RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 CWC22Q9HCG8 908 aaKnown RBP11.38□□□□□ -0.59
SND1-211ENST00000484767 RGPD1P0DJD0 1748 aa11.38□□□□□ -0.59
SND1-211ENST00000484767 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
SND1-211ENST00000484767 CCDC173Q0VFZ6 552 aa11.37□□□□□ -0.59
SND1-211ENST00000484767 KLHL40Q2TBA0 621 aa11.37□□□□□ -0.59
SND1-211ENST00000484767 NUTM2DQ5VT03 806 aaPredicted RBP11.37□□□□□ -0.59
SND1-211ENST00000484767 MBIPQ9NS73 344 aa11.37□□□□□ -0.59
SND1-211ENST00000484767 CACNA1FO60840 1977 aa11.37□□□□□ -0.59
SND1-211ENST00000484767 ESPNB1AK53 854 aa11.36□□□□□ -0.59
SND1-211ENST00000484767 RAPGEF3O95398 923 aa11.36□□□□□ -0.59
SND1-211ENST00000484767 TTC22Q5TAA0 569 aa11.36□□□□□ -0.59
SND1-211ENST00000484767 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
SND1-211ENST00000484767 ANKRD44Q8N8A2 993 aa11.36□□□□□ -0.59
SND1-211ENST00000484767 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.36□□□□□ -0.59
SND1-211ENST00000484767 PPP1R9BQ96SB3 815 aa11.36□□□□□ -0.59
SND1-211ENST00000484767 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
SND1-211ENST00000484767 TUBGCP6Q96RT7 1819 aa11.36□□□□□ -0.59
SND1-211ENST00000484767 PTPRCP08575 1304 aa11.35□□□□□ -0.59
SND1-211ENST00000484767 FMN2Q9NZ56 1722 aa11.35□□□□□ -0.59
SND1-211ENST00000484767 HS1BP3Q53T59 392 aa11.35□□□□□ -0.59
SND1-211ENST00000484767 PLEKHM2Q8IWE5 1019 aa11.35□□□□□ -0.59
SND1-211ENST00000484767 SIRT2Q8IXJ6 389 aa11.35□□□□□ -0.59
SND1-211ENST00000484767 TRIM44Q96DX7 344 aaPredicted RBP11.35□□□□□ -0.59
SND1-211ENST00000484767 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
SND1-211ENST00000484767 WASLO00401 505 aaPredicted RBP11.34□□□□□ -0.59
SND1-211ENST00000484767 ANP32BQ92688 251 aaKnown RBP11.34□□□□□ -0.59
SND1-211ENST00000484767 COG3Q96JB2 828 aa11.34□□□□□ -0.59
SND1-211ENST00000484767 PHACTR3Q96KR7 559 aa11.34□□□□□ -0.59
SND1-211ENST00000484767 PANK2Q9BZ23 570 aa11.34□□□□□ -0.59
SND1-211ENST00000484767 ZNF445P59923 1031 aa11.33□□□□□ -0.6
SND1-211ENST00000484767 TSPYL6Q8N831 410 aa11.33□□□□□ -0.6
SND1-211ENST00000484767 RGS12O14924 1447 aa11.33□□□□□ -0.6
SND1-211ENST00000484767 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
SND1-211ENST00000484767 ST18O60284 1047 aa11.32□□□□□ -0.6
SND1-211ENST00000484767 HMMRO75330 724 aa11.32□□□□□ -0.6
SND1-211ENST00000484767 REC8O95072 547 aa11.32□□□□□ -0.6
SND1-211ENST00000484767 BAG4O95429 457 aaKnown RBP11.32□□□□□ -0.6
SND1-211ENST00000484767 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
SND1-211ENST00000484767 TPM2P07951 284 aa11.32□□□□□ -0.6
SND1-211ENST00000484767 HDGFP51858 240 aaKnown RBP11.32□□□□□ -0.6
SND1-211ENST00000484767 TERF1P54274 439 aa11.32□□□□□ -0.6
SND1-211ENST00000484767 GLIPR1L2Q4G1C9 344 aa11.32□□□□□ -0.6
SND1-211ENST00000484767 USP26Q9BXU7 913 aa11.32□□□□□ -0.6
SND1-211ENST00000484767 STAG3Q9UJ98 1225 aa11.32□□□□□ -0.6
SND1-211ENST00000484767 RIMS1Q86UR5 1692 aaKnown RBP11.32□□□□□ -0.6
SND1-211ENST00000484767 RTL1A6NKG5 1358 aa11.31□□□□□ -0.6
SND1-211ENST00000484767 EPB41L2O43491 1005 aaKnown RBP11.31□□□□□ -0.6
SND1-211ENST00000484767 RRP9O43818 475 aaKnown RBP11.31□□□□□ -0.6
SND1-211ENST00000484767 HMOX1P09601 288 aa11.31□□□□□ -0.6
SND1-211ENST00000484767 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
SND1-211ENST00000484767 MCM2P49736 904 aa11.31□□□□□ -0.6
SND1-211ENST00000484767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.31□□□□□ -0.66e-7■■□□□ 11.4
SND1-211ENST00000484767 C8orf58Q8NAV2 365 aa11.31□□□□□ -0.6
SND1-211ENST00000484767 GAS2L2Q8NHY3 880 aa11.31□□□□□ -0.6
SND1-211ENST00000484767 NAP1L5Q96NT1 182 aaPredicted RBP11.31□□□□□ -0.6
SND1-211ENST00000484767 OSBPL3Q9H4L5 887 aa11.31□□□□□ -0.6
SND1-211ENST00000484767 CHL1O00533 1208 aa11.3□□□□□ -0.6
SND1-211ENST00000484767 SSFA2P28290 1259 aa11.3□□□□□ -0.6
SND1-211ENST00000484767 EMILIN1Q9Y6C2 1016 aa11.3□□□□□ -0.6
SND1-211ENST00000484767 CCDC61Q9Y6R9 512 aa11.3□□□□□ -0.6
SND1-211ENST00000484767 DDX49Q9Y6V7 483 aaKnown RBP11.3□□□□□ -0.6
SND1-211ENST00000484767 LRRC37A3O60309 1634 aa11.3□□□□□ -0.6
SND1-211ENST00000484767 SOS1Q07889 1333 aaPredicted RBP11.3□□□□□ -0.6
SND1-211ENST00000484767 TTC21BQ7Z4L5 1316 aa11.3□□□□□ -0.6
SND1-211ENST00000484767 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
SND1-211ENST00000484767 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
SND1-211ENST00000484767 SSH2Q76I76 1423 aa11.29□□□□□ -0.6
SND1-211ENST00000484767 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
SND1-211ENST00000484767 NASPP49321 788 aaPredicted RBP11.29□□□□□ -0.6
SND1-211ENST00000484767 CEP85Q6P2H3 762 aa11.29□□□□□ -0.6
SND1-211ENST00000484767 GAS2L3Q86XJ1 694 aa11.29□□□□□ -0.6
SND1-211ENST00000484767 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
SND1-211ENST00000484767 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
SND1-211ENST00000484767 FAM208AQ9UK61 1670 aaKnown RBP11.29□□□□□ -0.6
SND1-211ENST00000484767 AK9Q5TCS8 1911 aa11.29□□□□□ -0.6
SND1-211ENST00000484767 USP54Q70EL1 1684 aa11.28□□□□□ -0.6
SND1-211ENST00000484767 ZSCAN30Q86W11 494 aa11.28□□□□□ -0.6
SND1-211ENST00000484767 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
SND1-211ENST00000484767 IL17RAQ96F46 866 aa11.28□□□□□ -0.6
SND1-211ENST00000484767 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
SND1-211ENST00000484767 XRN1Q8IZH2 1706 aaKnown RBP11.27□□□□□ -0.61
SND1-211ENST00000484767 PEAK1Q9H792 1746 aa11.27□□□□□ -0.61
SND1-211ENST00000484767 ERC2O15083 957 aa11.27□□□□□ -0.61
SND1-211ENST00000484767 CCT4P50991 539 aaKnown RBP11.27□□□□□ -0.61
SND1-211ENST00000484767 NME9Q86XW9 330 aa11.27□□□□□ -0.61
SND1-211ENST00000484767 THUMPD2Q9BTF0 503 aaKnown RBP11.27□□□□□ -0.61
SND1-211ENST00000484767 LMBRD1Q9NUN5 540 aa11.27□□□□□ -0.61
SND1-211ENST00000484767 ZBTB12Q9Y330 459 aaPredicted RBP11.27□□□□□ -0.61
SND1-211ENST00000484767 CRB1P82279 1406 aa11.26□□□□□ -0.61
SND1-211ENST00000484767 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
SND1-211ENST00000484767 PXDNLA1KZ92 1463 aa11.26□□□□□ -0.61
SND1-211ENST00000484767 MBD3O95983 291 aa11.26□□□□□ -0.61
SND1-211ENST00000484767 SDSP20132 328 aa11.26□□□□□ -0.61
SND1-211ENST00000484767 MCM5P33992 734 aa11.26□□□□□ -0.61
SND1-211ENST00000484767 ANAPC15P60006 121 aa11.26□□□□□ -0.61
SND1-211ENST00000484767 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
SND1-211ENST00000484767 WAPLQ7Z5K2 1190 aa11.26□□□□□ -0.61
SND1-211ENST00000484767 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
SND1-211ENST00000484767 AOX1Q06278 1338 aa11.26□□□□□ -0.61
SND1-211ENST00000484767 MSH6P52701 1360 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms