RNA–Protein interactions for RNA: ENST00000486946.1

AGAP3-220, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-220ENST00000486946 TTC21BQ7Z4L5 1316 aa16.75■□□□□ 0.27
AGAP3-220ENST00000486946 DDX54Q8TDD1 881 aaKnown RBP16.75■□□□□ 0.27
AGAP3-220ENST00000486946 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
AGAP3-220ENST00000486946 HTRA3P83110 453 aa16.74■□□□□ 0.27
AGAP3-220ENST00000486946 NFAT5O94916 1531 aa16.74■□□□□ 0.27
AGAP3-220ENST00000486946 RBM46Q8TBY0 533 aaKnown RBP16.72■□□□□ 0.27
AGAP3-220ENST00000486946 ZNF692Q9BU19 519 aaPredicted RBP16.72■□□□□ 0.27
AGAP3-220ENST00000486946 LY75O60449 1722 aa16.72■□□□□ 0.27
AGAP3-220ENST00000486946 TTC21AQ8NDW8 1320 aa16.71■□□□□ 0.27
AGAP3-220ENST00000486946 FLAD1Q8NFF5 587 aa16.71■□□□□ 0.27
AGAP3-220ENST00000486946 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
AGAP3-220ENST00000486946 NMRK2Q9NPI5 230 aa16.71■□□□□ 0.27
AGAP3-220ENST00000486946 ANKRD36BQ8N2N9 1353 aa16.71■□□□□ 0.27
AGAP3-220ENST00000486946 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
AGAP3-220ENST00000486946 ANKRD24Q8TF21 1146 aa16.69■□□□□ 0.26
AGAP3-220ENST00000486946 NSD2O96028 1365 aa16.68■□□□□ 0.26
AGAP3-220ENST00000486946 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
AGAP3-220ENST00000486946 HMGB2P26583 209 aaKnown RBP16.67■□□□□ 0.26
AGAP3-220ENST00000486946 FSTL1Q12841 308 aa16.67■□□□□ 0.26
AGAP3-220ENST00000486946 CICQ96RK0 1608 aaPredicted RBP16.67■□□□□ 0.26
AGAP3-220ENST00000486946 USP47Q96K76 1375 aa16.66■□□□□ 0.26
AGAP3-220ENST00000486946 MON2Q7Z3U7 1717 aa16.66■□□□□ 0.26
AGAP3-220ENST00000486946 SIN3AQ96ST3 1273 aa16.65■□□□□ 0.26
AGAP3-220ENST00000486946 DOT1LQ8TEK3 1739 aa16.65■□□□□ 0.26
AGAP3-220ENST00000486946 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.26
AGAP3-220ENST00000486946 HSPA1AP0DMV8 641 aaKnown RBP16.62■□□□□ 0.25
AGAP3-220ENST00000486946 HSPA1BP0DMV9 641 aaKnown RBP16.62■□□□□ 0.25
AGAP3-220ENST00000486946 USP54Q70EL1 1684 aa16.62■□□□□ 0.25
AGAP3-220ENST00000486946 KTN1Q86UP2 1357 aaKnown RBP16.62■□□□□ 0.25
AGAP3-220ENST00000486946 USP31Q70CQ4 1352 aa16.61■□□□□ 0.25
AGAP3-220ENST00000486946 LTN1O94822 1766 aa16.61■□□□□ 0.25
AGAP3-220ENST00000486946 C5P01031 1676 aa16.6■□□□□ 0.25
AGAP3-220ENST00000486946 ARHGAP27Q6ZUM4 889 aa16.6■□□□□ 0.25
AGAP3-220ENST00000486946 ZCRB1Q8TBF4 217 aaKnown RBP16.6■□□□□ 0.25
AGAP3-220ENST00000486946 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
AGAP3-220ENST00000486946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
AGAP3-220ENST00000486946 AK7Q96M32 723 aa16.59■□□□□ 0.25
AGAP3-220ENST00000486946 PCDH10Q9P2E7 1040 aa16.59■□□□□ 0.25
AGAP3-220ENST00000486946 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
AGAP3-220ENST00000486946 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
AGAP3-220ENST00000486946 SBNO2Q9Y2G9 1366 aa16.57■□□□□ 0.24
AGAP3-220ENST00000486946 PHF14O94880 888 aa16.57■□□□□ 0.24
AGAP3-220ENST00000486946 LTV1Q96GA3 475 aaPredicted RBP16.57■□□□□ 0.24
AGAP3-220ENST00000486946 PLEKHG2Q9H7P9 1386 aa16.56■□□□□ 0.24
AGAP3-220ENST00000486946 KDM2BQ8NHM5 1336 aa16.56■□□□□ 0.24
AGAP3-220ENST00000486946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.56■□□□□ 0.24
AGAP3-220ENST00000486946 C9orf131Q5VYM1 1079 aa16.56■□□□□ 0.24
AGAP3-220ENST00000486946 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
AGAP3-220ENST00000486946 NME9Q86XW9 330 aa16.56■□□□□ 0.24
AGAP3-220ENST00000486946 SMC1BQ8NDV3 1235 aa16.56■□□□□ 0.24
AGAP3-220ENST00000486946 PCGF6Q9BYE7 350 aa16.56■□□□□ 0.24
AGAP3-220ENST00000486946 PXDNLA1KZ92 1463 aa16.55■□□□□ 0.24
AGAP3-220ENST00000486946 NSD3Q9BZ95 1437 aa16.55■□□□□ 0.24
AGAP3-220ENST00000486946 TAF1LQ8IZX4 1826 aa16.55■□□□□ 0.24
AGAP3-220ENST00000486946 TGFB2P61812 414 aa16.55■□□□□ 0.24
AGAP3-220ENST00000486946 IP6K1Q92551 441 aa16.55■□□□□ 0.24
AGAP3-220ENST00000486946 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
AGAP3-220ENST00000486946 SMIM5Q71RC9 77 aa16.54■□□□□ 0.24
AGAP3-220ENST00000486946 RRAGCQ9HB90 399 aa16.54■□□□□ 0.24
AGAP3-220ENST00000486946 C10orf71Q711Q0 1435 aa16.53■□□□□ 0.24
AGAP3-220ENST00000486946 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
AGAP3-220ENST00000486946 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
AGAP3-220ENST00000486946 SSFA2P28290 1259 aa16.53■□□□□ 0.24
AGAP3-220ENST00000486946 FAM208AQ9UK61 1670 aaKnown RBP16.53■□□□□ 0.24
AGAP3-220ENST00000486946 KCPQ6ZWJ8 1503 aa16.52■□□□□ 0.24
AGAP3-220ENST00000486946 FCHSD2O94868 740 aa16.52■□□□□ 0.24
AGAP3-220ENST00000486946 TOGARAM1Q9Y4F4 1720 aa16.51■□□□□ 0.23
AGAP3-220ENST00000486946 MMP10P09238 476 aa16.51■□□□□ 0.23
AGAP3-220ENST00000486946 MEGF6O75095 1541 aa16.5■□□□□ 0.23
AGAP3-220ENST00000486946 UBR3Q6ZT12 1888 aa16.5■□□□□ 0.23
AGAP3-220ENST00000486946 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
AGAP3-220ENST00000486946 N4BP2Q86UW6 1770 aaPredicted RBP16.5■□□□□ 0.23
AGAP3-220ENST00000486946 EDC4Q6P2E9 1401 aaKnown RBP16.49■□□□□ 0.23
AGAP3-220ENST00000486946 MPRIPQ6WCQ1 1025 aa16.49■□□□□ 0.23
AGAP3-220ENST00000486946 TMC1Q8TDI8 760 aa16.49■□□□□ 0.23
AGAP3-220ENST00000486946 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
AGAP3-220ENST00000486946 SLC12A5Q9H2X9 1139 aa16.49■□□□□ 0.23
AGAP3-220ENST00000486946 KIAA1551Q9HCM1 1747 aa16.48■□□□□ 0.23
AGAP3-220ENST00000486946 KIF13BQ9NQT8 1826 aa16.48■□□□□ 0.23
AGAP3-220ENST00000486946 DPEP1P16444 411 aa16.48■□□□□ 0.23
AGAP3-220ENST00000486946 A0A1W2PP64 1363 aa16.48■□□□□ 0.23
AGAP3-220ENST00000486946 PCNTO95613 3336 aa16.48■□□□□ 0.23
AGAP3-220ENST00000486946 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
AGAP3-220ENST00000486946 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
AGAP3-220ENST00000486946 RNF181Q9P0P0 153 aa16.47■□□□□ 0.23
AGAP3-220ENST00000486946 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
AGAP3-220ENST00000486946 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
AGAP3-220ENST00000486946 GNPATO15228 680 aa16.44■□□□□ 0.22
AGAP3-220ENST00000486946 HOXC9P31274 260 aa16.44■□□□□ 0.22
AGAP3-220ENST00000486946 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
AGAP3-220ENST00000486946 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
AGAP3-220ENST00000486946 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
AGAP3-220ENST00000486946 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
AGAP3-220ENST00000486946 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
AGAP3-220ENST00000486946 AMPHP49418 695 aa16.43■□□□□ 0.22
AGAP3-220ENST00000486946 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
AGAP3-220ENST00000486946 PCDH11XQ9BZA7 1347 aa16.43■□□□□ 0.22
AGAP3-220ENST00000486946 PCDH11YQ9BZA8 1340 aa16.43■□□□□ 0.22
AGAP3-220ENST00000486946 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
AGAP3-220ENST00000486946 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms