RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 C20orf194Q5TEA3 1177 aa10.15□□□□□ -0.78
SRRM1-214ENST00000485541 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
SRRM1-214ENST00000485541 ARHGAP45Q92619 1136 aa10.15□□□□□ -0.78
SRRM1-214ENST00000485541 PLSCR2Q9NRY7 297 aa10.15□□□□□ -0.78
SRRM1-214ENST00000485541 RBM19Q9Y4C8 960 aaKnown RBP10.15□□□□□ -0.78
SRRM1-214ENST00000485541 RGPD2P0DJD1 1756 aa10.15□□□□□ -0.78
SRRM1-214ENST00000485541 RGPD5Q99666 1765 aa10.14□□□□□ -0.79
SRRM1-214ENST00000485541 SOS1Q07889 1333 aaPredicted RBP10.14□□□□□ -0.79
SRRM1-214ENST00000485541 FBLN1P23142 703 aa10.14□□□□□ -0.79
SRRM1-214ENST00000485541 EXOSC9Q06265 439 aaKnown RBP10.14□□□□□ -0.79
SRRM1-214ENST00000485541 SULT6B1Q6IMI4 303 aa10.14□□□□□ -0.79
SRRM1-214ENST00000485541 PROSER2Q86WR7 435 aaPredicted RBP10.14□□□□□ -0.79
SRRM1-214ENST00000485541 SPDYE1Q8NFV5 336 aaPredicted RBP10.14□□□□□ -0.79
SRRM1-214ENST00000485541 GAS2L2Q8NHY3 880 aa10.14□□□□□ -0.79
SRRM1-214ENST00000485541 CLUAP1Q96AJ1 413 aa10.14□□□□□ -0.79
SRRM1-214ENST00000485541 PHACTR3Q96KR7 559 aa10.14□□□□□ -0.79
SRRM1-214ENST00000485541 SSUH2Q9Y2M2 353 aa10.14□□□□□ -0.79
SRRM1-214ENST00000485541 USP19O94966 1318 aa10.13□□□□□ -0.79
SRRM1-214ENST00000485541 HOXC9P31274 260 aa10.13□□□□□ -0.79
SRRM1-214ENST00000485541 PSME1Q06323 249 aa10.13□□□□□ -0.79
SRRM1-214ENST00000485541 HSP90AB2PQ58FF8 381 aa10.13□□□□□ -0.79
SRRM1-214ENST00000485541 SMC4Q9NTJ3 1288 aa10.13□□□□□ -0.79
SRRM1-214ENST00000485541 BABAM1Q9NWV8 329 aa10.13□□□□□ -0.79
SRRM1-214ENST00000485541 DDX19BQ9UMR2 479 aa10.13□□□□□ -0.79
SRRM1-214ENST00000485541 CLEC11AQ9Y240 323 aa10.13□□□□□ -0.79
SRRM1-214ENST00000485541 KDM3BQ7LBC6 1761 aa10.13□□□□□ -0.79
SRRM1-214ENST00000485541 MVPQ14764 893 aaKnown RBP10.12□□□□□ -0.79
SRRM1-214ENST00000485541 ESCO1Q5FWF5 840 aa10.12□□□□□ -0.79
SRRM1-214ENST00000485541 ATF7IPQ6VMQ6 1270 aa10.12□□□□□ -0.79
SRRM1-214ENST00000485541 C14orf37Q86TY3 774 aa10.12□□□□□ -0.79
SRRM1-214ENST00000485541 DZIP1LQ8IYY4 767 aaKnown RBP10.12□□□□□ -0.79
SRRM1-214ENST00000485541 IP6K1Q92551 441 aa10.12□□□□□ -0.79
SRRM1-214ENST00000485541 OVOS2A0A0G2JMS6 1433 aa10.12□□□□□ -0.79
SRRM1-214ENST00000485541 ADAMTS7Q9UKP4 1686 aa10.12□□□□□ -0.79
SRRM1-214ENST00000485541 COL18A1P39060 1754 aa10.11□□□□□ -0.79
SRRM1-214ENST00000485541 CADPS2Q86UW7 1296 aa10.11□□□□□ -0.79
SRRM1-214ENST00000485541 FTSJ3Q8IY81 847 aaKnown RBP10.11□□□□□ -0.79
SRRM1-214ENST00000485541 SSH1Q8WYL5 1049 aa10.11□□□□□ -0.79
SRRM1-214ENST00000485541 TSR2Q969E8 191 aaKnown RBP10.11□□□□□ -0.79
SRRM1-214ENST00000485541 MSH6P52701 1360 aa10.11□□□□□ -0.79
SRRM1-214ENST00000485541 SIPA1L3O60292 1781 aaPredicted RBP10.11□□□□□ -0.79
SRRM1-214ENST00000485541 CRB1P82279 1406 aa10.1□□□□□ -0.79
SRRM1-214ENST00000485541 ATF3P18847 181 aa10.1□□□□□ -0.79
SRRM1-214ENST00000485541 FRAT1Q92837 279 aaPredicted RBP10.1□□□□□ -0.79
SRRM1-214ENST00000485541 TMEM94Q12767 1356 aa10.1□□□□□ -0.79
SRRM1-214ENST00000485541 CHL1O00533 1208 aa10.09□□□□□ -0.79
SRRM1-214ENST00000485541 VAMP4O75379 141 aa10.09□□□□□ -0.79
SRRM1-214ENST00000485541 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
SRRM1-214ENST00000485541 EYA1Q99502 592 aa10.09□□□□□ -0.79
SRRM1-214ENST00000485541 CHMP4AQ9BY43 222 aa10.09□□□□□ -0.79
SRRM1-214ENST00000485541 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
SRRM1-214ENST00000485541 SCN11AQ9UI33 1791 aa10.09□□□□□ -0.79
SRRM1-214ENST00000485541 NPHP3Q7Z494 1330 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 TNS3Q68CZ2 1445 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 NHSL1Q5SYE7 1610 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 ABCA3Q99758 1704 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 TRIM27P14373 513 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 TWISTNBQ3B726 338 aaPredicted RBP10.08□□□□□ -0.8
SRRM1-214ENST00000485541 AEBP1Q8IUX7 1158 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 PANK1Q8TE04 598 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 RTF1Q92541 710 aaKnown RBP10.08□□□□□ -0.8
SRRM1-214ENST00000485541 COG6Q9Y2V7 657 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
SRRM1-214ENST00000485541 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
SRRM1-214ENST00000485541 PXDNQ92626 1479 aa10.07□□□□□ -0.8
SRRM1-214ENST00000485541 ARHGEF25Q86VW2 580 aa10.07□□□□□ -0.8
SRRM1-214ENST00000485541 API5Q9BZZ5 524 aaKnown RBP10.07□□□□□ -0.8
SRRM1-214ENST00000485541 RWDD1Q9H446 243 aaPredicted RBP10.07□□□□□ -0.8
SRRM1-214ENST00000485541 PARP4Q9UKK3 1724 aaKnown RBP10.07□□□□□ -0.8
SRRM1-214ENST00000485541 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
SRRM1-214ENST00000485541 RLBP1P12271 317 aa10.06□□□□□ -0.8
SRRM1-214ENST00000485541 HDAC1Q13547 482 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-214ENST00000485541 KRT28Q7Z3Y7 464 aa10.06□□□□□ -0.8
SRRM1-214ENST00000485541 MRPL50Q8N5N7 158 aaKnown RBP10.06□□□□□ -0.8
SRRM1-214ENST00000485541 ABCC4O15439 1325 aa10.06□□□□□ -0.8
SRRM1-214ENST00000485541 PTPRCP08575 1304 aa10.06□□□□□ -0.8
SRRM1-214ENST00000485541 CEMIPQ8WUJ3 1361 aa10.05□□□□□ -0.8
SRRM1-214ENST00000485541 GCP02774 474 aa10.05□□□□□ -0.8
SRRM1-214ENST00000485541 MTHFSDQ2M296 383 aaKnown RBP10.05□□□□□ -0.8
SRRM1-214ENST00000485541 AMOTQ4VCS5 1084 aa10.05□□□□□ -0.8
SRRM1-214ENST00000485541 ORAI2Q96SN7 254 aa10.05□□□□□ -0.8
SRRM1-214ENST00000485541 BCL2L13Q9BXK5 485 aa10.05□□□□□ -0.8
SRRM1-214ENST00000485541 NOB1Q9ULX3 412 aaKnown RBP10.05□□□□□ -0.8
SRRM1-214ENST00000485541 PXDNLA1KZ92 1463 aa10.04□□□□□ -0.8
SRRM1-214ENST00000485541 CPDO75976 1380 aa10.04□□□□□ -0.8
SRRM1-214ENST00000485541 SOX12O15370 315 aa10.04□□□□□ -0.8
SRRM1-214ENST00000485541 FOXO3O43524 673 aa10.04□□□□□ -0.8
SRRM1-214ENST00000485541 BACH2Q9BYV9 841 aa10.04□□□□□ -0.8
SRRM1-214ENST00000485541 LAS1LQ9Y4W2 734 aaKnown RBP10.04□□□□□ -0.8
SRRM1-214ENST00000485541 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
SRRM1-214ENST00000485541 THUMPD2Q9BTF0 503 aaKnown RBP10.03□□□□□ -0.8
SRRM1-214ENST00000485541 HOXB7P09629 217 aa10.02□□□□□ -0.81
SRRM1-214ENST00000485541 PDE4AP27815 886 aa10.02□□□□□ -0.81
SRRM1-214ENST00000485541 ANP32AP39687 249 aaKnown RBP10.02□□□□□ -0.81
SRRM1-214ENST00000485541 FAM161AQ3B820 660 aa10.02□□□□□ -0.81
SRRM1-214ENST00000485541 PLEKHO1Q53GL0 409 aaPredicted RBP10.02□□□□□ -0.81
SRRM1-214ENST00000485541 NUTM2GQ5VZR2 741 aa10.02□□□□□ -0.81
SRRM1-214ENST00000485541 ITPRIPQ8IWB1 547 aa10.02□□□□□ -0.81
SRRM1-214ENST00000485541 TMEM57Q8N5G2 664 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms