32.71■■■□□ 2.83
HLA-C-208ENST00000487245 GAS2L2Q8NHY3 880 aa32.7■■■□□ 2.83
HLA-C-208ENST00000487245 RTF1Q92541 710 aaKnown RBP32.7■■■□□ 2.83
HLA-C-208ENST00000487245 MFAP1P55081 439 aaKnown RBP32.69■■■□□ 2.82
HLA-C-208ENST00000487245 ANKLE2Q86XL3 938 aa32.69■■■□□ 2.82
HLA-C-208ENST00000487245 HTATSF1O43719 755 aaKnown RBP32.69■■■□□ 2.82
HLA-C-208ENST00000487245 BMP2KLQ5H9B9 411 aa32.69■■■□□ 2.82
HLA-C-208ENST00000487245 INTS3Q68E01 1043 aaKnown RBP32.69■■■□□ 2.82
HLA-C-208ENST00000487245 SLKQ9H2G2 1235 aaPredicted RBP32.69■■■□□ 2.82
HLA-C-208ENST00000487245 RBM25P49756 843 aaKnown RBP32.67■■■□□ 2.82
HLA-C-208ENST00000487245 PTPRCP08575 1304 aa32.67■■■□□ 2.82
HLA-C-208ENST00000487245 EYA1Q99502 592 aa32.67■■■□□ 2.82
HLA-C-208ENST00000487245 MTHFSDQ2M296 383 aaKnown RBP32.66■■■□□ 2.82
HLA-C-208ENST00000487245 LNPKQ9C0E8 428 aa32.65■■■□□ 2.82
HLA-C-208ENST00000487245 CHD2O14647 1828 aaKnown RBP32.65■■■□□ 2.82
HLA-C-208ENST00000487245 ZNF142P52746 1687 aaPredicted RBP32.64■■■□□ 2.81
HLA-C-208ENST00000487245 ANKRD45Q5TZF3 282 aa32.62■■■□□ 2.81
HLA-C-208ENST00000487245 HOXC9P31274 260 aa32.61■■■□□ 2.81
HLA-C-208ENST00000487245 MARF1Q9Y4F3 1742 aaKnown RBP32.61■■■□□ 2.81
HLA-C-208ENST00000487245 C1orf115Q9H7X2 142 aa32.61■■■□□ 2.81
HLA-C-208ENST00000487245 SIRT2Q8IXJ6 389 aa32.6■■■□□ 2.81
HLA-C-208ENST00000487245 ABTB2Q8N961 1025 aa32.6■■■□□ 2.81
HLA-C-208ENST00000487245 NCOA3Q9Y6Q9 1424 aa32.6■■■□□ 2.81
HLA-C-208ENST00000487245 SNX21Q969T3 373 aa32.59■■■□□ 2.81
HLA-C-208ENST00000487245 PHF8Q9UPP1 1060 aa32.59■■■□□ 2.81
HLA-C-208ENST00000487245 RTL1A6NKG5 1358 aa32.59■■■□□ 2.81
HLA-C-208ENST00000487245 TSPYL4Q9UJ04 414 aa32.59■■■□□ 2.81
HLA-C-208ENST00000487245 IL27Q8NEV9 243 aa32.58■■■□□ 2.81
HLA-C-208ENST00000487245 RGS12O14924 1447 aa32.57■■■□□ 2.81
HLA-C-208ENST00000487245 KRT24Q2M2I5 525 aa32.57■■■□□ 2.8
HLA-C-208ENST00000487245 CHMP5Q9NZZ3 219 aa32.57■■■□□ 2.8
HLA-C-208ENST00000487245 FOXO3O43524 673 aa32.56■■■□□ 2.8
HLA-C-208ENST00000487245 HSCBQ8IWL3 235 aa32.54■■■□□ 2.8
HLA-C-208ENST00000487245 RPAP2Q8IXW5 612 aaPredicted RBP32.54■■■□□ 2.8
HLA-C-208ENST00000487245 SOS1Q07889 1333 aaPredicted RBP32.53■■■□□ 2.8
HLA-C-208ENST00000487245 BABAM1Q9NWV8 329 aa32.53■■■□□ 2.8
HLA-C-208ENST00000487245 GNAT3A8MTJ3 354 aa32.52■■■□□ 2.8
HLA-C-208ENST00000487245 DCTPP1Q9H773 170 aa32.52■■■□□ 2.8
HLA-C-208ENST00000487245 ANKRD44Q8N8A2 993 aa32.52■■■□□ 2.8
HLA-C-208ENST00000487245 LRRC37A3O60309 1634 aa32.51■■■□□ 2.8
HLA-C-208ENST00000487245 NWD1Q149M9 1564 aa32.51■■■□□ 2.8
HLA-C-208ENST00000487245 EIF5BO60841 1220 aaKnown RBP32.51■■■□□ 2.79
HLA-C-208ENST00000487245 SLC4A2P04920 1241 aa32.51■■■□□ 2.79
HLA-C-208ENST00000487245 SETD1BQ9UPS6 1966 aaKnown RBP32.5■■■□□ 2.79
HLA-C-208ENST00000487245 NUTM2GQ5VZR2 741 aa32.5■■■□□ 2.79
HLA-C-208ENST00000487245 ADGRL3Q9HAR2 1447 aa32.5■■■□□ 2.79
HLA-C-208ENST00000487245 ADAMTSL3P82987 1691 aa32.48■■■□□ 2.79
HLA-C-208ENST00000487245 MIS18AQ9NYP9 233 aa32.48■■■□□ 2.79
HLA-C-208ENST00000487245 BRPF3Q9ULD4 1205 aa32.48■■■□□ 2.79
HLA-C-208ENST00000487245 MCM4P33991 863 aa32.47■■■□□ 2.79
HLA-C-208ENST00000487245 DDIT3P35638 169 aa32.47■■■□□ 2.79
HLA-C-208ENST00000487245 MAP3K5Q99683 1374 aa32.47■■■□□ 2.79
HLA-C-208ENST00000487245 ATP10DQ9P241 1426 aa32.46■■■□□ 2.79
HLA-C-208ENST00000487245 CCT4P50991 539 aaKnown RBP32.46■■■□□ 2.79
HLA-C-208ENST00000487245 IP6K1Q92551 441 aa32.46■■■□□ 2.79
HLA-C-208ENST00000487245 C14orf37Q86TY3 774 aa32.45■■■□□ 2.79
HLA-C-208ENST00000487245 STK31Q9BXU1 1019 aa32.45■■■□□ 2.79
HLA-C-208ENST00000487245 KCNH5Q8NCM2 988 aa32.44■■■□□ 2.78
HLA-C-208ENST00000487245 CEP85Q6P2H3 762 aa32.43■■■□□ 2.78
HLA-C-208ENST00000487245 TBC1D9Q6ZT07 1266 aa32.43■■■□□ 2.78
HLA-C-208ENST00000487245 MSH6P52701 1360 aa32.43■■■□□ 2.78
HLA-C-208ENST00000487245 CCDC30Q5VVM6 783 aa32.42■■■□□ 2.78
HLA-C-208ENST00000487245 CIZ1Q9ULV3 898 aaPredicted RBP32.42■■■□□ 2.78
HLA-C-208ENST00000487245 PSME1Q06323 249 aa32.42■■■□□ 2.78
HLA-C-208ENST00000487245 KIF2CQ99661 725 aa32.42■■■□□ 2.78
HLA-C-208ENST00000487245 CDC45O75419 566 aa32.41■■■□□ 2.78
HLA-C-208ENST00000487245 LTN1O94822 1766 aa32.41■■■□□ 2.78
HLA-C-208ENST00000487245 TAF7Q15545 349 aaPredicted RBP32.4■■■□□ 2.78
HLA-C-208ENST00000487245 NFAT5O94916 1531 aa32.4■■■□□ 2.78
HLA-C-208ENST00000487245 NPHP4O75161 1426 aaPredicted RBP32.4■■■□□ 2.78
HLA-C-208ENST00000487245 L1TD1Q5T7N2 865 aaKnown RBP32.39■■■□□ 2.78
HLA-C-208ENST00000487245 LTV1Q96GA3 475 aaPredicted RBP32.39■■■□□ 2.78
HLA-C-208ENST00000487245 HMMRO75330 724 aa32.38■■■□□ 2.77
HLA-C-208ENST00000487245 ESCO1Q5FWF5 840 aa32.38■■■□□ 2.77
HLA-C-208ENST00000487245 PLEKHM2Q8IWE5 1019 aa32.38■■■□□ 2.77
HLA-C-208ENST00000487245 SPRYD3Q8NCJ5 442 aa32.38■■■□□ 2.77
HLA-C-208ENST00000487245 IL17REQ8NFR9 667 aa32.37■■■□□ 2.77
HLA-C-208ENST00000487245 CACNA1FO60840 1977 aa32.37■■■□□ 2.77
HLA-C-208ENST00000487245 MEIS3Q99687 375 aa32.37■■■□□ 2.77
HLA-C-208ENST00000487245 G2E3Q7L622 706 aa32.36■■■□□ 2.77
HLA-C-208ENST00000487245 PHRF1Q9P1Y6 1649 aaKnown RBP32.36■■■□□ 2.77
HLA-C-208ENST00000487245 TTC22Q5TAA0 569 aa32.33■■■□□ 2.77
HLA-C-208ENST00000487245 DDX11L8A8MPP1 907 aa32.33■■■□□ 2.77
HLA-C-208ENST00000487245 GSPT1P15170 499 aaKnown RBP32.33■■■□□ 2.77
HLA-C-208ENST00000487245 CHMP4AQ9BY43 222 aa32.32■■■□□ 2.76
HLA-C-208ENST00000487245 FAM208AQ9UK61 1670 aaKnown RBP32.32■■■□□ 2.76
HLA-C-208ENST00000487245 FLIIQ13045 1269 aa32.31■■■□□ 2.76
HLA-C-208ENST00000487245 SLC4A10Q6U841 1118 aa32.31■■■□□ 2.76
HLA-C-208ENST00000487245 HSP90AB1P08238 724 aaKnown RBP32.29■■■□□ 2.76
HLA-C-208ENST00000487245 GNAI2P04899 355 aa32.29■■■□□ 2.76
HLA-C-208ENST00000487245 GNAI3P08754 354 aa32.29■■■□□ 2.76
HLA-C-208ENST00000487245 CEMIPQ8WUJ3 1361 aa32.28■■■□□ 2.76
HLA-C-208ENST00000487245 RBM33Q96EV2 1170 aaKnown RBP32.28■■■□□ 2.76
HLA-C-208ENST00000487245 F6X3S4 739 aa32.27■■■□□ 2.76
HLA-C-208ENST00000487245 FSD2A1L4K1 749 aa32.27■■■□□ 2.76
HLA-C-208ENST00000487245 K7ELQ4 463 aaPredicted RBP32.26■■■□□ 2.75
HLA-C-208ENST00000487245 FKBP5Q13451 457 aaPredicted RBP32.26■■■□□ 2.75
HLA-C-208ENST00000487245 NBPF6Q5VWK0 638 aa32.26■■■□□ 2.75
HLA-C-208ENST00000487245 USHBP1Q8N6Y0 703 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms