RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SOX12O15370 315 aa22.61■■□□□ 1.21
PDLIM7-207ENST00000486828 C1orf115Q9H7X2 142 aa22.61■■□□□ 1.21
PDLIM7-207ENST00000486828 MCM10Q7L590 875 aa22.6■■□□□ 1.21
PDLIM7-207ENST00000486828 CHD2O14647 1828 aaKnown RBP22.6■■□□□ 1.21
PDLIM7-207ENST00000486828 KCNA6P17658 529 aa22.59■■□□□ 1.21
PDLIM7-207ENST00000486828 CRB1P82279 1406 aa22.59■■□□□ 1.21
PDLIM7-207ENST00000486828 C22orf23Q9BZE7 217 aa22.59■■□□□ 1.21
PDLIM7-207ENST00000486828 MFAP1P55081 439 aaKnown RBP22.58■■□□□ 1.21
PDLIM7-207ENST00000486828 SIRT2Q8IXJ6 389 aa22.58■■□□□ 1.21
PDLIM7-207ENST00000486828 KDRP35968 1356 aa22.58■■□□□ 1.2
PDLIM7-207ENST00000486828 ANKRD45Q5TZF3 282 aa22.57■■□□□ 1.2
PDLIM7-207ENST00000486828 INTS3Q68E01 1043 aaKnown RBP22.56■■□□□ 1.2
PDLIM7-207ENST00000486828 TBC1D2Q9BYX2 928 aa22.56■■□□□ 1.2
PDLIM7-207ENST00000486828 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
PDLIM7-207ENST00000486828 RGS12O14924 1447 aa22.55■■□□□ 1.2
PDLIM7-207ENST00000486828 BMP2KLQ5H9B9 411 aa22.55■■□□□ 1.2
PDLIM7-207ENST00000486828 IGSF1Q8N6C5 1336 aa22.54■■□□□ 1.2
PDLIM7-207ENST00000486828 FRAT2O75474 233 aaPredicted RBP22.54■■□□□ 1.2
PDLIM7-207ENST00000486828 AMPHP49418 695 aa22.54■■□□□ 1.2
PDLIM7-207ENST00000486828 USP54Q70EL1 1684 aa22.54■■□□□ 1.2
PDLIM7-207ENST00000486828 MTHFSDQ2M296 383 aaKnown RBP22.53■■□□□ 1.2
PDLIM7-207ENST00000486828 NWD1Q149M9 1564 aa22.53■■□□□ 1.2
PDLIM7-207ENST00000486828 PTPRCP08575 1304 aa22.52■■□□□ 1.2
PDLIM7-207ENST00000486828 EYA1Q99502 592 aa22.52■■□□□ 1.2
PDLIM7-207ENST00000486828 ANTXR1Q9H6X2 564 aa22.52■■□□□ 1.2
PDLIM7-207ENST00000486828 MARF1Q9Y4F3 1742 aaKnown RBP22.51■■□□□ 1.19
PDLIM7-207ENST00000486828 NLRP6P59044 892 aa22.51■■□□□ 1.19
PDLIM7-207ENST00000486828 RTF1Q92541 710 aaKnown RBP22.51■■□□□ 1.19
PDLIM7-207ENST00000486828 ZNF335Q9H4Z2 1342 aaPredicted RBP22.51■■□□□ 1.19
PDLIM7-207ENST00000486828 FOXO3O43524 673 aa22.51■■□□□ 1.19
PDLIM7-207ENST00000486828 GSE1Q14687 1217 aa22.5■■□□□ 1.19
PDLIM7-207ENST00000486828 GAS2L2Q8NHY3 880 aa22.5■■□□□ 1.19
PDLIM7-207ENST00000486828 SLKQ9H2G2 1235 aaPredicted RBP22.5■■□□□ 1.19
PDLIM7-207ENST00000486828 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
PDLIM7-207ENST00000486828 RBM25P49756 843 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-207ENST00000486828 TSPYL4Q9UJ04 414 aa22.47■■□□□ 1.19
PDLIM7-207ENST00000486828 ATP10DQ9P241 1426 aa22.47■■□□□ 1.19
PDLIM7-207ENST00000486828 HTATSF1O43719 755 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-207ENST00000486828 DCTPP1Q9H773 170 aa22.47■■□□□ 1.19
PDLIM7-207ENST00000486828 LRRC37A3O60309 1634 aa22.47■■□□□ 1.19
PDLIM7-207ENST00000486828 HOXC9P31274 260 aa22.46■■□□□ 1.19
PDLIM7-207ENST00000486828 ANKRD44Q8N8A2 993 aa22.46■■□□□ 1.19
PDLIM7-207ENST00000486828 RBM33Q96EV2 1170 aaKnown RBP22.46■■□□□ 1.19
PDLIM7-207ENST00000486828 MSH6P52701 1360 aa22.45■■□□□ 1.19
PDLIM7-207ENST00000486828 MIS18AQ9NYP9 233 aa22.45■■□□□ 1.18
PDLIM7-207ENST00000486828 RPAP2Q8IXW5 612 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-207ENST00000486828 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
PDLIM7-207ENST00000486828 PROSER2Q86WR7 435 aaPredicted RBP22.44■■□□□ 1.18
PDLIM7-207ENST00000486828 RTL1A6NKG5 1358 aa22.43■■□□□ 1.18
PDLIM7-207ENST00000486828 ABTB2Q8N961 1025 aa22.43■■□□□ 1.18
PDLIM7-207ENST00000486828 NUTM2GQ5VZR2 741 aa22.42■■□□□ 1.18
PDLIM7-207ENST00000486828 CEP85Q6P2H3 762 aa22.42■■□□□ 1.18
PDLIM7-207ENST00000486828 GNAT3A8MTJ3 354 aa22.4■■□□□ 1.18
PDLIM7-207ENST00000486828 TBC1D9Q6ZT07 1266 aa22.4■■□□□ 1.18
PDLIM7-207ENST00000486828 HSCBQ8IWL3 235 aa22.4■■□□□ 1.18
PDLIM7-207ENST00000486828 PLEKHM2Q8IWE5 1019 aa22.39■■□□□ 1.18
PDLIM7-207ENST00000486828 MEIS3Q99687 375 aa22.39■■□□□ 1.18
PDLIM7-207ENST00000486828 PHF8Q9UPP1 1060 aa22.39■■□□□ 1.18
PDLIM7-207ENST00000486828 TMEM94Q12767 1356 aa22.39■■□□□ 1.17
PDLIM7-207ENST00000486828 SNX21Q969T3 373 aa22.38■■□□□ 1.17
PDLIM7-207ENST00000486828 ADGRL3Q9HAR2 1447 aa22.38■■□□□ 1.17
PDLIM7-207ENST00000486828 MAP3K5Q99683 1374 aa22.37■■□□□ 1.17
PDLIM7-207ENST00000486828 CDC45O75419 566 aa22.37■■□□□ 1.17
PDLIM7-207ENST00000486828 G2E3Q7L622 706 aa22.37■■□□□ 1.17
PDLIM7-207ENST00000486828 C14orf37Q86TY3 774 aa22.37■■□□□ 1.17
PDLIM7-207ENST00000486828 LTBP4Q8N2S1 1624 aa22.37■■□□□ 1.17
PDLIM7-207ENST00000486828 CCT4P50991 539 aaKnown RBP22.37■■□□□ 1.17
PDLIM7-207ENST00000486828 GSPT1P15170 499 aaKnown RBP22.36■■□□□ 1.17
PDLIM7-207ENST00000486828 FAM208AQ9UK61 1670 aaKnown RBP22.36■■□□□ 1.17
PDLIM7-207ENST00000486828 SPRYD3Q8NCJ5 442 aa22.35■■□□□ 1.17
PDLIM7-207ENST00000486828 STK31Q9BXU1 1019 aa22.35■■□□□ 1.17
PDLIM7-207ENST00000486828 BABAM1Q9NWV8 329 aa22.35■■□□□ 1.17
PDLIM7-207ENST00000486828 SOS1Q07889 1333 aaPredicted RBP22.35■■□□□ 1.17
PDLIM7-207ENST00000486828 LTN1O94822 1766 aa22.35■■□□□ 1.17
PDLIM7-207ENST00000486828 TTC22Q5TAA0 569 aa22.35■■□□□ 1.17
PDLIM7-207ENST00000486828 CHMP5Q9NZZ3 219 aa22.35■■□□□ 1.17
PDLIM7-207ENST00000486828 NCOA3Q9Y6Q9 1424 aa22.34■■□□□ 1.17
PDLIM7-207ENST00000486828 EIF5BO60841 1220 aaKnown RBP22.34■■□□□ 1.17
PDLIM7-207ENST00000486828 CCDC30Q5VVM6 783 aa22.33■■□□□ 1.17
PDLIM7-207ENST00000486828 IL17REQ8NFR9 667 aa22.33■■□□□ 1.17
PDLIM7-207ENST00000486828 LTV1Q96GA3 475 aaPredicted RBP22.33■■□□□ 1.17
PDLIM7-207ENST00000486828 NFAT5O94916 1531 aa22.33■■□□□ 1.17
PDLIM7-207ENST00000486828 F6X3S4 739 aa22.33■■□□□ 1.16
PDLIM7-207ENST00000486828 SLC4A10Q6U841 1118 aa22.33■■□□□ 1.16
PDLIM7-207ENST00000486828 KIF2CQ99661 725 aa22.33■■□□□ 1.16
PDLIM7-207ENST00000486828 HMMRO75330 724 aa22.32■■□□□ 1.16
PDLIM7-207ENST00000486828 C16orf71Q8IYS4 520 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-207ENST00000486828 IP6K1Q92551 441 aa22.31■■□□□ 1.16
PDLIM7-207ENST00000486828 C19orf44Q9H6X5 657 aa22.31■■□□□ 1.16
PDLIM7-207ENST00000486828 TAF7Q15545 349 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-207ENST00000486828 FLIIQ13045 1269 aa22.3■■□□□ 1.16
PDLIM7-207ENST00000486828 XIRP1Q702N8 1843 aaKnown RBP22.29■■□□□ 1.16
PDLIM7-207ENST00000486828 CACNA1FO60840 1977 aa22.28■■□□□ 1.16
PDLIM7-207ENST00000486828 USHBP1Q8N6Y0 703 aa22.28■■□□□ 1.16
PDLIM7-207ENST00000486828 OTUD7AQ8TE49 926 aaPredicted RBP22.28■■□□□ 1.16
PDLIM7-207ENST00000486828 SMARCA5O60264 1052 aaPredicted RBP22.27■■□□□ 1.16
PDLIM7-207ENST00000486828 GNAI2P04899 355 aa22.27■■□□□ 1.16
PDLIM7-207ENST00000486828 DDIT3P35638 169 aa22.27■■□□□ 1.16
PDLIM7-207ENST00000486828 CERKQ8TCT0 537 aa22.27■■□□□ 1.16
PDLIM7-207ENST00000486828 PHRF1Q9P1Y6 1649 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms