RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 FXR2P51116 673 aaKnown RBP eCLIP7.45□□□□□ -1.222e-12■□□□□ 10.6
SF1-217ENST00000486960 GPIHBP1Q8IV16 184 aa7.45□□□□□ -1.22
SF1-217ENST00000486960 ORAI2Q96SN7 254 aa7.45□□□□□ -1.22
SF1-217ENST00000486960 PRDM10Q9NQV6 1147 aa7.45□□□□□ -1.22
SF1-217ENST00000486960 SZT2Q5T011 3432 aa7.45□□□□□ -1.22
SF1-217ENST00000486960 ABCC5O15440 1437 aa7.44□□□□□ -1.22
SF1-217ENST00000486960 EHBP1L1Q8N3D4 1523 aa7.44□□□□□ -1.22
SF1-217ENST00000486960 TPD52L2O43399 206 aaKnown RBP7.44□□□□□ -1.22
SF1-217ENST00000486960 GPATCH11Q8N954 259 aa7.44□□□□□ -1.22
SF1-217ENST00000486960 PPME1Q9Y570 386 aa7.44□□□□□ -1.22
SF1-217ENST00000486960 GCC2Q8IWJ2 1684 aa7.44□□□□□ -1.22
SF1-217ENST00000486960 MCCP23508 829 aa7.43□□□□□ -1.22
SF1-217ENST00000486960 AAMPQ13685 434 aa7.43□□□□□ -1.22
SF1-217ENST00000486960 GSE1Q14687 1217 aa7.43□□□□□ -1.22
SF1-217ENST00000486960 CHADLQ6NUI6 762 aa7.43□□□□□ -1.22
SF1-217ENST00000486960 NLGN2Q8NFZ4 835 aa7.43□□□□□ -1.22
SF1-217ENST00000486960 DNAJC2Q99543 621 aaKnown RBP7.43□□□□□ -1.22
SF1-217ENST00000486960 STK24Q9Y6E0 443 aa7.43□□□□□ -1.22
SF1-217ENST00000486960 IDI1Q13907 227 aa7.42□□□□□ -1.22
SF1-217ENST00000486960 UBXN4Q92575 508 aa7.42□□□□□ -1.22
SF1-217ENST00000486960 MRRFQ96E11 262 aaKnown RBP7.42□□□□□ -1.22
SF1-217ENST00000486960 ABHD8Q96I13 439 aa7.42□□□□□ -1.22
SF1-217ENST00000486960 PCMTD1Q96MG8 357 aaPredicted RBP7.42□□□□□ -1.22
SF1-217ENST00000486960 IVNS1ABPQ9Y6Y0 642 aa7.42□□□□□ -1.22
SF1-217ENST00000486960 USP19O94966 1318 aa7.42□□□□□ -1.22
SF1-217ENST00000486960 ZNF644Q9H582 1327 aaPredicted RBP7.42□□□□□ -1.22
SF1-217ENST00000486960 COL6A3P12111 3177 aa7.42□□□□□ -1.22
SF1-217ENST00000486960 NRXN3Q9Y4C0 1643 aa7.41□□□□□ -1.22
SF1-217ENST00000486960 ATP1B4Q9UN42 357 aaPredicted RBP7.41□□□□□ -1.22
SF1-217ENST00000486960 USTQ9Y2C2 406 aa7.41□□□□□ -1.22
SF1-217ENST00000486960 TBX22Q9Y458 520 aa7.41□□□□□ -1.22
SF1-217ENST00000486960 ADGRL2O95490 1459 aa7.41□□□□□ -1.22
SF1-217ENST00000486960 PLEKHH2Q8IVE3 1493 aa7.41□□□□□ -1.22
SF1-217ENST00000486960 TCF3P15923 654 aa7.4□□□□□ -1.22
SF1-217ENST00000486960 XPCQ01831 940 aaPredicted RBP7.4□□□□□ -1.22
SF1-217ENST00000486960 SPTY2D1Q68D10 685 aaPredicted RBP7.4□□□□□ -1.22
SF1-217ENST00000486960 CNPY4Q8N129 248 aa7.4□□□□□ -1.22
SF1-217ENST00000486960 POM121Q96HA1 1249 aa7.4□□□□□ -1.22
SF1-217ENST00000486960 RBM27Q9P2N5 1060 aaKnown RBP7.4□□□□□ -1.22
SF1-217ENST00000486960 LMTK2Q8IWU2 1503 aa7.4□□□□□ -1.22
SF1-217ENST00000486960 EIF2AK4Q9P2K8 1649 aaKnown RBP7.39□□□□□ -1.23
SF1-217ENST00000486960 ARHGAP31Q2M1Z3 1444 aa7.39□□□□□ -1.23
SF1-217ENST00000486960 KIAA1522Q9P206 1035 aaPredicted RBP7.39□□□□□ -1.23
SF1-217ENST00000486960 ZNF330Q9Y3S2 320 aaPredicted RBP7.39□□□□□ -1.23
SF1-217ENST00000486960 PEAK1Q9H792 1746 aa7.38□□□□□ -1.23
SF1-217ENST00000486960 TOMM70O94826 608 aa7.38□□□□□ -1.23
SF1-217ENST00000486960 MICAL1Q8TDZ2 1067 aa7.38□□□□□ -1.23
SF1-217ENST00000486960 SIRT1Q96EB6 747 aa7.38□□□□□ -1.23
SF1-217ENST00000486960 RPRD2Q5VT52 1461 aaKnown RBP7.37□□□□□ -1.23
SF1-217ENST00000486960 RIMS2Q9UQ26 1411 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 CLSPNQ9HAW4 1339 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 TUBGCP6Q96RT7 1819 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 FOXN1O15353 648 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 CSB-PGBD3P0DP91 1061 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 GRIPAP1Q4V328 841 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 FAM196AQ6ZSG2 479 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 MTFR1LQ9H019 292 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 SUGT1Q9Y2Z0 365 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 LAS1LQ9Y4W2 734 aaKnown RBP7.37□□□□□ -1.23
SF1-217ENST00000486960 TOPAZ1Q8N9V7 1692 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 ARHGEF5Q12774 1597 aa7.37□□□□□ -1.23
SF1-217ENST00000486960 PIK3R4Q99570 1358 aa7.36□□□□□ -1.23
SF1-217ENST00000486960 DLL1O00548 723 aa7.36□□□□□ -1.23
SF1-217ENST00000486960 NEFMP07197 916 aa7.36□□□□□ -1.23
SF1-217ENST00000486960 MCCD1P59942 119 aaPredicted RBP7.36□□□□□ -1.23
SF1-217ENST00000486960 FAM50AQ14320 339 aaKnown RBP7.36□□□□□ -1.23
SF1-217ENST00000486960 SF3A1Q15459 793 aaKnown RBP7.36□□□□□ -1.23
SF1-217ENST00000486960 RTL5Q5HYW3 569 aaPredicted RBP7.36□□□□□ -1.23
SF1-217ENST00000486960 MPNDQ8N594 471 aa7.36□□□□□ -1.23
SF1-217ENST00000486960 CREBZFQ9NS37 354 aa7.36□□□□□ -1.23
SF1-217ENST00000486960 TULP4Q9NRJ4 1543 aa7.36□□□□□ -1.23
SF1-217ENST00000486960 PAPPAQ13219 1627 aa7.35□□□□□ -1.23
SF1-217ENST00000486960 HAX1O00165 279 aa7.35□□□□□ -1.23
SF1-217ENST00000486960 RBM26Q5T8P6 1007 aaKnown RBP7.35□□□□□ -1.23
SF1-217ENST00000486960 PTF1AQ7RTS3 328 aa7.35□□□□□ -1.23
SF1-217ENST00000486960 CABLES1Q8TDN4 633 aa7.35□□□□□ -1.23
SF1-217ENST00000486960 MORC4Q8TE76 937 aa7.35□□□□□ -1.23
SF1-217ENST00000486960 FARP1Q9Y4F1 1045 aaPredicted RBP7.35□□□□□ -1.23
SF1-217ENST00000486960 DUOX2Q9NRD8 1548 aa7.35□□□□□ -1.23
SF1-217ENST00000486960 ZC3H6P61129 1189 aaKnown RBP7.34□□□□□ -1.23
SF1-217ENST00000486960 RALBP1Q15311 655 aa7.34□□□□□ -1.23
SF1-217ENST00000486960 CCDC181Q5TID7 509 aa7.34□□□□□ -1.23
SF1-217ENST00000486960 MTUS2Q5JR59 1369 aa7.33□□□□□ -1.24
SF1-217ENST00000486960 DHX57Q6P158 1386 aaKnown RBP7.33□□□□□ -1.24
SF1-217ENST00000486960 SPATA31A5Q5VU36 1347 aa7.33□□□□□ -1.24
SF1-217ENST00000486960 SPATA31A7Q8IWB4 1347 aa7.33□□□□□ -1.24
SF1-217ENST00000486960 PITPNM2Q9BZ72 1349 aa7.33□□□□□ -1.24
SF1-217ENST00000486960 PTMAP06454 111 aaKnown RBP7.33□□□□□ -1.24
SF1-217ENST00000486960 ERCC3P19447 782 aa7.33□□□□□ -1.24
SF1-217ENST00000486960 TMTC2Q8N394 836 aa7.33□□□□□ -1.24
SF1-217ENST00000486960 NMRK2Q9NPI5 230 aa7.33□□□□□ -1.24
SF1-217ENST00000486960 TERF2IPQ9NYB0 399 aa7.33□□□□□ -1.24
SF1-217ENST00000486960 EEA1Q15075 1411 aa7.33□□□□□ -1.24
SF1-217ENST00000486960 COL14A1Q05707 1796 aaKnown RBP7.33□□□□□ -1.24
SF1-217ENST00000486960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.32□□□□□ -1.24
SF1-217ENST00000486960 CCDC85CA6NKD9 419 aa7.32□□□□□ -1.24
SF1-217ENST00000486960 GRIN3BO60391 1043 aa7.32□□□□□ -1.24
SF1-217ENST00000486960 RAB11FIP3O75154 756 aa7.32□□□□□ -1.24
SF1-217ENST00000486960 CCER1Q8TC90 406 aaPredicted RBP7.32□□□□□ -1.24
SF1-217ENST00000486960 PBXIP1Q96AQ6 731 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms