RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
SSR4-210ENST00000485612 MON2Q7Z3U7 1717 aa17.49■□□□□ 0.39
SSR4-210ENST00000485612 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
SSR4-210ENST00000485612 PRELPP51888 382 aa17.48■□□□□ 0.39
SSR4-210ENST00000485612 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
SSR4-210ENST00000485612 TNS4Q8IZW8 715 aa17.47■□□□□ 0.39
SSR4-210ENST00000485612 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
SSR4-210ENST00000485612 NSD2O96028 1365 aa17.47■□□□□ 0.39
SSR4-210ENST00000485612 KTN1Q86UP2 1357 aaKnown RBP17.47■□□□□ 0.39
SSR4-210ENST00000485612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSR4-210ENST00000485612 FLAD1Q8NFF5 587 aa17.46■□□□□ 0.39
SSR4-210ENST00000485612 LY75O60449 1722 aa17.46■□□□□ 0.39
SSR4-210ENST00000485612 KLRG1Q96E93 195 aa17.45■□□□□ 0.38
SSR4-210ENST00000485612 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
SSR4-210ENST00000485612 USP47Q96K76 1375 aa17.44■□□□□ 0.38
SSR4-210ENST00000485612 LTN1O94822 1766 aa17.44■□□□□ 0.38
SSR4-210ENST00000485612 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
SSR4-210ENST00000485612 JMYQ8N9B5 988 aa17.43■□□□□ 0.38
SSR4-210ENST00000485612 NME9Q86XW9 330 aa17.42■□□□□ 0.38
SSR4-210ENST00000485612 ZCRB1Q8TBF4 217 aaKnown RBP17.42■□□□□ 0.38
SSR4-210ENST00000485612 LTV1Q96GA3 475 aaPredicted RBP17.42■□□□□ 0.38
SSR4-210ENST00000485612 HTRA3P83110 453 aa17.41■□□□□ 0.38
SSR4-210ENST00000485612 USP54Q70EL1 1684 aa17.41■□□□□ 0.38
SSR4-210ENST00000485612 NEUROD1Q13562 356 aa17.4■□□□□ 0.38
SSR4-210ENST00000485612 NMRK2Q9NPI5 230 aa17.4■□□□□ 0.38
SSR4-210ENST00000485612 ROCK2O75116 1388 aaKnown RBP17.4■□□□□ 0.38
SSR4-210ENST00000485612 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.37
SSR4-210ENST00000485612 RBM46Q8TBY0 533 aaKnown RBP17.39■□□□□ 0.37
SSR4-210ENST00000485612 IP6K1Q92551 441 aa17.39■□□□□ 0.37
SSR4-210ENST00000485612 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
SSR4-210ENST00000485612 WDR90Q96KV7 1748 aa17.37■□□□□ 0.37
SSR4-210ENST00000485612 AK7Q96M32 723 aa17.36■□□□□ 0.37
SSR4-210ENST00000485612 PHF14O94880 888 aa17.35■□□□□ 0.37
SSR4-210ENST00000485612 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
SSR4-210ENST00000485612 C5P01031 1676 aa17.34■□□□□ 0.37
SSR4-210ENST00000485612 FSTL1Q12841 308 aa17.34■□□□□ 0.37
SSR4-210ENST00000485612 ARHGAP27Q6ZUM4 889 aa17.34■□□□□ 0.37
SSR4-210ENST00000485612 SBNO2Q9Y2G9 1366 aa17.34■□□□□ 0.37
SSR4-210ENST00000485612 CICQ96RK0 1608 aaPredicted RBP17.33■□□□□ 0.37
SSR4-210ENST00000485612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
SSR4-210ENST00000485612 SMIM5Q71RC9 77 aa17.33■□□□□ 0.36
SSR4-210ENST00000485612 BCS1LQ9Y276 419 aa17.33■□□□□ 0.36
SSR4-210ENST00000485612 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
SSR4-210ENST00000485612 PALLDQ8WX93 1383 aa17.32■□□□□ 0.36
SSR4-210ENST00000485612 RGPD2P0DJD1 1756 aa17.31■□□□□ 0.36
SSR4-210ENST00000485612 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
SSR4-210ENST00000485612 HDGFL2Q7Z4V5 671 aaPredicted RBP17.31■□□□□ 0.36
SSR4-210ENST00000485612 MEGF6O75095 1541 aa17.31■□□□□ 0.36
SSR4-210ENST00000485612 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
SSR4-210ENST00000485612 FAM208AQ9UK61 1670 aaKnown RBP17.29■□□□□ 0.36
SSR4-210ENST00000485612 SSFA2P28290 1259 aa17.29■□□□□ 0.36
SSR4-210ENST00000485612 HOXC9P31274 260 aa17.29■□□□□ 0.36
SSR4-210ENST00000485612 TGFB2P61812 414 aa17.29■□□□□ 0.36
SSR4-210ENST00000485612 PCNTO95613 3336 aa17.29■□□□□ 0.36
SSR4-210ENST00000485612 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
SSR4-210ENST00000485612 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
SSR4-210ENST00000485612 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
SSR4-210ENST00000485612 AMPHP49418 695 aa17.28■□□□□ 0.36
SSR4-210ENST00000485612 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
SSR4-210ENST00000485612 C4BP0C0L5 1744 aa17.27■□□□□ 0.36
SSR4-210ENST00000485612 PXDNLA1KZ92 1463 aa17.27■□□□□ 0.36
SSR4-210ENST00000485612 C9orf131Q5VYM1 1079 aa17.27■□□□□ 0.36
SSR4-210ENST00000485612 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
SSR4-210ENST00000485612 TAF1LQ8IZX4 1826 aa17.26■□□□□ 0.35
SSR4-210ENST00000485612 SLC34A2O95436 690 aa17.26■□□□□ 0.35
SSR4-210ENST00000485612 MMP10P09238 476 aa17.26■□□□□ 0.35
SSR4-210ENST00000485612 HSPA1AP0DMV8 641 aaKnown RBP17.26■□□□□ 0.35
SSR4-210ENST00000485612 HSPA1BP0DMV9 641 aaKnown RBP17.26■□□□□ 0.35
SSR4-210ENST00000485612 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
SSR4-210ENST00000485612 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
SSR4-210ENST00000485612 SLC12A5Q9H2X9 1139 aa17.26■□□□□ 0.35
SSR4-210ENST00000485612 RRAGCQ9HB90 399 aa17.26■□□□□ 0.35
SSR4-210ENST00000485612 EDC4Q6P2E9 1401 aaKnown RBP17.26■□□□□ 0.35
SSR4-210ENST00000485612 MAP3K19Q56UN5 1328 aa17.25■□□□□ 0.35
SSR4-210ENST00000485612 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
SSR4-210ENST00000485612 FCHSD2O94868 740 aa17.25■□□□□ 0.35
SSR4-210ENST00000485612 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
SSR4-210ENST00000485612 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
SSR4-210ENST00000485612 FBLN1P23142 703 aa17.24■□□□□ 0.35
SSR4-210ENST00000485612 USHBP1Q8N6Y0 703 aa17.24■□□□□ 0.35
SSR4-210ENST00000485612 LINC00116Q8NCU8 138 aa17.24■□□□□ 0.35
SSR4-210ENST00000485612 CARD11Q9BXL7 1154 aa17.24■□□□□ 0.35
SSR4-210ENST00000485612 TERF2IPQ9NYB0 399 aa17.24■□□□□ 0.35
SSR4-210ENST00000485612 PCDH11XQ9BZA7 1347 aa17.23■□□□□ 0.35
SSR4-210ENST00000485612 PCDH11YQ9BZA8 1340 aa17.23■□□□□ 0.35
SSR4-210ENST00000485612 DPEP1P16444 411 aa17.23■□□□□ 0.35
SSR4-210ENST00000485612 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
SSR4-210ENST00000485612 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
SSR4-210ENST00000485612 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
SSR4-210ENST00000485612 COG3Q96JB2 828 aa17.22■□□□□ 0.35
SSR4-210ENST00000485612 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.35
SSR4-210ENST00000485612 A0A1W2PP64 1363 aa17.21■□□□□ 0.35
SSR4-210ENST00000485612 GNPATO15228 680 aa17.21■□□□□ 0.35
SSR4-210ENST00000485612 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
SSR4-210ENST00000485612 SIK1P57059 783 aa17.2■□□□□ 0.34
SSR4-210ENST00000485612 PIGBQ92521 554 aa17.2■□□□□ 0.34
SSR4-210ENST00000485612 N4BP2Q86UW6 1770 aaPredicted RBP17.2■□□□□ 0.34
SSR4-210ENST00000485612 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
SSR4-210ENST00000485612 NLGN1Q8N2Q7 840 aa17.19■□□□□ 0.34
SSR4-210ENST00000485612 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms