RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
CCDC171-208ENST00000486641 TMEM51Q9NW97 253 aa12.91□□□□□ -0.34
CCDC171-208ENST00000486641 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
CCDC171-208ENST00000486641 CUL4AQ13619 759 aa12.9□□□□□ -0.34
CCDC171-208ENST00000486641 ABCC1P33527 1531 aa12.9□□□□□ -0.34
CCDC171-208ENST00000486641 APBB1O00213 710 aa12.9□□□□□ -0.34
CCDC171-208ENST00000486641 KIF3BO15066 747 aa12.9□□□□□ -0.34
CCDC171-208ENST00000486641 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
CCDC171-208ENST00000486641 KIAA1524Q8TCG1 905 aa12.9□□□□□ -0.34
CCDC171-208ENST00000486641 DIAPH3Q9NSV4 1193 aa12.9□□□□□ -0.34
CCDC171-208ENST00000486641 EVC2Q86UK5 1308 aa12.9□□□□□ -0.34
CCDC171-208ENST00000486641 CTIFO43310 598 aaKnown RBP12.89□□□□□ -0.35
CCDC171-208ENST00000486641 KDM4AO75164 1064 aa12.89□□□□□ -0.35
CCDC171-208ENST00000486641 PDE4CQ08493 712 aa12.89□□□□□ -0.35
CCDC171-208ENST00000486641 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
CCDC171-208ENST00000486641 PYCARDQ9ULZ3 195 aa12.89□□□□□ -0.35
CCDC171-208ENST00000486641 VWDEQ8N2E2 1590 aa12.89□□□□□ -0.35
CCDC171-208ENST00000486641 KCNF1Q9H3M0 494 aa12.89□□□□□ -0.35
CCDC171-208ENST00000486641 MCM2P49736 904 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
CCDC171-208ENST00000486641 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 AP5Z1O43299 807 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 FCHSD2O94868 740 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 PRKAR2BP31323 418 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 CHAF1AQ13111 956 aaPredicted RBP12.88□□□□□ -0.35
CCDC171-208ENST00000486641 TPRNQ4KMQ1 711 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 CCDC183Q5T5S1 534 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 ZNF771Q7L3S4 317 aaPredicted RBP12.88□□□□□ -0.35
CCDC171-208ENST00000486641 ANKRD44Q8N8A2 993 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 INTS4Q96HW7 963 aaKnown RBP12.88□□□□□ -0.35
CCDC171-208ENST00000486641 FEZ1Q99689 392 aa12.88□□□□□ -0.35
CCDC171-208ENST00000486641 API5Q9BZZ5 524 aaKnown RBP12.88□□□□□ -0.35
CCDC171-208ENST00000486641 TCHHQ07283 1943 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 FYB1O15117 783 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 MX1P20591 662 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
CCDC171-208ENST00000486641 TAF3Q5VWG9 929 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 MBIPQ9NS73 344 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 OGFRQ9NZT2 677 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 A0A1W2PP64 1363 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 TULP4Q9NRJ4 1543 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 ZFYVE16Q7Z3T8 1539 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 C8orf58Q8NAV2 365 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 PHACTR3Q96KR7 559 aa12.87□□□□□ -0.35
CCDC171-208ENST00000486641 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
CCDC171-208ENST00000486641 PALD1Q9ULE6 856 aa12.86□□□□□ -0.35
CCDC171-208ENST00000486641 GNAI1P63096 354 aa12.85□□□□□ -0.35
CCDC171-208ENST00000486641 ZBTB22O15209 634 aa12.85□□□□□ -0.35
CCDC171-208ENST00000486641 CEP85Q6P2H3 762 aa12.85□□□□□ -0.35
CCDC171-208ENST00000486641 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
CCDC171-208ENST00000486641 LRRC7Q96NW7 1537 aa12.85□□□□□ -0.35
CCDC171-208ENST00000486641 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
CCDC171-208ENST00000486641 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
CCDC171-208ENST00000486641 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 PNPLA6Q8IY17 1366 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 ZNF853P0CG23 659 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 NCBP1Q09161 790 aaKnown RBP12.84□□□□□ -0.35
CCDC171-208ENST00000486641 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC171-208ENST00000486641 SPC24Q8NBT2 197 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 CNPY2Q9Y2B0 182 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 WDR33Q9C0J8 1336 aaKnown RBP12.84□□□□□ -0.35
CCDC171-208ENST00000486641 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 SRCIN1Q9C0H9 1055 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 CTNNA3Q9UI47 895 aa12.84□□□□□ -0.35
CCDC171-208ENST00000486641 FUCA2Q9BTY2 467 aa12.83□□□□□ -0.36
CCDC171-208ENST00000486641 FAM135BQ49AJ0 1406 aa12.83□□□□□ -0.36
CCDC171-208ENST00000486641 RTL1A6NKG5 1358 aa12.83□□□□□ -0.36
CCDC171-208ENST00000486641 HMOX1P09601 288 aa12.83□□□□□ -0.36
CCDC171-208ENST00000486641 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
CCDC171-208ENST00000486641 TPM3P06753 285 aa12.82□□□□□ -0.36
CCDC171-208ENST00000486641 SLFN14P0C7P3 912 aa12.82□□□□□ -0.36
CCDC171-208ENST00000486641 FBLN1P23142 703 aa12.82□□□□□ -0.36
CCDC171-208ENST00000486641 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
CCDC171-208ENST00000486641 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
CCDC171-208ENST00000486641 ADGRB3O60242 1522 aa12.82□□□□□ -0.36
CCDC171-208ENST00000486641 PDE1AP54750 535 aa12.82□□□□□ -0.36
CCDC171-208ENST00000486641 GABPB1Q06547 395 aaPredicted RBP12.82□□□□□ -0.36
CCDC171-208ENST00000486641 UPF3BQ9BZI7 483 aaKnown RBP12.82□□□□□ -0.36
CCDC171-208ENST00000486641 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
CCDC171-208ENST00000486641 PPLO60437 1756 aa12.81□□□□□ -0.36
CCDC171-208ENST00000486641 UBE2HP62256 183 aa12.81□□□□□ -0.36
CCDC171-208ENST00000486641 KRT24Q2M2I5 525 aa12.81□□□□□ -0.36
CCDC171-208ENST00000486641 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
CCDC171-208ENST00000486641 ARHGEF40Q8TER5 1519 aa12.81□□□□□ -0.36
CCDC171-208ENST00000486641 MROH1Q8NDA8 1641 aa12.81□□□□□ -0.36
CCDC171-208ENST00000486641 MCCP23508 829 aa12.8□□□□□ -0.36
CCDC171-208ENST00000486641 SRPK2P78362 688 aaKnown RBP12.8□□□□□ -0.36
CCDC171-208ENST00000486641 NAA30Q147X3 362 aaPredicted RBP12.8□□□□□ -0.36
CCDC171-208ENST00000486641 DDX41Q9UJV9 622 aaKnown RBP12.8□□□□□ -0.36
CCDC171-208ENST00000486641 VGLL3A8MV65 326 aa12.8□□□□□ -0.36
CCDC171-208ENST00000486641 ANAPC15P60006 121 aa12.8□□□□□ -0.36
CCDC171-208ENST00000486641 SYCP1Q15431 976 aa12.8□□□□□ -0.36
CCDC171-208ENST00000486641 NUTM2DQ5VT03 806 aaPredicted RBP12.8□□□□□ -0.36
CCDC171-208ENST00000486641 TSHZ3Q63HK5 1081 aa12.8□□□□□ -0.36
CCDC171-208ENST00000486641 EFCAB6Q5THR3 1501 aa12.8□□□□□ -0.36
CCDC171-208ENST00000486641 ANKRD26Q9UPS8 1709 aa12.8□□□□□ -0.36
CCDC171-208ENST00000486641 GLI2P10070 1586 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms