RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 LMOD3Q0VAK6 560 aa18.91■□□□□ 0.62
DDR1-244ENST00000482873 CD2BP2O95400 341 aaKnown RBP18.91■□□□□ 0.62
DDR1-244ENST00000482873 C14orf37Q86TY3 774 aa18.91■□□□□ 0.62
DDR1-244ENST00000482873 KIF2CQ99661 725 aa18.91■□□□□ 0.62
DDR1-244ENST00000482873 SLC4A10Q6U841 1118 aa18.9■□□□□ 0.62
DDR1-244ENST00000482873 CDC42BPGQ6DT37 1551 aa18.9■□□□□ 0.62
DDR1-244ENST00000482873 GBP4Q96PP9 640 aa18.9■□□□□ 0.62
DDR1-244ENST00000482873 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
DDR1-244ENST00000482873 CIZ1Q9ULV3 898 aaPredicted RBP18.9■□□□□ 0.62
DDR1-244ENST00000482873 MAP3K19Q56UN5 1328 aa18.9■□□□□ 0.62
DDR1-244ENST00000482873 F6X3S4 739 aa18.89■□□□□ 0.62
DDR1-244ENST00000482873 ABCC4O15439 1325 aa18.89■□□□□ 0.61
DDR1-244ENST00000482873 SMARCA5O60264 1052 aaPredicted RBP18.89■□□□□ 0.61
DDR1-244ENST00000482873 OTUD7AQ8TE49 926 aaPredicted RBP18.89■□□□□ 0.61
DDR1-244ENST00000482873 EID1Q9Y6B2 187 aa18.89■□□□□ 0.61
DDR1-244ENST00000482873 MTHFSDQ2M296 383 aaKnown RBP18.88■□□□□ 0.61
DDR1-244ENST00000482873 ZNF428Q96B54 188 aa18.88■□□□□ 0.61
DDR1-244ENST00000482873 PTPRUQ92729 1446 aa18.88■□□□□ 0.61
DDR1-244ENST00000482873 REREQ9P2R6 1566 aa18.88■□□□□ 0.61
DDR1-244ENST00000482873 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
DDR1-244ENST00000482873 AMPHP49418 695 aa18.88■□□□□ 0.61
DDR1-244ENST00000482873 ARHGAP45Q92619 1136 aa18.88■□□□□ 0.61
DDR1-244ENST00000482873 ZBTB7CA1YPR0 619 aa18.87■□□□□ 0.61
DDR1-244ENST00000482873 BRPF1P55201 1214 aaPredicted RBP18.87■□□□□ 0.61
DDR1-244ENST00000482873 G2E3Q7L622 706 aa18.87■□□□□ 0.61
DDR1-244ENST00000482873 API5Q9BZZ5 524 aaKnown RBP18.87■□□□□ 0.61
DDR1-244ENST00000482873 SKOR2Q2VWA4 1001 aaPredicted RBP18.86■□□□□ 0.61
DDR1-244ENST00000482873 TBC1D9Q6ZT07 1266 aa18.86■□□□□ 0.61
DDR1-244ENST00000482873 MEIS3Q99687 375 aa18.86■□□□□ 0.61
DDR1-244ENST00000482873 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
DDR1-244ENST00000482873 NLRP6P59044 892 aa18.86■□□□□ 0.61
DDR1-244ENST00000482873 GCC1Q96CN9 775 aa18.86■□□□□ 0.61
DDR1-244ENST00000482873 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.85■□□□□ 0.61
DDR1-244ENST00000482873 CHL1O00533 1208 aa18.85■□□□□ 0.61
DDR1-244ENST00000482873 BMP2KLQ5H9B9 411 aa18.85■□□□□ 0.61
DDR1-244ENST00000482873 SIRT1Q96EB6 747 aa18.85■□□□□ 0.61
DDR1-244ENST00000482873 PTCH1Q13635 1447 aa18.85■□□□□ 0.61
DDR1-244ENST00000482873 PLEKHG3A1L390 1219 aa18.85■□□□□ 0.61
DDR1-244ENST00000482873 USHBP1Q8N6Y0 703 aa18.85■□□□□ 0.61
DDR1-244ENST00000482873 TSPYL4Q9UJ04 414 aa18.85■□□□□ 0.61
DDR1-244ENST00000482873 USP6P35125 1406 aa18.84■□□□□ 0.61
DDR1-244ENST00000482873 TECPR2O15040 1411 aa18.84■□□□□ 0.61
DDR1-244ENST00000482873 RTF1Q92541 710 aaKnown RBP18.84■□□□□ 0.61
DDR1-244ENST00000482873 EYA1Q99502 592 aa18.84■□□□□ 0.61
DDR1-244ENST00000482873 GSPT1P15170 499 aaKnown RBP18.83■□□□□ 0.6
DDR1-244ENST00000482873 K7ELQ4 463 aaPredicted RBP18.82■□□□□ 0.6
DDR1-244ENST00000482873 SSFA2P28290 1259 aa18.82■□□□□ 0.6
DDR1-244ENST00000482873 KCNA6P17658 529 aa18.81■□□□□ 0.6
DDR1-244ENST00000482873 GAS2L2Q8NHY3 880 aa18.81■□□□□ 0.6
DDR1-244ENST00000482873 MSH6P52701 1360 aa18.81■□□□□ 0.6
DDR1-244ENST00000482873 C3P01024 1663 aa18.8■□□□□ 0.6
DDR1-244ENST00000482873 OVOS2A0A0J9YW53 1432 aa18.8■□□□□ 0.6
DDR1-244ENST00000482873 OVOS2Q6IE36 1432 aa18.8■□□□□ 0.6
DDR1-244ENST00000482873 PIK3R4Q99570 1358 aa18.8■□□□□ 0.6
DDR1-244ENST00000482873 FGD1P98174 961 aa18.8■□□□□ 0.6
DDR1-244ENST00000482873 TSHZ3Q63HK5 1081 aa18.8■□□□□ 0.6
DDR1-244ENST00000482873 PLEKHM2Q8IWE5 1019 aa18.8■□□□□ 0.6
DDR1-244ENST00000482873 MON2Q7Z3U7 1717 aa18.8■□□□□ 0.6
DDR1-244ENST00000482873 NASPP49321 788 aaPredicted RBP18.79■□□□□ 0.6
DDR1-244ENST00000482873 PLEKHG1Q9ULL1 1385 aa18.79■□□□□ 0.6
DDR1-244ENST00000482873 UBR1Q8IWV7 1749 aa18.79■□□□□ 0.6
DDR1-244ENST00000482873 PTMSP20962 102 aa18.79■□□□□ 0.6
DDR1-244ENST00000482873 CCDC173Q0VFZ6 552 aa18.78■□□□□ 0.6
DDR1-244ENST00000482873 PPP1R9BQ96SB3 815 aa18.78■□□□□ 0.6
DDR1-244ENST00000482873 CHMP4BQ9H444 224 aaKnown RBP18.78■□□□□ 0.6
DDR1-244ENST00000482873 CEP85Q6P2H3 762 aa18.78■□□□□ 0.6
DDR1-244ENST00000482873 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
DDR1-244ENST00000482873 ITSN1Q15811 1721 aa18.78■□□□□ 0.6
DDR1-244ENST00000482873 INTS3Q68E01 1043 aaKnown RBP18.77■□□□□ 0.6
DDR1-244ENST00000482873 RIMS1Q86UR5 1692 aaKnown RBP18.77■□□□□ 0.6
DDR1-244ENST00000482873 KIAA1211Q6ZU35 1233 aa18.77■□□□□ 0.6
DDR1-244ENST00000482873 DCTPP1Q9H773 170 aa18.77■□□□□ 0.6
DDR1-244ENST00000482873 DDX49Q9Y6V7 483 aaKnown RBP18.77■□□□□ 0.6
DDR1-244ENST00000482873 PEAK1Q9H792 1746 aa18.77■□□□□ 0.59
DDR1-244ENST00000482873 TPM2P07951 284 aa18.77■□□□□ 0.59
DDR1-244ENST00000482873 RBM10P98175 930 aaKnown RBP18.76■□□□□ 0.59
DDR1-244ENST00000482873 KLHL40Q2TBA0 621 aa18.76■□□□□ 0.59
DDR1-244ENST00000482873 BAG4O95429 457 aaKnown RBP18.76■□□□□ 0.59
DDR1-244ENST00000482873 AK9Q5TCS8 1911 aa18.76■□□□□ 0.59
DDR1-244ENST00000482873 CLEC17AQ6ZS10 378 aa18.75■□□□□ 0.59
DDR1-244ENST00000482873 ZSCAN30Q86W11 494 aa18.75■□□□□ 0.59
DDR1-244ENST00000482873 AKAP12Q02952 1782 aa18.75■□□□□ 0.59
DDR1-244ENST00000482873 RGS12O14924 1447 aa18.75■□□□□ 0.59
DDR1-244ENST00000482873 GOLGA6L22H0YM25 854 aa18.75■□□□□ 0.59
DDR1-244ENST00000482873 ANKRD44Q8N8A2 993 aa18.75■□□□□ 0.59
DDR1-244ENST00000482873 EXOC6BQ9Y2D4 811 aa18.75■□□□□ 0.59
DDR1-244ENST00000482873 XPCQ01831 940 aaPredicted RBP18.74■□□□□ 0.59
DDR1-244ENST00000482873 CRB1P82279 1406 aa18.73■□□□□ 0.59
DDR1-244ENST00000482873 RTL1A6NKG5 1358 aa18.73■□□□□ 0.59
DDR1-244ENST00000482873 KNDC1Q76NI1 1749 aa18.73■□□□□ 0.59
DDR1-244ENST00000482873 CDC45O75419 566 aa18.73■□□□□ 0.59
DDR1-244ENST00000482873 FKBP5Q13451 457 aaPredicted RBP18.73■□□□□ 0.59
DDR1-244ENST00000482873 TBX22Q9Y458 520 aa18.73■□□□□ 0.59
DDR1-244ENST00000482873 IBTKQ9P2D0 1353 aaPredicted RBP18.73■□□□□ 0.59
DDR1-244ENST00000482873 PDE4CQ08493 712 aa18.72■□□□□ 0.59
DDR1-244ENST00000482873 THEMISQ8N1K5 641 aaPredicted RBP18.72■□□□□ 0.59
DDR1-244ENST00000482873 FLT4P35916 1363 aa18.72■□□□□ 0.59
DDR1-244ENST00000482873 CEP170BQ9Y4F5 1589 aaPredicted RBP18.72■□□□□ 0.59
DDR1-244ENST00000482873 USP31Q70CQ4 1352 aa18.71■□□□□ 0.59
DDR1-244ENST00000482873 SDSP20132 328 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms